RNA–Protein interactions for RNA: ENST00000510526.2

HMGB3P3-201, Transcript of high mobility group box 3 pseudogene 3, humanhuman

BASIC

Gene HMGB3P3, Length 400 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P3-201ENST00000510526 WNT7AO00755 349 aa5.51□□□□□ -1.53
HMGB3P3-201ENST00000510526 WIPF1O43516 503 aa5.51□□□□□ -1.53
HMGB3P3-201ENST00000510526 REPIN1Q9BWE0 567 aaKnown RBP5.51□□□□□ -1.53
HMGB3P3-201ENST00000510526 TESPA1A2RU30 521 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P3-201ENST00000510526 FECHP22830 423 aa5.49□□□□□ -1.53
HMGB3P3-201ENST00000510526 NFX1Q12986 1120 aaKnown RBP5.49□□□□□ -1.53
HMGB3P3-201ENST00000510526 TRIM32Q13049 653 aa5.49□□□□□ -1.53
HMGB3P3-201ENST00000510526 RBM26Q5T8P6 1007 aaKnown RBP5.49□□□□□ -1.53
HMGB3P3-201ENST00000510526 ATP13A2Q9NQ11 1180 aa5.49□□□□□ -1.53
HMGB3P3-201ENST00000510526 PRDM9Q9NQV7 894 aa5.49□□□□□ -1.53
HMGB3P3-201ENST00000510526 SMPD1P17405 629 aa5.48□□□□□ -1.53
HMGB3P3-201ENST00000510526 MMP16P51512 607 aa5.48□□□□□ -1.53
HMGB3P3-201ENST00000510526 KIFC2Q96AC6 838 aa5.48□□□□□ -1.53
HMGB3P3-201ENST00000510526 RNF19BQ6ZMZ0 732 aa5.47□□□□□ -1.53
HMGB3P3-201ENST00000510526 TRIM47Q96LD4 638 aa5.47□□□□□ -1.53
HMGB3P3-201ENST00000510526 LOC100996750A0A140TA64 210 aa5.46□□□□□ -1.54
HMGB3P3-201ENST00000510526 TERTO14746 1132 aaKnown RBP5.46□□□□□ -1.54
HMGB3P3-201ENST00000510526 GPR37O15354 613 aa5.46□□□□□ -1.54
HMGB3P3-201ENST00000510526 WNT7BP56706 349 aa5.46□□□□□ -1.54
HMGB3P3-201ENST00000510526 MRGPRX2Q96LB1 330 aa5.46□□□□□ -1.54
HMGB3P3-201ENST00000510526 USB1Q9BQ65 265 aaKnown RBP5.46□□□□□ -1.54
HMGB3P3-201ENST00000510526 KRTAP4-6Q9BYQ5 205 aa5.46□□□□□ -1.54
HMGB3P3-201ENST00000510526 FAM181BA6NEQ2 426 aa5.45□□□□□ -1.54
HMGB3P3-201ENST00000510526 DXOO77932 396 aaKnown RBP5.45□□□□□ -1.54
HMGB3P3-201ENST00000510526 NLRP7Q8WX94 980 aa5.45□□□□□ -1.54
HMGB3P3-201ENST00000510526 J3QL48 77 aa5.44□□□□□ -1.54
HMGB3P3-201ENST00000510526 USP46P62068 366 aa5.44□□□□□ -1.54
HMGB3P3-201ENST00000510526 SLC16A10Q8TF71 515 aa5.44□□□□□ -1.54
HMGB3P3-201ENST00000510526 PHOX2BQ99453 314 aa5.44□□□□□ -1.54
HMGB3P3-201ENST00000510526 KDM4AO75164 1064 aa5.43□□□□□ -1.54
HMGB3P3-201ENST00000510526 SNRPBP14678 240 aaKnown RBP5.43□□□□□ -1.54
HMGB3P3-201ENST00000510526 CD46P15529 392 aa5.43□□□□□ -1.54
HMGB3P3-201ENST00000510526 GPIHBP1Q8IV16 184 aa5.43□□□□□ -1.54
HMGB3P3-201ENST00000510526 RC3H1Q5TC82 1133 aaKnown RBP5.42□□□□□ -1.54
HMGB3P3-201ENST00000510526 CCDC24Q8N4L8 307 aa5.42□□□□□ -1.54
HMGB3P3-201ENST00000510526 HPS1Q92902 700 aa5.42□□□□□ -1.54
HMGB3P3-201ENST00000510526 NPAS3Q8IXF0 933 aa5.41□□□□□ -1.54
HMGB3P3-201ENST00000510526 ALDH1A1P00352 501 aa5.39□□□□□ -1.55
HMGB3P3-201ENST00000510526 SKOR1P84550 965 aa5.39□□□□□ -1.55
HMGB3P3-201ENST00000510526 MAP2K5Q13163 448 aa5.39□□□□□ -1.55
HMGB3P3-201ENST00000510526 IRF7Q92985 503 aa5.39□□□□□ -1.55
HMGB3P3-201ENST00000510526 NXF1Q9UBU9 619 aaKnown RBP5.39□□□□□ -1.55
HMGB3P3-201ENST00000510526 TULP1O00294 542 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P3-201ENST00000510526 JUNDP17535 347 aa5.38□□□□□ -1.55
HMGB3P3-201ENST00000510526 EHBP1Q8NDI1 1231 aa5.38□□□□□ -1.55
HMGB3P3-201ENST00000510526 WASF2Q9Y6W5 498 aa5.38□□□□□ -1.55
HMGB3P3-201ENST00000510526 CAPN5O15484 640 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P3-201ENST00000510526 HOXA2O43364 376 aa5.37□□□□□ -1.55
HMGB3P3-201ENST00000510526 RETREG3Q86VR2 466 aa5.37□□□□□ -1.55
HMGB3P3-201ENST00000510526 IRF6O14896 467 aa5.36□□□□□ -1.55
HMGB3P3-201ENST00000510526 LCE2CQ5TA81 110 aa5.36□□□□□ -1.55
HMGB3P3-201ENST00000510526 ZSCAN1Q8NBB4 408 aa5.36□□□□□ -1.55
HMGB3P3-201ENST00000510526 NUDT12Q9BQG2 462 aa5.36□□□□□ -1.55
HMGB3P3-201ENST00000510526 MINK1Q8N4C8 1332 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P3-201ENST00000510526 SIAH2O43255 324 aa5.35□□□□□ -1.55
HMGB3P3-201ENST00000510526 MDM2Q00987 491 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P3-201ENST00000510526 PLEKHG3A1L390 1219 aa5.34□□□□□ -1.55
HMGB3P3-201ENST00000510526 CLCN1P35523 988 aa5.34□□□□□ -1.55
HMGB3P3-201ENST00000510526 NUTM1Q86Y26 1132 aa5.34□□□□□ -1.55
HMGB3P3-201ENST00000510526 HLA-CQ95604 372 aa5.34□□□□□ -1.55
HMGB3P3-201ENST00000510526 CCNYL3P0C7X3 344 aa5.33□□□□□ -1.56
HMGB3P3-201ENST00000510526 MS4A1P11836 297 aa5.33□□□□□ -1.56
HMGB3P3-201ENST00000510526 GMPRP36959 345 aa5.33□□□□□ -1.56
HMGB3P3-201ENST00000510526 KRI1Q8N9T8 703 aaKnown RBP5.33□□□□□ -1.56
HMGB3P3-201ENST00000510526 GPCPD1Q9NPB8 672 aa5.33□□□□□ -1.56
HMGB3P3-201ENST00000510526 H3BM21 787 aa5.32□□□□□ -1.56
HMGB3P3-201ENST00000510526 TRIM46Q7Z4K8 759 aa5.32□□□□□ -1.56
HMGB3P3-201ENST00000510526 MPNDQ8N594 471 aa5.32□□□□□ -1.56
HMGB3P3-201ENST00000510526 FAM217BQ9NTX9 383 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P3-201ENST00000510526 C6orf229H3BNL8 230 aa5.31□□□□□ -1.56
HMGB3P3-201ENST00000510526 FDX1P10109 184 aa5.31□□□□□ -1.56
HMGB3P3-201ENST00000510526 BMP1P13497 986 aa5.31□□□□□ -1.56
HMGB3P3-201ENST00000510526 SH3BP2P78314 561 aa5.31□□□□□ -1.56
HMGB3P3-201ENST00000510526 PLCB2Q00722 1185 aa5.31□□□□□ -1.56
HMGB3P3-201ENST00000510526 GUCA2AQ02747 115 aa5.31□□□□□ -1.56
HMGB3P3-201ENST00000510526 SCARF1Q14162 830 aa5.31□□□□□ -1.56
HMGB3P3-201ENST00000510526 PTPRNQ16849 979 aa5.31□□□□□ -1.56
HMGB3P3-201ENST00000510526 PTCRAQ6ISU1 281 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P3-201ENST00000510526 SYMPKQ92797 1274 aaKnown RBP5.31□□□□□ -1.56
HMGB3P3-201ENST00000510526 VARSP26640 1264 aaKnown RBP5.3□□□□□ -1.56
HMGB3P3-201ENST00000510526 ZFP42Q96MM3 310 aa5.3□□□□□ -1.56
HMGB3P3-201ENST00000510526 EVA1BQ9NVM1 165 aa5.3□□□□□ -1.56
HMGB3P3-201ENST00000510526 SPDYE5A6NIY4 337 aa5.29□□□□□ -1.56
HMGB3P3-201ENST00000510526 CCDC102AQ96A19 550 aa5.29□□□□□ -1.56
HMGB3P3-201ENST00000510526 UNC93B1Q9H1C4 597 aa5.29□□□□□ -1.56
HMGB3P3-201ENST00000510526 KCNH2Q12809 1159 aa5.28□□□□□ -1.56
HMGB3P3-201ENST00000510526 DESI1Q6ICB0 168 aa5.28□□□□□ -1.56
HMGB3P3-201ENST00000510526 MRPL14Q6P1L8 145 aaKnown RBP5.28□□□□□ -1.56
HMGB3P3-201ENST00000510526 ADH1CP00326 375 aa5.27□□□□□ -1.57
HMGB3P3-201ENST00000510526 LORP23490 312 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P3-201ENST00000510526 VEGFBP49765 207 aa5.27□□□□□ -1.57
HMGB3P3-201ENST00000510526 NNTQ13423 1086 aa5.27□□□□□ -1.57
HMGB3P3-201ENST00000510526 ZNF511Q8NB15 262 aa5.27□□□□□ -1.57
HMGB3P3-201ENST00000510526 BAP1Q92560 729 aa5.27□□□□□ -1.57
HMGB3P3-201ENST00000510526 PCDHGC3Q9UN70 934 aa5.27□□□□□ -1.57
HMGB3P3-201ENST00000510526 VSIG8P0DPA2 414 aa5.26□□□□□ -1.57
HMGB3P3-201ENST00000510526 FAM174AQ8TBP5 190 aa5.26□□□□□ -1.57
HMGB3P3-201ENST00000510526 ERBB4Q15303 1308 aa5.25□□□□□ -1.57
HMGB3P3-201ENST00000510526 SSTR3P32745 418 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P3-201ENST00000510526 WDR4P57081 412 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms