RNA–Protein interactions for RNA: ENST00000511097.6

CAST-235, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 1,399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-235ENST00000511097 PRAM1Q96QH2 718 aa24.63■■□□□ 1.53
CAST-235ENST00000511097 JCADQ9P266 1359 aa24.62■■□□□ 1.53
CAST-235ENST00000511097 COL16A1Q07092 1604 aaPredicted RBP24.61■■□□□ 1.53
CAST-235ENST00000511097 PHLPP1O60346 1717 aa24.61■■□□□ 1.53
CAST-235ENST00000511097 NEUROD1Q13562 356 aa24.6■■□□□ 1.53
CAST-235ENST00000511097 POGKQ9P215 609 aa24.6■■□□□ 1.53
CAST-235ENST00000511097 TRAK1Q9UPV9 953 aa24.6■■□□□ 1.53
CAST-235ENST00000511097 MED1Q15648 1581 aaPredicted RBP24.6■■□□□ 1.53
CAST-235ENST00000511097 KIAA1210Q9ULL0 1709 aa24.6■■□□□ 1.53
CAST-235ENST00000511097 ORAI2Q96SN7 254 aa24.56■■□□□ 1.52
CAST-235ENST00000511097 NHSL1Q5SYE7 1610 aa24.55■■□□□ 1.52
CAST-235ENST00000511097 LRRC59Q96AG4 307 aaKnown RBP24.54■■□□□ 1.52
CAST-235ENST00000511097 ADGRB2O60241 1585 aa24.53■■□□□ 1.52
CAST-235ENST00000511097 SPATA31A6Q5VVP1 1343 aa24.53■■□□□ 1.52
CAST-235ENST00000511097 SAFB2Q14151 953 aaKnown RBP eCLIP24.53■■□□□ 1.52
CAST-235ENST00000511097 ESCO1Q5FWF5 840 aa24.53■■□□□ 1.52
CAST-235ENST00000511097 PCGF6Q9BYE7 350 aa24.52■■□□□ 1.52
CAST-235ENST00000511097 SOS2Q07890 1332 aaPredicted RBP24.51■■□□□ 1.51
CAST-235ENST00000511097 NBPF1Q3BBV0 1214 aa24.51■■□□□ 1.51
CAST-235ENST00000511097 FMN2Q9NZ56 1722 aa24.5■■□□□ 1.51
CAST-235ENST00000511097 NPHP3Q7Z494 1330 aa24.5■■□□□ 1.51
CAST-235ENST00000511097 EIF3AQ14152 1382 aaKnown RBP24.49■■□□□ 1.51
CAST-235ENST00000511097 TONSLQ96HA7 1378 aa24.49■■□□□ 1.51
CAST-235ENST00000511097 ANKARQ7Z5J8 1434 aa24.48■■□□□ 1.51
CAST-235ENST00000511097 DDX17Q92841 729 aaKnown RBP24.47■■□□□ 1.51
CAST-235ENST00000511097 ARHGEF28Q8N1W1 1705 aaKnown RBP24.47■■□□□ 1.51
CAST-235ENST00000511097 SHPRHQ149N8 1683 aa24.46■■□□□ 1.51
CAST-235ENST00000511097 NUTM2FA1L443 756 aa24.46■■□□□ 1.51
CAST-235ENST00000511097 PHF23Q9BUL5 403 aaPredicted RBP24.46■■□□□ 1.51
CAST-235ENST00000511097 MINK1Q8N4C8 1332 aaPredicted RBP24.45■■□□□ 1.5
CAST-235ENST00000511097 CLSPNQ9HAW4 1339 aa24.45■■□□□ 1.5
CAST-235ENST00000511097 WASLO00401 505 aaPredicted RBP24.44■■□□□ 1.5
CAST-235ENST00000511097 FOXO3O43524 673 aa24.43■■□□□ 1.5
CAST-235ENST00000511097 HIRIP3Q9BW71 556 aaPredicted RBP24.43■■□□□ 1.5
CAST-235ENST00000511097 KIF1AQ12756 1690 aa24.42■■□□□ 1.5
CAST-235ENST00000511097 ROCK2O75116 1388 aaKnown RBP24.42■■□□□ 1.5
CAST-235ENST00000511097 PNPLA6Q8IY17 1366 aa24.42■■□□□ 1.5
CAST-235ENST00000511097 TRPM1Q7Z4N2 1603 aa24.42■■□□□ 1.5
CAST-235ENST00000511097 PHF8Q9UPP1 1060 aa24.42■■□□□ 1.5
CAST-235ENST00000511097 PXDNQ92626 1479 aa24.41■■□□□ 1.5
CAST-235ENST00000511097 TULP4Q9NRJ4 1543 aa24.41■■□□□ 1.5
CAST-235ENST00000511097 GPRASP1Q5JY77 1395 aa24.4■■□□□ 1.5
CAST-235ENST00000511097 CENPJQ9HC77 1338 aaPredicted RBP24.4■■□□□ 1.5
CAST-235ENST00000511097 NBPF8Q3BBV2 869 aa24.39■■□□□ 1.49
CAST-235ENST00000511097 LRP6O75581 1613 aa24.37■■□□□ 1.49
CAST-235ENST00000511097 PRR36Q9H6K5 1346 aa24.36■■□□□ 1.49
CAST-235ENST00000511097 USP32Q8NFA0 1604 aa24.36■■□□□ 1.49
CAST-235ENST00000511097 ILDR2Q71H61 639 aa24.35■■□□□ 1.49
CAST-235ENST00000511097 PSME1Q06323 249 aa24.34■■□□□ 1.49
CAST-235ENST00000511097 RGS17Q9UGC6 210 aaPredicted RBP24.34■■□□□ 1.49
CAST-235ENST00000511097 TIMELESSQ9UNS1 1208 aa24.34■■□□□ 1.49
CAST-235ENST00000511097 CDK19Q9BWU1 502 aa24.33■■□□□ 1.49
CAST-235ENST00000511097 ATP7BP35670 1465 aa24.33■■□□□ 1.48
CAST-235ENST00000511097 RALGAPBQ86X10 1494 aa24.33■■□□□ 1.48
CAST-235ENST00000511097 MEX3CQ5U5Q3 659 aaKnown RBP24.32■■□□□ 1.48
CAST-235ENST00000511097 KRT28Q7Z3Y7 464 aa24.32■■□□□ 1.48
CAST-235ENST00000511097 SPATA31A3Q5VYP0 1347 aa24.31■■□□□ 1.48
CAST-235ENST00000511097 XPCQ01831 940 aaPredicted RBP24.31■■□□□ 1.48
CAST-235ENST00000511097 NUDT16Q96DE0 195 aaKnown RBP24.31■■□□□ 1.48
CAST-235ENST00000511097 SBNO1A3KN83 1393 aa24.31■■□□□ 1.48
CAST-235ENST00000511097 COL22A1Q8NFW1 1626 aaPredicted RBP24.3■■□□□ 1.48
CAST-235ENST00000511097 NUTM2BA6NNL0 878 aaPredicted RBP24.29■■□□□ 1.48
CAST-235ENST00000511097 NUTM2EB1AL46 878 aaPredicted RBP24.29■■□□□ 1.48
CAST-235ENST00000511097 NUTM2AQ8IVF1 878 aaPredicted RBP24.29■■□□□ 1.48
CAST-235ENST00000511097 PMFBP1Q8TBY8 1022 aa24.29■■□□□ 1.48
CAST-235ENST00000511097 CCDC61Q9Y6R9 512 aa24.29■■□□□ 1.48
CAST-235ENST00000511097 CARD11Q9BXL7 1154 aa24.29■■□□□ 1.48
CAST-235ENST00000511097 RGPD8O14715 1765 aaPredicted RBP24.28■■□□□ 1.48
CAST-235ENST00000511097 TNS3Q68CZ2 1445 aa24.27■■□□□ 1.48
CAST-235ENST00000511097 ZNF772Q68DY9 489 aaPredicted RBP24.26■■□□□ 1.47
CAST-235ENST00000511097 SBNO2Q9Y2G9 1366 aa24.26■■□□□ 1.47
CAST-235ENST00000511097 NGDNQ8NEJ9 315 aaKnown RBP24.25■■□□□ 1.47
CAST-235ENST00000511097 ARHGEF10O15013 1369 aa24.25■■□□□ 1.47
CAST-235ENST00000511097 QRICH2Q9H0J4 1663 aa24.25■■□□□ 1.47
CAST-235ENST00000511097 EVC2Q86UK5 1308 aa24.24■■□□□ 1.47
CAST-235ENST00000511097 PLEKHG3A1L390 1219 aa24.24■■□□□ 1.47
CAST-235ENST00000511097 SRPK2P78362 688 aaKnown RBP24.24■■□□□ 1.47
CAST-235ENST00000511097 ITSN1Q15811 1721 aa24.23■■□□□ 1.47
CAST-235ENST00000511097 POLR3AO14802 1390 aaPredicted RBP24.23■■□□□ 1.47
CAST-235ENST00000511097 POTEAQ6S8J7 498 aa24.21■■□□□ 1.47
CAST-235ENST00000511097 TOPAZ1Q8N9V7 1692 aa24.2■■□□□ 1.46
CAST-235ENST00000511097 ADAMTS2O95450 1211 aa24.19■■□□□ 1.46
CAST-235ENST00000511097 CCER1Q8TC90 406 aaPredicted RBP24.19■■□□□ 1.46
CAST-235ENST00000511097 C8orf37Q96NL8 207 aa24.19■■□□□ 1.46
CAST-235ENST00000511097 CABP2Q9NPB3 220 aa24.18■■□□□ 1.46
CAST-235ENST00000511097 AFF2P51816 1311 aa24.18■■□□□ 1.46
CAST-235ENST00000511097 SOCS7O14512 581 aa24.17■■□□□ 1.46
CAST-235ENST00000511097 ACEP12821 1306 aa24.17■■□□□ 1.46
CAST-235ENST00000511097 PPIP5K1Q6PFW1 1433 aa24.17■■□□□ 1.46
CAST-235ENST00000511097 TRPM3Q9HCF6 1732 aaPredicted RBP24.16■■□□□ 1.46
CAST-235ENST00000511097 NGLY1Q96IV0 654 aa24.16■■□□□ 1.46
CAST-235ENST00000511097 SLC24A1O60721 1099 aa24.15■■□□□ 1.46
CAST-235ENST00000511097 FNBP4Q8N3X1 1017 aaPredicted RBP24.15■■□□□ 1.46
CAST-235ENST00000511097 BRD4O60885 1362 aaPredicted RBP24.14■■□□□ 1.46
CAST-235ENST00000511097 LMOD2Q6P5Q4 547 aa24.14■■□□□ 1.45
CAST-235ENST00000511097 ATAD2Q6PL18 1390 aa24.14■■□□□ 1.45
CAST-235ENST00000511097 ALS2Q96Q42 1657 aa24.11■■□□□ 1.45
CAST-235ENST00000511097 CABP1Q9NZU7 370 aa24.11■■□□□ 1.45
CAST-235ENST00000511097 PAK3O75914 559 aaPredicted RBP24.1■■□□□ 1.45
CAST-235ENST00000511097 HAP1P54257 671 aaPredicted RBP24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms