RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 NHSL1Q5SYE7 1610 aa12.4□□□□□ -0.42
TRIO-217ENST00000511019 CDK12Q9NYV4 1490 aaPredicted RBP12.4□□□□□ -0.42
TRIO-217ENST00000511019 CCDC144AA2RUR9 1427 aa12.4□□□□□ -0.42
TRIO-217ENST00000511019 FOXO3O43524 673 aa12.4□□□□□ -0.42
TRIO-217ENST00000511019 TMEM132EQ6IEE7 984 aa12.4□□□□□ -0.42
TRIO-217ENST00000511019 SETD1AO15047 1707 aaKnown RBP12.4□□□□□ -0.43
TRIO-217ENST00000511019 NPHP3Q7Z494 1330 aa12.39□□□□□ -0.43
TRIO-217ENST00000511019 ACIN1Q9UKV3 1341 aaKnown RBP12.39□□□□□ -0.43
TRIO-217ENST00000511019 NUTM2FA1L443 756 aa12.39□□□□□ -0.43
TRIO-217ENST00000511019 FNBP4Q8N3X1 1017 aaPredicted RBP12.39□□□□□ -0.43
TRIO-217ENST00000511019 TRPC5Q9UL62 973 aaPredicted RBP12.39□□□□□ -0.43
TRIO-217ENST00000511019 ANKRD30BQ9BXX2 1392 aa12.39□□□□□ -0.43
TRIO-217ENST00000511019 NALCNQ8IZF0 1738 aa12.39□□□□□ -0.43
TRIO-217ENST00000511019 PRAG1Q86YV5 1406 aa12.38□□□□□ -0.43
TRIO-217ENST00000511019 LRPPRCP42704 1394 aaKnown RBP12.38□□□□□ -0.43
TRIO-217ENST00000511019 XPCQ01831 940 aaPredicted RBP12.37□□□□□ -0.43
TRIO-217ENST00000511019 SIRT1Q96EB6 747 aa12.37□□□□□ -0.43
TRIO-217ENST00000511019 ABCC11Q96J66 1382 aa12.37□□□□□ -0.43
TRIO-217ENST00000511019 C14orf93Q9H972 538 aaKnown RBP12.35□□□□□ -0.43
TRIO-217ENST00000511019 SPATA31E1Q6ZUB1 1445 aa12.35□□□□□ -0.43
TRIO-217ENST00000511019 PPLO60437 1756 aa12.33□□□□□ -0.44
TRIO-217ENST00000511019 CFAP70Q5T0N1 1121 aa12.33□□□□□ -0.44
TRIO-217ENST00000511019 KRT28Q7Z3Y7 464 aa12.33□□□□□ -0.44
TRIO-217ENST00000511019 RGS12O14924 1447 aa12.33□□□□□ -0.44
TRIO-217ENST00000511019 LAMC1P11047 1609 aa12.33□□□□□ -0.44
TRIO-217ENST00000511019 DHX57Q6P158 1386 aaKnown RBP12.32□□□□□ -0.44
TRIO-217ENST00000511019 PLEKHH1Q9ULM0 1364 aa12.32□□□□□ -0.44
TRIO-217ENST00000511019 PSME1Q06323 249 aa12.32□□□□□ -0.44
TRIO-217ENST00000511019 ATAD2Q6PL18 1390 aa12.31□□□□□ -0.44
TRIO-217ENST00000511019 TECPR2O15040 1411 aa12.31□□□□□ -0.44
TRIO-217ENST00000511019 YTHDC2Q9H6S0 1430 aaKnown RBP12.31□□□□□ -0.44
TRIO-217ENST00000511019 GJD4Q96KN9 370 aaPredicted RBP12.31□□□□□ -0.44
TRIO-217ENST00000511019 SPATA31A3Q5VYP0 1347 aa12.31□□□□□ -0.44
TRIO-217ENST00000511019 HAP1P54257 671 aaPredicted RBP12.3□□□□□ -0.44
TRIO-217ENST00000511019 POGKQ9P215 609 aa12.3□□□□□ -0.44
TRIO-217ENST00000511019 PHF8Q9UPP1 1060 aa12.3□□□□□ -0.44
TRIO-217ENST00000511019 CDC42BPGQ6DT37 1551 aa12.3□□□□□ -0.44
TRIO-217ENST00000511019 PIK3C2GO75747 1445 aa12.29□□□□□ -0.44
TRIO-217ENST00000511019 PXDNQ92626 1479 aa12.29□□□□□ -0.44
TRIO-217ENST00000511019 CCDC125Q86Z20 511 aa12.29□□□□□ -0.44
TRIO-217ENST00000511019 UNC5CLQ8IV45 518 aa12.29□□□□□ -0.44
TRIO-217ENST00000511019 PRAM1Q96QH2 718 aa12.29□□□□□ -0.44
TRIO-217ENST00000511019 ATRNO75882 1429 aa12.28□□□□□ -0.44
TRIO-217ENST00000511019 BCL9LQ86UU0 1499 aa12.28□□□□□ -0.44
TRIO-217ENST00000511019 SAFB2Q14151 953 aaKnown RBP eCLIP12.28□□□□□ -0.44
TRIO-217ENST00000511019 LMOD2Q6P5Q4 547 aa12.28□□□□□ -0.44
TRIO-217ENST00000511019 MYOM2P54296 1465 aa12.27□□□□□ -0.44
TRIO-217ENST00000511019 PLEKHG5O94827 1062 aa12.27□□□□□ -0.45
TRIO-217ENST00000511019 COL22A1Q8NFW1 1626 aaPredicted RBP12.26□□□□□ -0.45
TRIO-217ENST00000511019 CABLES1Q8TDN4 633 aa12.26□□□□□ -0.45
TRIO-217ENST00000511019 KDM2AQ9Y2K7 1162 aa12.26□□□□□ -0.45
TRIO-217ENST00000511019 PMFBP1Q8TBY8 1022 aa12.25□□□□□ -0.45
TRIO-217ENST00000511019 ZRANB1Q9UGI0 708 aa12.25□□□□□ -0.45
TRIO-217ENST00000511019 TRAK1Q9UPV9 953 aa12.25□□□□□ -0.45
TRIO-217ENST00000511019 DCAF11Q8TEB1 546 aa12.24□□□□□ -0.45
TRIO-217ENST00000511019 STAC3Q96MF2 364 aa12.24□□□□□ -0.45
TRIO-217ENST00000511019 CCDC9Q9Y3X0 531 aaKnown RBP12.24□□□□□ -0.45
TRIO-217ENST00000511019 RAB3GAP2Q9H2M9 1393 aa12.23□□□□□ -0.45
TRIO-217ENST00000511019 IFT172Q9UG01 1749 aa12.23□□□□□ -0.45
TRIO-217ENST00000511019 NRXN1Q9ULB1 1477 aa12.22□□□□□ -0.45
TRIO-217ENST00000511019 SBNO1A3KN83 1393 aa12.22□□□□□ -0.45
TRIO-217ENST00000511019 VPS72Q15906 364 aa12.22□□□□□ -0.45
TRIO-217ENST00000511019 MINK1Q8N4C8 1332 aaPredicted RBP12.21□□□□□ -0.45
TRIO-217ENST00000511019 KNDC1Q76NI1 1749 aa12.21□□□□□ -0.45
TRIO-217ENST00000511019 FMN2Q9NZ56 1722 aa12.21□□□□□ -0.45
TRIO-217ENST00000511019 FAM83GA6ND36 823 aa12.21□□□□□ -0.45
TRIO-217ENST00000511019 SEPT12Q8IYM1 358 aa12.21□□□□□ -0.45
TRIO-217ENST00000511019 HIRIP3Q9BW71 556 aaPredicted RBP12.21□□□□□ -0.45
TRIO-217ENST00000511019 SLIT2O94813 1529 aa12.21□□□□□ -0.46
TRIO-217ENST00000511019 ARHGEF10O15013 1369 aa12.2□□□□□ -0.46
TRIO-217ENST00000511019 ONECUT3O60422 494 aaPredicted RBP12.2□□□□□ -0.46
TRIO-217ENST00000511019 HRCP23327 699 aa12.2□□□□□ -0.46
TRIO-217ENST00000511019 SF3B2Q13435 895 aaKnown RBP12.2□□□□□ -0.46
TRIO-217ENST00000511019 TNS3Q68CZ2 1445 aa12.2□□□□□ -0.46
TRIO-217ENST00000511019 KIF1AQ12756 1690 aa12.19□□□□□ -0.46
TRIO-217ENST00000511019 GPRASP1Q5JY77 1395 aa12.19□□□□□ -0.46
TRIO-217ENST00000511019 WASLO00401 505 aaPredicted RBP12.19□□□□□ -0.46
TRIO-217ENST00000511019 NGDNQ8NEJ9 315 aaKnown RBP12.19□□□□□ -0.46
TRIO-217ENST00000511019 RALGAPBQ86X10 1494 aa12.19□□□□□ -0.46
TRIO-217ENST00000511019 ANKARQ7Z5J8 1434 aa12.19□□□□□ -0.46
TRIO-217ENST00000511019 EIF3AQ14152 1382 aaKnown RBP12.18□□□□□ -0.46
TRIO-217ENST00000511019 PAK3O75914 559 aaPredicted RBP12.17□□□□□ -0.46
TRIO-217ENST00000511019 KRT27Q7Z3Y8 459 aa12.17□□□□□ -0.46
TRIO-217ENST00000511019 MARF1Q9Y4F3 1742 aaKnown RBP12.17□□□□□ -0.46
TRIO-217ENST00000511019 DLC1Q96QB1 1528 aa12.16□□□□□ -0.46
TRIO-217ENST00000511019 A0A0G2JS52 829 aa12.16□□□□□ -0.46
TRIO-217ENST00000511019 MYT1Q01538 1121 aa12.16□□□□□ -0.46
TRIO-217ENST00000511019 BTG4Q9NY30 223 aa12.16□□□□□ -0.46
TRIO-217ENST00000511019 BLMP54132 1417 aaPredicted RBP12.16□□□□□ -0.46
TRIO-217ENST00000511019 PRR36Q9H6K5 1346 aa12.15□□□□□ -0.46
TRIO-217ENST00000511019 DEFB132Q7Z7B7 95 aa12.15□□□□□ -0.46
TRIO-217ENST00000511019 GLI3P10071 1580 aa12.14□□□□□ -0.47
TRIO-217ENST00000511019 FAM98CQ17RN3 349 aaKnown RBP12.14□□□□□ -0.47
TRIO-217ENST00000511019 NUDT16Q96DE0 195 aaKnown RBP12.14□□□□□ -0.47
TRIO-217ENST00000511019 RGPD8O14715 1765 aaPredicted RBP12.14□□□□□ -0.47
TRIO-217ENST00000511019 USP32Q8NFA0 1604 aa12.14□□□□□ -0.47
TRIO-217ENST00000511019 CDK19Q9BWU1 502 aa12.13□□□□□ -0.47
TRIO-217ENST00000511019 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.13□□□□□ -0.47
TRIO-217ENST00000511019 ADGRB1O14514 1584 aa12.13□□□□□ -0.47
TRIO-217ENST00000511019 PRDM11Q9NQV5 511 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms