RNA–Protein interactions for RNA: ENST00000511105.1

PTPN13-208, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-208ENST00000511105 RSPH6AQ9H0K4 717 aa8.29□□□□□ -1.08
PTPN13-208ENST00000511105 GGCXP38435 758 aa8.28□□□□□ -1.08
PTPN13-208ENST00000511105 LAPTM4AQ15012 233 aa8.28□□□□□ -1.08
PTPN13-208ENST00000511105 MORN1Q5T089 497 aa8.28□□□□□ -1.08
PTPN13-208ENST00000511105 HLA-CQ95604 372 aa8.28□□□□□ -1.08
PTPN13-208ENST00000511105 SLC27A5Q9Y2P5 690 aa8.28□□□□□ -1.08
PTPN13-208ENST00000511105 ADH1BP00325 375 aa8.27□□□□□ -1.09
PTPN13-208ENST00000511105 PLA2G2CQ5R387 149 aa8.27□□□□□ -1.09
PTPN13-208ENST00000511105 KRI1Q8N9T8 703 aaKnown RBP8.27□□□□□ -1.09
PTPN13-208ENST00000511105 SPSB2Q99619 263 aa8.27□□□□□ -1.09
PTPN13-208ENST00000511105 ATP6V1AP38606 617 aa8.26□□□□□ -1.09
PTPN13-208ENST00000511105 SLC19A1P41440 591 aa8.26□□□□□ -1.09
PTPN13-208ENST00000511105 TRAF7Q6Q0C0 670 aa8.26□□□□□ -1.09
PTPN13-208ENST00000511105 LIAT1Q6ZQX7 453 aa8.26□□□□□ -1.09
PTPN13-208ENST00000511105 IL27Q8NEV9 243 aa8.26□□□□□ -1.09
PTPN13-208ENST00000511105 REPIN1Q9BWE0 567 aaKnown RBP8.26□□□□□ -1.09
PTPN13-208ENST00000511105 SLC6A16Q9GZN6 736 aa8.26□□□□□ -1.09
PTPN13-208ENST00000511105 PDS5BQ9NTI5 1447 aa8.26□□□□□ -1.09
PTPN13-208ENST00000511105 MINK1Q8N4C8 1332 aaPredicted RBP8.26□□□□□ -1.09
PTPN13-208ENST00000511105 TMUB1Q9BVT8 246 aa8.25□□□□□ -1.09
PTPN13-208ENST00000511105 PRDM9Q9NQV7 894 aa8.25□□□□□ -1.09
PTPN13-208ENST00000511105 KIF21AQ7Z4S6 1674 aa8.24□□□□□ -1.09
PTPN13-208ENST00000511105 RNF19BQ6ZMZ0 732 aa8.24□□□□□ -1.09
PTPN13-208ENST00000511105 SULF1Q8IWU6 871 aa8.24□□□□□ -1.09
PTPN13-208ENST00000511105 FAM160A2Q8N612 972 aaPredicted RBP8.24□□□□□ -1.09
PTPN13-208ENST00000511105 PDZRN3Q9UPQ7 1066 aa8.24□□□□□ -1.09
PTPN13-208ENST00000511105 V9GY48 417 aaPredicted RBP8.24□□□□□ -1.09
PTPN13-208ENST00000511105 CCDC88BA6NC98 1476 aa8.24□□□□□ -1.09
PTPN13-208ENST00000511105 CD46P15529 392 aa8.23□□□□□ -1.09
PTPN13-208ENST00000511105 UBTFP17480 764 aaKnown RBP8.23□□□□□ -1.09
PTPN13-208ENST00000511105 GUCA2AQ02747 115 aa8.23□□□□□ -1.09
PTPN13-208ENST00000511105 THAP11Q96EK4 314 aa8.23□□□□□ -1.09
PTPN13-208ENST00000511105 CUX2O14529 1486 aa8.23□□□□□ -1.09
PTPN13-208ENST00000511105 LAMC3Q9Y6N6 1575 aa8.22□□□□□ -1.09
PTPN13-208ENST00000511105 AMHR2Q16671 573 aa8.22□□□□□ -1.09
PTPN13-208ENST00000511105 TOP2AP11388 1531 aaKnown RBP8.21□□□□□ -1.1
PTPN13-208ENST00000511105 DDRGK1Q96HY6 314 aa8.21□□□□□ -1.1
PTPN13-208ENST00000511105 PLEKHG3A1L390 1219 aa8.2□□□□□ -1.1
PTPN13-208ENST00000511105 FMNL1O95466 1100 aaPredicted RBP8.2□□□□□ -1.1
PTPN13-208ENST00000511105 SPRYD7Q5W111 196 aa8.2□□□□□ -1.1
PTPN13-208ENST00000511105 TRIM67Q6ZTA4 783 aa8.2□□□□□ -1.1
PTPN13-208ENST00000511105 ANKLE1Q8NAG6 615 aa8.2□□□□□ -1.1
PTPN13-208ENST00000511105 SYMPKQ92797 1274 aaKnown RBP8.2□□□□□ -1.1
PTPN13-208ENST00000511105 FAM117AQ9C073 453 aa8.2□□□□□ -1.1
PTPN13-208ENST00000511105 PODXL2Q9NZ53 605 aa8.2□□□□□ -1.1
PTPN13-208ENST00000511105 FANCD2Q9BXW9 1451 aa8.19□□□□□ -1.1
PTPN13-208ENST00000511105 TNFRSF10AO00220 468 aa8.19□□□□□ -1.1
PTPN13-208ENST00000511105 KDM4AO75164 1064 aa8.19□□□□□ -1.1
PTPN13-208ENST00000511105 BRICD5Q6PL45 260 aa8.19□□□□□ -1.1
PTPN13-208ENST00000511105 THOC2Q8NI27 1593 aaKnown RBP8.18□□□□□ -1.1
PTPN13-208ENST00000511105 PARP9Q8IXQ6 854 aa8.18□□□□□ -1.1
PTPN13-208ENST00000511105 GPCPD1Q9NPB8 672 aa8.18□□□□□ -1.1
PTPN13-208ENST00000511105 FAM217BQ9NTX9 383 aaPredicted RBP8.18□□□□□ -1.1
PTPN13-208ENST00000511105 FCF1Q9Y324 198 aaKnown RBP8.18□□□□□ -1.1
PTPN13-208ENST00000511105 FOXC1Q12948 553 aa8.17□□□□□ -1.1
PTPN13-208ENST00000511105 ZNF697Q5TEC3 545 aa8.17□□□□□ -1.1
PTPN13-208ENST00000511105 C1orf115Q9H7X2 142 aa8.17□□□□□ -1.1
PTPN13-208ENST00000511105 GOPCQ9HD26 462 aa8.17□□□□□ -1.1
PTPN13-208ENST00000511105 CFTRP13569 1480 aa8.17□□□□□ -1.1
PTPN13-208ENST00000511105 MRC2Q9UBG0 1479 aa8.17□□□□□ -1.1
PTPN13-208ENST00000511105 NRG2O14511 850 aaPredicted RBP8.16□□□□□ -1.1
PTPN13-208ENST00000511105 SSTR3P32745 418 aaPredicted RBP8.16□□□□□ -1.1
PTPN13-208ENST00000511105 CLCN1P35523 988 aa8.16□□□□□ -1.1
PTPN13-208ENST00000511105 FLIIQ13045 1269 aa8.16□□□□□ -1.1
PTPN13-208ENST00000511105 CEP164Q9UPV0 1460 aa8.16□□□□□ -1.1
PTPN13-208ENST00000511105 TTLL12Q14166 644 aaPredicted RBP8.15□□□□□ -1.1
PTPN13-208ENST00000511105 ZNF598Q86UK7 904 aaKnown RBP8.15□□□□□ -1.1
PTPN13-208ENST00000511105 NDUFV2P19404 249 aa8.14□□□□□ -1.11
PTPN13-208ENST00000511105 GRIPAP1Q4V328 841 aa8.14□□□□□ -1.11
PTPN13-208ENST00000511105 URB2Q14146 1524 aaKnown RBP8.13□□□□□ -1.11
PTPN13-208ENST00000511105 HOXA2O43364 376 aa8.13□□□□□ -1.11
PTPN13-208ENST00000511105 NUTM1Q86Y26 1132 aa8.13□□□□□ -1.11
PTPN13-208ENST00000511105 CCDC24Q8N4L8 307 aa8.12□□□□□ -1.11
PTPN13-208ENST00000511105 GDF9O60383 454 aa8.11□□□□□ -1.11
PTPN13-208ENST00000511105 ZNF787Q6DD87 383 aa8.11□□□□□ -1.11
PTPN13-208ENST00000511105 PCDHGC3Q9UN70 934 aa8.11□□□□□ -1.11
PTPN13-208ENST00000511105 GIGYF2Q6Y7W6 1299 aaKnown RBP8.1□□□□□ -1.11
PTPN13-208ENST00000511105 SPIRE2Q8WWL2 714 aa8.1□□□□□ -1.11
PTPN13-208ENST00000511105 USB1Q9BQ65 265 aaKnown RBP8.1□□□□□ -1.11
PTPN13-208ENST00000511105 PKD2L1Q9P0L9 805 aa8.1□□□□□ -1.11
PTPN13-208ENST00000511105 SALL2Q9Y467 1007 aaPredicted RBP8.1□□□□□ -1.11
PTPN13-208ENST00000511105 Q3C1V9 767 aa8.09□□□□□ -1.11
PTPN13-208ENST00000511105 ZNF775Q96BV0 537 aaPredicted RBP8.09□□□□□ -1.11
PTPN13-208ENST00000511105 WDR62O43379 1518 aa8.08□□□□□ -1.12
PTPN13-208ENST00000511105 FAM187AA6NFU0 413 aa8.08□□□□□ -1.12
PTPN13-208ENST00000511105 MOXD2PA6NHM9 499 aa8.08□□□□□ -1.12
PTPN13-208ENST00000511105 A6NJR5 290 aa8.08□□□□□ -1.12
PTPN13-208ENST00000511105 TRIM26Q12899 539 aaPredicted RBP8.08□□□□□ -1.12
PTPN13-208ENST00000511105 BEGAINQ9BUH8 593 aa8.08□□□□□ -1.12
PTPN13-208ENST00000511105 ZNF608Q9ULD9 1512 aaPredicted RBP8.08□□□□□ -1.12
PTPN13-208ENST00000511105 C6orf229H3BNL8 230 aa8.07□□□□□ -1.12
PTPN13-208ENST00000511105 FDX1P10109 184 aa8.07□□□□□ -1.12
PTPN13-208ENST00000511105 MS4A1P11836 297 aa8.07□□□□□ -1.12
PTPN13-208ENST00000511105 USP46P62068 366 aa8.07□□□□□ -1.12
PTPN13-208ENST00000511105 MSS51Q4VC12 460 aa8.07□□□□□ -1.12
PTPN13-208ENST00000511105 PKDCCQ504Y2 493 aa8.07□□□□□ -1.12
PTPN13-208ENST00000511105 ZBTB24O43167 697 aaPredicted RBP8.06□□□□□ -1.12
PTPN13-208ENST00000511105 CD2BP2O95400 341 aaKnown RBP8.06□□□□□ -1.12
PTPN13-208ENST00000511105 AQRO60306 1485 aaKnown RBP eCLIP8.06□□□□□ -1.12
PTPN13-208ENST00000511105 RAD54L2Q9Y4B4 1467 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms