RNA–Protein interactions for RNA: ENST00000510598.5

LEMD2-208, Transcript of LEM domain containing 2, humanhuman

TSL 1 (best)

Gene LEMD2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-208ENST00000510598 EP400Q96L91 3159 aa13.76□□□□□ -0.21
LEMD2-208ENST00000510598 KNDC1Q76NI1 1749 aa13.76□□□□□ -0.21
LEMD2-208ENST00000510598 BCL9LQ86UU0 1499 aa13.75□□□□□ -0.21
LEMD2-208ENST00000510598 SRCAPQ6ZRS2 3230 aa13.75□□□□□ -0.21
LEMD2-208ENST00000510598 ORAI2Q96SN7 254 aa13.75□□□□□ -0.21
LEMD2-208ENST00000510598 IFT172Q9UG01 1749 aa13.73□□□□□ -0.21
LEMD2-208ENST00000510598 VGFO15240 615 aaPredicted RBP13.73□□□□□ -0.21
LEMD2-208ENST00000510598 BRWD3Q6RI45 1802 aa13.73□□□□□ -0.21
LEMD2-208ENST00000510598 NAIPQ13075 1403 aa13.73□□□□□ -0.21
LEMD2-208ENST00000510598 KIF1AQ12756 1690 aa13.72□□□□□ -0.21
LEMD2-208ENST00000510598 RPGRIP1LQ68CZ1 1315 aa13.72□□□□□ -0.21
LEMD2-208ENST00000510598 GLI3P10071 1580 aa13.72□□□□□ -0.21
LEMD2-208ENST00000510598 FOXD1Q16676 465 aa13.72□□□□□ -0.21
LEMD2-208ENST00000510598 FMN2Q9NZ56 1722 aa13.72□□□□□ -0.21
LEMD2-208ENST00000510598 TECPR2O15040 1411 aa13.72□□□□□ -0.21
LEMD2-208ENST00000510598 NPHP3Q7Z494 1330 aa13.71□□□□□ -0.21
LEMD2-208ENST00000510598 CCDC125Q86Z20 511 aa13.71□□□□□ -0.21
LEMD2-208ENST00000510598 USP32Q8NFA0 1604 aa13.7□□□□□ -0.22
LEMD2-208ENST00000510598 RRBP1Q9P2E9 1410 aaKnown RBP13.7□□□□□ -0.22
LEMD2-208ENST00000510598 SLIT2O94813 1529 aa13.69□□□□□ -0.22
LEMD2-208ENST00000510598 ITGAEP38570 1179 aa13.69□□□□□ -0.22
LEMD2-208ENST00000510598 ZRANB1Q9UGI0 708 aa13.69□□□□□ -0.22
LEMD2-208ENST00000510598 NWD2Q9ULI1 1742 aa13.69□□□□□ -0.22
LEMD2-208ENST00000510598 LRP5O75197 1615 aa13.68□□□□□ -0.22
LEMD2-208ENST00000510598 ABCA3Q99758 1704 aa13.68□□□□□ -0.22
LEMD2-208ENST00000510598 LRPPRCP42704 1394 aaKnown RBP13.67□□□□□ -0.22
LEMD2-208ENST00000510598 RALGAPBQ86X10 1494 aa13.67□□□□□ -0.22
LEMD2-208ENST00000510598 PLCH1Q4KWH8 1693 aa13.66□□□□□ -0.22
LEMD2-208ENST00000510598 BLMP54132 1417 aaPredicted RBP13.66□□□□□ -0.22
LEMD2-208ENST00000510598 RGPD8O14715 1765 aaPredicted RBP13.66□□□□□ -0.22
LEMD2-208ENST00000510598 GJD4Q96KN9 370 aaPredicted RBP13.66□□□□□ -0.22
LEMD2-208ENST00000510598 ESCO1Q5FWF5 840 aa13.64□□□□□ -0.23
LEMD2-208ENST00000510598 CCDC144AA2RUR9 1427 aa13.64□□□□□ -0.23
LEMD2-208ENST00000510598 ABCC11Q96J66 1382 aa13.63□□□□□ -0.23
LEMD2-208ENST00000510598 SPATA31E1Q6ZUB1 1445 aa13.63□□□□□ -0.23
LEMD2-208ENST00000510598 FOXO3O43524 673 aa13.62□□□□□ -0.23
LEMD2-208ENST00000510598 UNC5CLQ8IV45 518 aa13.62□□□□□ -0.23
LEMD2-208ENST00000510598 SPATA31A3Q5VYP0 1347 aa13.62□□□□□ -0.23
LEMD2-208ENST00000510598 PIK3C2GO75747 1445 aa13.61□□□□□ -0.23
LEMD2-208ENST00000510598 NRAPQ86VF7 1730 aa13.61□□□□□ -0.23
LEMD2-208ENST00000510598 ANKRD30BQ9BXX2 1392 aa13.6□□□□□ -0.23
LEMD2-208ENST00000510598 ADGRF5Q8IZF2 1346 aa13.6□□□□□ -0.23
LEMD2-208ENST00000510598 TNS3Q68CZ2 1445 aa13.59□□□□□ -0.23
LEMD2-208ENST00000510598 XPCQ01831 940 aaPredicted RBP13.59□□□□□ -0.23
LEMD2-208ENST00000510598 PLEKHH1Q9ULM0 1364 aa13.58□□□□□ -0.23
LEMD2-208ENST00000510598 YTHDC2Q9H6S0 1430 aaKnown RBP13.57□□□□□ -0.24
LEMD2-208ENST00000510598 NRXN1Q9ULB1 1477 aa13.57□□□□□ -0.24
LEMD2-208ENST00000510598 RGPD1P0DJD0 1748 aa13.57□□□□□ -0.24
LEMD2-208ENST00000510598 TRPM3Q9HCF6 1732 aaPredicted RBP13.57□□□□□ -0.24
LEMD2-208ENST00000510598 ONECUT3O60422 494 aaPredicted RBP13.57□□□□□ -0.24
LEMD2-208ENST00000510598 WAPLQ7Z5K2 1190 aa13.57□□□□□ -0.24
LEMD2-208ENST00000510598 SLC4A1APQ9BWU0 796 aaKnown RBP13.57□□□□□ -0.24
LEMD2-208ENST00000510598 SBNO1A3KN83 1393 aa13.57□□□□□ -0.24
LEMD2-208ENST00000510598 CRYBG1Q9Y4K1 1723 aa13.56□□□□□ -0.24
LEMD2-208ENST00000510598 VPS72Q15906 364 aa13.56□□□□□ -0.24
LEMD2-208ENST00000510598 SIRT1Q96EB6 747 aa13.56□□□□□ -0.24
LEMD2-208ENST00000510598 ADGRB2O60241 1585 aa13.56□□□□□ -0.24
LEMD2-208ENST00000510598 ALS2Q96Q42 1657 aa13.56□□□□□ -0.24
LEMD2-208ENST00000510598 DEFB132Q7Z7B7 95 aa13.54□□□□□ -0.24
LEMD2-208ENST00000510598 SEPT12Q8IYM1 358 aa13.54□□□□□ -0.24
LEMD2-208ENST00000510598 DLC1Q96QB1 1528 aa13.54□□□□□ -0.24
LEMD2-208ENST00000510598 TNS1Q9HBL0 1735 aaKnown RBP13.53□□□□□ -0.24
LEMD2-208ENST00000510598 COL14A1Q05707 1796 aaKnown RBP13.53□□□□□ -0.24
LEMD2-208ENST00000510598 NUTM2FA1L443 756 aa13.53□□□□□ -0.24
LEMD2-208ENST00000510598 KRT28Q7Z3Y7 464 aa13.53□□□□□ -0.24
LEMD2-208ENST00000510598 STK26Q9P289 416 aa13.53□□□□□ -0.24
LEMD2-208ENST00000510598 ARHGEF10O15013 1369 aa13.53□□□□□ -0.24
LEMD2-208ENST00000510598 PPARGC1BQ86YN6 1023 aaKnown RBP13.52□□□□□ -0.25
LEMD2-208ENST00000510598 ANKARQ7Z5J8 1434 aa13.52□□□□□ -0.25
LEMD2-208ENST00000510598 THSD7AQ9UPZ6 1657 aa13.52□□□□□ -0.25
LEMD2-208ENST00000510598 TMEM132EQ6IEE7 984 aa13.51□□□□□ -0.25
LEMD2-208ENST00000510598 PHF8Q9UPP1 1060 aa13.51□□□□□ -0.25
LEMD2-208ENST00000510598 DISP2A7MBM2 1401 aa13.5□□□□□ -0.25
LEMD2-208ENST00000510598 PSME1Q06323 249 aa13.5□□□□□ -0.25
LEMD2-208ENST00000510598 SF3B2Q13435 895 aaKnown RBP13.5□□□□□ -0.25
LEMD2-208ENST00000510598 KRT27Q7Z3Y8 459 aa13.5□□□□□ -0.25
LEMD2-208ENST00000510598 C14orf93Q9H972 538 aaKnown RBP13.49□□□□□ -0.25
LEMD2-208ENST00000510598 CABLES1Q8TDN4 633 aa13.48□□□□□ -0.25
LEMD2-208ENST00000510598 ADGRB1O14514 1584 aa13.47□□□□□ -0.25
LEMD2-208ENST00000510598 RGL3Q3MIN7 710 aa13.47□□□□□ -0.25
LEMD2-208ENST00000510598 DHX57Q6P158 1386 aaKnown RBP13.46□□□□□ -0.25
LEMD2-208ENST00000510598 FAM83GA6ND36 823 aa13.46□□□□□ -0.25
LEMD2-208ENST00000510598 BAG6P46379 1132 aa13.46□□□□□ -0.25
LEMD2-208ENST00000510598 HAP1P54257 671 aaPredicted RBP13.46□□□□□ -0.25
LEMD2-208ENST00000510598 TULP4Q9NRJ4 1543 aa13.45□□□□□ -0.26
LEMD2-208ENST00000510598 ITSN1Q15811 1721 aa13.45□□□□□ -0.26
LEMD2-208ENST00000510598 HRCP23327 699 aa13.45□□□□□ -0.26
LEMD2-208ENST00000510598 RREB1Q92766 1687 aa13.44□□□□□ -0.26
LEMD2-208ENST00000510598 PHRF1Q9P1Y6 1649 aaKnown RBP13.44□□□□□ -0.26
LEMD2-208ENST00000510598 MPHOSPH9Q99550 1183 aa13.44□□□□□ -0.26
LEMD2-208ENST00000510598 CCDC9Q9Y3X0 531 aaKnown RBP13.43□□□□□ -0.26
LEMD2-208ENST00000510598 EIF3AQ14152 1382 aaKnown RBP13.43□□□□□ -0.26
LEMD2-208ENST00000510598 SPATA31A5Q5VU36 1347 aa13.42□□□□□ -0.26
LEMD2-208ENST00000510598 SPATA31A7Q8IWB4 1347 aa13.42□□□□□ -0.26
LEMD2-208ENST00000510598 CFAP70Q5T0N1 1121 aa13.42□□□□□ -0.26
LEMD2-208ENST00000510598 PRAM1Q96QH2 718 aa13.42□□□□□ -0.26
LEMD2-208ENST00000510598 PSDA5PKW4 1024 aaPredicted RBP13.41□□□□□ -0.26
LEMD2-208ENST00000510598 FAM98CQ17RN3 349 aaKnown RBP13.41□□□□□ -0.26
LEMD2-208ENST00000510598 BTG4Q9NY30 223 aa13.41□□□□□ -0.26
LEMD2-208ENST00000510598 NUP188Q5SRE5 1749 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms