RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 SIGLEC1Q9BZZ2 1709 aa18.53■□□□□ 0.56
AP003555.1-202ENST00000511013 NINLQ9Y2I6 1382 aa18.52■□□□□ 0.56
AP003555.1-202ENST00000511013 NEXMIFQ5QGS0 1516 aa18.52■□□□□ 0.56
AP003555.1-202ENST00000511013 CFAP53Q96M91 514 aa18.52■□□□□ 0.55
AP003555.1-202ENST00000511013 NSD2O96028 1365 aa18.52■□□□□ 0.55
AP003555.1-202ENST00000511013 ZFYVE9O95405 1425 aa18.52■□□□□ 0.55
AP003555.1-202ENST00000511013 RUNDC1Q96C34 613 aa18.51■□□□□ 0.55
AP003555.1-202ENST00000511013 SHPRHQ149N8 1683 aa18.51■□□□□ 0.55
AP003555.1-202ENST00000511013 RAPGEF3O95398 923 aa18.5■□□□□ 0.55
AP003555.1-202ENST00000511013 NPM2Q86SE8 214 aaKnown RBP18.5■□□□□ 0.55
AP003555.1-202ENST00000511013 SPINK5Q9NQ38 1064 aaPredicted RBP18.5■□□□□ 0.55
AP003555.1-202ENST00000511013 SLC52A1Q9NWF4 448 aa18.5■□□□□ 0.55
AP003555.1-202ENST00000511013 ARHGEF28Q8N1W1 1705 aaKnown RBP18.5■□□□□ 0.55
AP003555.1-202ENST00000511013 WWC1Q8IX03 1113 aa18.5■□□□□ 0.55
AP003555.1-202ENST00000511013 RICTORQ6R327 1708 aa18.49■□□□□ 0.55
AP003555.1-202ENST00000511013 PDE3AQ14432 1141 aa18.49■□□□□ 0.55
AP003555.1-202ENST00000511013 NCBP3Q53F19 620 aaKnown RBP18.49■□□□□ 0.55
AP003555.1-202ENST00000511013 ANKRD36BQ8N2N9 1353 aa18.48■□□□□ 0.55
AP003555.1-202ENST00000511013 DDRGK1Q96HY6 314 aa18.48■□□□□ 0.55
AP003555.1-202ENST00000511013 WDR63Q8IWG1 891 aa18.46■□□□□ 0.55
AP003555.1-202ENST00000511013 BCAR3O75815 825 aa18.45■□□□□ 0.54
AP003555.1-202ENST00000511013 TULP4Q9NRJ4 1543 aa18.45■□□□□ 0.54
AP003555.1-202ENST00000511013 IDI1Q13907 227 aa18.45■□□□□ 0.54
AP003555.1-202ENST00000511013 CCDC27Q2M243 656 aa18.45■□□□□ 0.54
AP003555.1-202ENST00000511013 TNNT2P45379 298 aaPredicted RBP18.44■□□□□ 0.54
AP003555.1-202ENST00000511013 MTHFSP49914 203 aa18.44■□□□□ 0.54
AP003555.1-202ENST00000511013 AAMPQ13685 434 aa18.43■□□□□ 0.54
AP003555.1-202ENST00000511013 NBR1Q14596 966 aa18.43■□□□□ 0.54
AP003555.1-202ENST00000511013 RTL5Q5HYW3 569 aaPredicted RBP18.43■□□□□ 0.54
AP003555.1-202ENST00000511013 TCP11L2Q8N4U5 519 aa18.43■□□□□ 0.54
AP003555.1-202ENST00000511013 PHF23Q9BUL5 403 aaPredicted RBP18.43■□□□□ 0.54
AP003555.1-202ENST00000511013 DMRT2Q9Y5R5 561 aa18.43■□□□□ 0.54
AP003555.1-202ENST00000511013 IQSEC2Q5JU85 1478 aa18.43■□□□□ 0.54
AP003555.1-202ENST00000511013 FAM161AQ3B820 660 aa18.42■□□□□ 0.54
AP003555.1-202ENST00000511013 CANXP27824 592 aaKnown RBP18.41■□□□□ 0.54
AP003555.1-202ENST00000511013 PREX1Q8TCU6 1659 aa18.41■□□□□ 0.54
AP003555.1-202ENST00000511013 NUTM2DQ5VT03 806 aaPredicted RBP18.4■□□□□ 0.54
AP003555.1-202ENST00000511013 TMEM131LA2VDJ0 1609 aa18.39■□□□□ 0.53
AP003555.1-202ENST00000511013 MYO5BQ9ULV0 1848 aa18.39■□□□□ 0.53
AP003555.1-202ENST00000511013 DEKP35659 375 aaKnown RBP18.38■□□□□ 0.53
AP003555.1-202ENST00000511013 SKAP1Q86WV1 359 aa18.38■□□□□ 0.53
AP003555.1-202ENST00000511013 MYH16Q9H6N6 1097 aa18.38■□□□□ 0.53
AP003555.1-202ENST00000511013 CABP2Q9NPB3 220 aa18.38■□□□□ 0.53
AP003555.1-202ENST00000511013 ATAD2Q6PL18 1390 aa18.38■□□□□ 0.53
AP003555.1-202ENST00000511013 YEATS2Q9ULM3 1422 aa18.37■□□□□ 0.53
AP003555.1-202ENST00000511013 PPM1GO15355 546 aaPredicted RBP18.37■□□□□ 0.53
AP003555.1-202ENST00000511013 NEUROD2Q15784 382 aa18.37■□□□□ 0.53
AP003555.1-202ENST00000511013 ABCC11Q96J66 1382 aa18.37■□□□□ 0.53
AP003555.1-202ENST00000511013 RARSP54136 660 aaKnown RBP18.37■□□□□ 0.53
AP003555.1-202ENST00000511013 TERF2IPQ9NYB0 399 aa18.37■□□□□ 0.53
AP003555.1-202ENST00000511013 CLUAP1Q96AJ1 413 aa18.36■□□□□ 0.53
AP003555.1-202ENST00000511013 RRP7AQ9Y3A4 280 aaKnown RBP18.36■□□□□ 0.53
AP003555.1-202ENST00000511013 U2AF1L5P0DN76 240 aaPredicted RBP18.35■□□□□ 0.53
AP003555.1-202ENST00000511013 SRPK2P78362 688 aaKnown RBP18.35■□□□□ 0.53
AP003555.1-202ENST00000511013 U2AF1Q01081 240 aaKnown RBP eCLIP18.35■□□□□ 0.53
AP003555.1-202ENST00000511013 STK26Q9P289 416 aa18.35■□□□□ 0.53
AP003555.1-202ENST00000511013 USP35Q9P2H5 1018 aa18.35■□□□□ 0.53
AP003555.1-202ENST00000511013 CLTCQ00610 1675 aaKnown RBP18.34■□□□□ 0.53
AP003555.1-202ENST00000511013 C8orf34Q49A92 452 aa18.34■□□□□ 0.53
AP003555.1-202ENST00000511013 ANKRD26Q9UPS8 1709 aa18.34■□□□□ 0.53
AP003555.1-202ENST00000511013 MED14O60244 1454 aa18.34■□□□□ 0.53
AP003555.1-202ENST00000511013 PTPRMP28827 1452 aa18.34■□□□□ 0.53
AP003555.1-202ENST00000511013 PMFBP1Q8TBY8 1022 aa18.33■□□□□ 0.53
AP003555.1-202ENST00000511013 POGKQ9P215 609 aa18.33■□□□□ 0.53
AP003555.1-202ENST00000511013 PPP6R1Q9UPN7 881 aa18.33■□□□□ 0.53
AP003555.1-202ENST00000511013 A0A1W2PP64 1363 aa18.33■□□□□ 0.52
AP003555.1-202ENST00000511013 YTHDC2Q9H6S0 1430 aaKnown RBP18.33■□□□□ 0.52
AP003555.1-202ENST00000511013 ADGRB2O60241 1585 aa18.33■□□□□ 0.52
AP003555.1-202ENST00000511013 CT47B1P0C2W7 299 aaPredicted RBP18.32■□□□□ 0.52
AP003555.1-202ENST00000511013 SAFB2Q14151 953 aaKnown RBP eCLIP18.32■□□□□ 0.52
AP003555.1-202ENST00000511013 COG6Q9Y2V7 657 aa18.32■□□□□ 0.52
AP003555.1-202ENST00000511013 MAPK8IP3Q9UPT6 1336 aa18.32■□□□□ 0.52
AP003555.1-202ENST00000511013 RGS3P49796 1198 aa18.32■□□□□ 0.52
AP003555.1-202ENST00000511013 PANK1Q8TE04 598 aa18.32■□□□□ 0.52
AP003555.1-202ENST00000511013 FRAT1Q92837 279 aaPredicted RBP18.32■□□□□ 0.52
AP003555.1-202ENST00000511013 DAXXQ9UER7 740 aaPredicted RBP18.32■□□□□ 0.52
AP003555.1-202ENST00000511013 IGHDP01880 384 aa18.31■□□□□ 0.52
AP003555.1-202ENST00000511013 BCL11AQ9H165 835 aa18.31■□□□□ 0.52
AP003555.1-202ENST00000511013 HDGFL2Q7Z4V5 671 aaPredicted RBP18.3■□□□□ 0.52
AP003555.1-202ENST00000511013 PRAM1Q96QH2 718 aa18.3■□□□□ 0.52
AP003555.1-202ENST00000511013 PNNQ9H307 717 aaKnown RBP18.3■□□□□ 0.52
AP003555.1-202ENST00000511013 ALKQ9UM73 1620 aa18.29■□□□□ 0.52
AP003555.1-202ENST00000511013 VIRMAQ69YN4 1812 aaKnown RBP18.29■□□□□ 0.52
AP003555.1-202ENST00000511013 MINK1Q8N4C8 1332 aaPredicted RBP18.28■□□□□ 0.52
AP003555.1-202ENST00000511013 REREQ9P2R6 1566 aa18.28■□□□□ 0.52
AP003555.1-202ENST00000511013 STAG3Q9UJ98 1225 aa18.27■□□□□ 0.52
AP003555.1-202ENST00000511013 FYB1O15117 783 aa18.27■□□□□ 0.51
AP003555.1-202ENST00000511013 GGNBP2Q9H3C7 697 aa18.27■□□□□ 0.51
AP003555.1-202ENST00000511013 AGLP35573 1532 aa18.26■□□□□ 0.51
AP003555.1-202ENST00000511013 IL16Q14005 1332 aa18.26■□□□□ 0.51
AP003555.1-202ENST00000511013 LAS1LQ9Y4W2 734 aaKnown RBP18.26■□□□□ 0.51
AP003555.1-202ENST00000511013 COL3A1P02461 1466 aaPredicted RBP18.25■□□□□ 0.51
AP003555.1-202ENST00000511013 U2SURPO15042 1029 aaKnown RBP18.25■□□□□ 0.51
AP003555.1-202ENST00000511013 NEFMP07197 916 aa18.25■□□□□ 0.51
AP003555.1-202ENST00000511013 PLEKHF1Q96S99 279 aa18.25■□□□□ 0.51
AP003555.1-202ENST00000511013 ZMYM3Q14202 1370 aa18.25■□□□□ 0.51
AP003555.1-202ENST00000511013 FBXO31Q5XUX0 539 aaPredicted RBP18.25■□□□□ 0.51
AP003555.1-202ENST00000511013 CDK19Q9BWU1 502 aa18.25■□□□□ 0.51
AP003555.1-202ENST00000511013 CD163L1Q9NR16 1453 aa18.24■□□□□ 0.51
AP003555.1-202ENST00000511013 DLC1Q96QB1 1528 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms