RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 DDX17Q92841 729 aaKnown RBP33.71■■■□□ 2.99
SNF8-209ENST00000510558 CFAP70Q5T0N1 1121 aa33.7■■■□□ 2.99
SNF8-209ENST00000510558 PLEKHH1Q9ULM0 1364 aa33.68■■■□□ 2.98
SNF8-209ENST00000510558 ORAI2Q96SN7 254 aa33.67■■■□□ 2.98
SNF8-209ENST00000510558 DHX57Q6P158 1386 aaKnown RBP33.66■■■□□ 2.98
SNF8-209ENST00000510558 LRRC59Q96AG4 307 aaKnown RBP33.65■■■□□ 2.98
SNF8-209ENST00000510558 POTEAQ6S8J7 498 aa33.63■■■□□ 2.97
SNF8-209ENST00000510558 MEX3CQ5U5Q3 659 aaKnown RBP33.62■■■□□ 2.97
SNF8-209ENST00000510558 DCAF11Q8TEB1 546 aa33.61■■■□□ 2.97
SNF8-209ENST00000510558 SIRT1Q96EB6 747 aa33.61■■■□□ 2.97
SNF8-209ENST00000510558 KDM2AQ9Y2K7 1162 aa33.61■■■□□ 2.97
SNF8-209ENST00000510558 FMN2Q9NZ56 1722 aa33.6■■■□□ 2.97
SNF8-209ENST00000510558 PNPLA6Q8IY17 1366 aa33.59■■■□□ 2.97
SNF8-209ENST00000510558 ADGRB1O14514 1584 aa33.58■■■□□ 2.97
SNF8-209ENST00000510558 NUTM2BA6NNL0 878 aaPredicted RBP33.57■■■□□ 2.96
SNF8-209ENST00000510558 NUTM2EB1AL46 878 aaPredicted RBP33.57■■■□□ 2.96
SNF8-209ENST00000510558 NUTM2AQ8IVF1 878 aaPredicted RBP33.57■■■□□ 2.96
SNF8-209ENST00000510558 SOS2Q07890 1332 aaPredicted RBP33.56■■■□□ 2.96
SNF8-209ENST00000510558 ESCO1Q5FWF5 840 aa33.56■■■□□ 2.96
SNF8-209ENST00000510558 DLC1Q96QB1 1528 aa33.55■■■□□ 2.96
SNF8-209ENST00000510558 STAC3Q96MF2 364 aa33.55■■■□□ 2.96
SNF8-209ENST00000510558 NUTM2FA1L443 756 aa33.54■■■□□ 2.96
SNF8-209ENST00000510558 PRAM1Q96QH2 718 aa33.51■■■□□ 2.95
SNF8-209ENST00000510558 NPHP3Q7Z494 1330 aa33.51■■■□□ 2.95
SNF8-209ENST00000510558 RGPD8O14715 1765 aaPredicted RBP33.48■■■□□ 2.95
SNF8-209ENST00000510558 SAFB2Q14151 953 aaKnown RBP eCLIP33.48■■■□□ 2.95
SNF8-209ENST00000510558 PXDNQ92626 1479 aa33.47■■■□□ 2.95
SNF8-209ENST00000510558 KIF1AQ12756 1690 aa33.47■■■□□ 2.95
SNF8-209ENST00000510558 ZNF772Q68DY9 489 aaPredicted RBP33.46■■■□□ 2.95
SNF8-209ENST00000510558 POGKQ9P215 609 aa33.46■■■□□ 2.95
SNF8-209ENST00000510558 FOXO3O43524 673 aa33.45■■■□□ 2.95
SNF8-209ENST00000510558 TRAK1Q9UPV9 953 aa33.45■■■□□ 2.95
SNF8-209ENST00000510558 COL22A1Q8NFW1 1626 aaPredicted RBP33.44■■■□□ 2.94
SNF8-209ENST00000510558 ADGRB2O60241 1585 aa33.43■■■□□ 2.94
SNF8-209ENST00000510558 XPCQ01831 940 aaPredicted RBP33.41■■■□□ 2.94
SNF8-209ENST00000510558 AFF2P51816 1311 aa33.39■■■□□ 2.94
SNF8-209ENST00000510558 ARHGEF28Q8N1W1 1705 aaKnown RBP33.38■■■□□ 2.93
SNF8-209ENST00000510558 KIAA1210Q9ULL0 1709 aa33.37■■■□□ 2.93
SNF8-209ENST00000510558 C8orf37Q96NL8 207 aa33.37■■■□□ 2.93
SNF8-209ENST00000510558 USP32Q8NFA0 1604 aa33.35■■■□□ 2.93
SNF8-209ENST00000510558 ADAMTS2O95450 1211 aa33.35■■■□□ 2.93
SNF8-209ENST00000510558 PHF8Q9UPP1 1060 aa33.33■■■□□ 2.93
SNF8-209ENST00000510558 ANKARQ7Z5J8 1434 aa33.33■■■□□ 2.93
SNF8-209ENST00000510558 MINK1Q8N4C8 1332 aaPredicted RBP33.32■■■□□ 2.93
SNF8-209ENST00000510558 HIRIP3Q9BW71 556 aaPredicted RBP33.32■■■□□ 2.92
SNF8-209ENST00000510558 MARF1Q9Y4F3 1742 aaKnown RBP33.28■■■□□ 2.92
SNF8-209ENST00000510558 KRT28Q7Z3Y7 464 aa33.28■■■□□ 2.92
SNF8-209ENST00000510558 NGLY1Q96IV0 654 aa33.28■■■□□ 2.92
SNF8-209ENST00000510558 SPATA31A3Q5VYP0 1347 aa33.27■■■□□ 2.92
SNF8-209ENST00000510558 EIF3AQ14152 1382 aaKnown RBP33.26■■■□□ 2.92
SNF8-209ENST00000510558 RXRBP28702 533 aa33.26■■■□□ 2.91
SNF8-209ENST00000510558 TULP4Q9NRJ4 1543 aa33.26■■■□□ 2.91
SNF8-209ENST00000510558 WASLO00401 505 aaPredicted RBP33.23■■■□□ 2.91
SNF8-209ENST00000510558 TNS3Q68CZ2 1445 aa33.21■■■□□ 2.91
SNF8-209ENST00000510558 CDK12Q9NYV4 1490 aaPredicted RBP33.21■■■□□ 2.91
SNF8-209ENST00000510558 PSME1Q06323 249 aa33.21■■■□□ 2.91
SNF8-209ENST00000510558 PMFBP1Q8TBY8 1022 aa33.21■■■□□ 2.91
SNF8-209ENST00000510558 SIN3AQ96ST3 1273 aa33.21■■■□□ 2.91
SNF8-209ENST00000510558 QTRT2Q9H974 415 aaKnown RBP33.21■■■□□ 2.91
SNF8-209ENST00000510558 PRR36Q9H6K5 1346 aa33.21■■■□□ 2.91
SNF8-209ENST00000510558 NBPF1Q3BBV0 1214 aa33.2■■■□□ 2.91
SNF8-209ENST00000510558 L3MBTL2Q969R5 705 aa33.19■■■□□ 2.9
SNF8-209ENST00000510558 SBNO1A3KN83 1393 aa33.18■■■□□ 2.9
SNF8-209ENST00000510558 FNBP4Q8N3X1 1017 aaPredicted RBP33.17■■■□□ 2.9
SNF8-209ENST00000510558 USP21Q9UK80 565 aa33.17■■■□□ 2.9
SNF8-209ENST00000510558 ITSN1Q15811 1721 aa33.16■■■□□ 2.9
SNF8-209ENST00000510558 RBM6P78332 1123 aaKnown RBP33.15■■■□□ 2.9
SNF8-209ENST00000510558 TRPM3Q9HCF6 1732 aaPredicted RBP33.15■■■□□ 2.9
SNF8-209ENST00000510558 NEUROD1Q13562 356 aa33.13■■■□□ 2.89
SNF8-209ENST00000510558 ATP7BP35670 1465 aa33.12■■■□□ 2.89
SNF8-209ENST00000510558 ABCA3Q99758 1704 aa33.12■■■□□ 2.89
SNF8-209ENST00000510558 ARHGEF10O15013 1369 aa33.11■■■□□ 2.89
SNF8-209ENST00000510558 TRPC5Q9UL62 973 aaPredicted RBP33.1■■■□□ 2.89
SNF8-209ENST00000510558 RGS12O14924 1447 aa33.1■■■□□ 2.89
SNF8-209ENST00000510558 TRPM1Q7Z4N2 1603 aa33.1■■■□□ 2.89
SNF8-209ENST00000510558 GPRASP1Q5JY77 1395 aa33.09■■■□□ 2.89
SNF8-209ENST00000510558 LMOD2Q6P5Q4 547 aa33.09■■■□□ 2.89
SNF8-209ENST00000510558 ALS2Q96Q42 1657 aa33.08■■■□□ 2.89
SNF8-209ENST00000510558 ATRNO75882 1429 aa33.08■■■□□ 2.89
SNF8-209ENST00000510558 BCL9LQ86UU0 1499 aa33.07■■■□□ 2.88
SNF8-209ENST00000510558 NUDT16Q96DE0 195 aaKnown RBP33.07■■■□□ 2.88
SNF8-209ENST00000510558 CDK19Q9BWU1 502 aa33.07■■■□□ 2.88
SNF8-209ENST00000510558 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.06■■■□□ 2.88
SNF8-209ENST00000510558 TOPAZ1Q8N9V7 1692 aa33.06■■■□□ 2.88
SNF8-209ENST00000510558 HAP1P54257 671 aaPredicted RBP33.05■■■□□ 2.88
SNF8-209ENST00000510558 NGDNQ8NEJ9 315 aaKnown RBP33.05■■■□□ 2.88
SNF8-209ENST00000510558 CABLES1Q8TDN4 633 aa33.05■■■□□ 2.88
SNF8-209ENST00000510558 QRICH2Q9H0J4 1663 aa33.04■■■□□ 2.88
SNF8-209ENST00000510558 PLEKHG5O94827 1062 aa33.04■■■□□ 2.88
SNF8-209ENST00000510558 TRIM26Q12899 539 aaPredicted RBP33.04■■■□□ 2.88
SNF8-209ENST00000510558 CENPJQ9HC77 1338 aaPredicted RBP33.03■■■□□ 2.88
SNF8-209ENST00000510558 SLIT2O94813 1529 aa33.02■■■□□ 2.88
SNF8-209ENST00000510558 PLCH1Q4KWH8 1693 aa32.98■■■□□ 2.87
SNF8-209ENST00000510558 UPF1Q92900 1129 aaKnown RBP eCLIP32.97■■■□□ 2.87
SNF8-209ENST00000510558 CCDC61Q9Y6R9 512 aa32.96■■■□□ 2.87
SNF8-209ENST00000510558 NWD2Q9ULI1 1742 aa32.96■■■□□ 2.87
SNF8-209ENST00000510558 CRYBG1Q9Y4K1 1723 aa32.95■■■□□ 2.87
SNF8-209ENST00000510558 UNC5CLQ8IV45 518 aa32.95■■■□□ 2.87
SNF8-209ENST00000510558 ROCK2O75116 1388 aaKnown RBP32.95■■■□□ 2.86
SNF8-209ENST00000510558 PAK3O75914 559 aaPredicted RBP32.94■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms