RNA–Protein interactions for RNA: ENST00000510281.1

TRIO-215, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-215ENST00000510281 FNBP4Q8N3X1 1017 aaPredicted RBP29.74■■■□□ 2.35
TRIO-215ENST00000510281 COL22A1Q8NFW1 1626 aaPredicted RBP29.72■■■□□ 2.35
TRIO-215ENST00000510281 USP21Q9UK80 565 aa29.72■■■□□ 2.35
TRIO-215ENST00000510281 ACIN1Q9UKV3 1341 aaKnown RBP29.71■■■□□ 2.35
TRIO-215ENST00000510281 SRCAPQ6ZRS2 3230 aa29.71■■■□□ 2.35
TRIO-215ENST00000510281 TRPC5Q9UL62 973 aaPredicted RBP29.71■■■□□ 2.35
TRIO-215ENST00000510281 SPATA31E1Q6ZUB1 1445 aa29.71■■■□□ 2.35
TRIO-215ENST00000510281 PPLO60437 1756 aa29.7■■■□□ 2.35
TRIO-215ENST00000510281 CDC42BPGQ6DT37 1551 aa29.69■■■□□ 2.34
TRIO-215ENST00000510281 ATAD2Q6PL18 1390 aa29.69■■■□□ 2.34
TRIO-215ENST00000510281 ATRNO75882 1429 aa29.69■■■□□ 2.34
TRIO-215ENST00000510281 MYOM2P54296 1465 aa29.68■■■□□ 2.34
TRIO-215ENST00000510281 NPHP3Q7Z494 1330 aa29.67■■■□□ 2.34
TRIO-215ENST00000510281 RGL3Q3MIN7 710 aa29.65■■■□□ 2.34
TRIO-215ENST00000510281 PXDNQ92626 1479 aa29.65■■■□□ 2.34
TRIO-215ENST00000510281 TECPR2O15040 1411 aa29.62■■■□□ 2.33
TRIO-215ENST00000510281 ESCO1Q5FWF5 840 aa29.62■■■□□ 2.33
TRIO-215ENST00000510281 IFT172Q9UG01 1749 aa29.6■■■□□ 2.33
TRIO-215ENST00000510281 ADGRF5Q8IZF2 1346 aa29.6■■■□□ 2.33
TRIO-215ENST00000510281 BCL9LQ86UU0 1499 aa29.6■■■□□ 2.33
TRIO-215ENST00000510281 EP400Q96L91 3159 aa29.58■■■□□ 2.33
TRIO-215ENST00000510281 LRPPRCP42704 1394 aaKnown RBP29.57■■■□□ 2.32
TRIO-215ENST00000510281 FOXO3O43524 673 aa29.56■■■□□ 2.32
TRIO-215ENST00000510281 HRCP23327 699 aa29.56■■■□□ 2.32
TRIO-215ENST00000510281 ANKRD30BQ9BXX2 1392 aa29.55■■■□□ 2.32
TRIO-215ENST00000510281 ABCC11Q96J66 1382 aa29.54■■■□□ 2.32
TRIO-215ENST00000510281 WAPLQ7Z5K2 1190 aa29.52■■■□□ 2.32
TRIO-215ENST00000510281 XPCQ01831 940 aaPredicted RBP29.51■■■□□ 2.31
TRIO-215ENST00000510281 MARF1Q9Y4F3 1742 aaKnown RBP29.51■■■□□ 2.31
TRIO-215ENST00000510281 GJD4Q96KN9 370 aaPredicted RBP29.5■■■□□ 2.31
TRIO-215ENST00000510281 PIK3C2GO75747 1445 aa29.5■■■□□ 2.31
TRIO-215ENST00000510281 KNDC1Q76NI1 1749 aa29.49■■■□□ 2.31
TRIO-215ENST00000510281 CCDC125Q86Z20 511 aa29.49■■■□□ 2.31
TRIO-215ENST00000510281 STK26Q9P289 416 aa29.49■■■□□ 2.31
TRIO-215ENST00000510281 PLEKHH1Q9ULM0 1364 aa29.48■■■□□ 2.31
TRIO-215ENST00000510281 TRIM26Q12899 539 aaPredicted RBP29.46■■■□□ 2.31
TRIO-215ENST00000510281 SPATA31A3Q5VYP0 1347 aa29.45■■■□□ 2.31
TRIO-215ENST00000510281 SLIT2O94813 1529 aa29.45■■■□□ 2.31
TRIO-215ENST00000510281 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.45■■■□□ 2.31
TRIO-215ENST00000510281 NUTM2FA1L443 756 aa29.45■■■□□ 2.31
TRIO-215ENST00000510281 TMEM132EQ6IEE7 984 aa29.44■■■□□ 2.3
TRIO-215ENST00000510281 ZRANB1Q9UGI0 708 aa29.44■■■□□ 2.3
TRIO-215ENST00000510281 FMN2Q9NZ56 1722 aa29.44■■■□□ 2.3
TRIO-215ENST00000510281 UNC5CLQ8IV45 518 aa29.43■■■□□ 2.3
TRIO-215ENST00000510281 SIRT1Q96EB6 747 aa29.43■■■□□ 2.3
TRIO-215ENST00000510281 YTHDC2Q9H6S0 1430 aaKnown RBP29.43■■■□□ 2.3
TRIO-215ENST00000510281 KIF1AQ12756 1690 aa29.43■■■□□ 2.3
TRIO-215ENST00000510281 NRXN1Q9ULB1 1477 aa29.42■■■□□ 2.3
TRIO-215ENST00000510281 RALGAPBQ86X10 1494 aa29.4■■■□□ 2.3
TRIO-215ENST00000510281 GLI3P10071 1580 aa29.39■■■□□ 2.29
TRIO-215ENST00000510281 KRT28Q7Z3Y7 464 aa29.37■■■□□ 2.29
TRIO-215ENST00000510281 USP32Q8NFA0 1604 aa29.37■■■□□ 2.29
TRIO-215ENST00000510281 C14orf93Q9H972 538 aaKnown RBP29.35■■■□□ 2.29
TRIO-215ENST00000510281 TNS3Q68CZ2 1445 aa29.35■■■□□ 2.29
TRIO-215ENST00000510281 CFAP70Q5T0N1 1121 aa29.34■■■□□ 2.29
TRIO-215ENST00000510281 BLMP54132 1417 aaPredicted RBP29.34■■■□□ 2.29
TRIO-215ENST00000510281 PCGF6Q9BYE7 350 aa29.32■■■□□ 2.28
TRIO-215ENST00000510281 PHF8Q9UPP1 1060 aa29.32■■■□□ 2.28
TRIO-215ENST00000510281 SBNO1A3KN83 1393 aa29.3■■■□□ 2.28
TRIO-215ENST00000510281 DHX57Q6P158 1386 aaKnown RBP29.3■■■□□ 2.28
TRIO-215ENST00000510281 PSME1Q06323 249 aa29.3■■■□□ 2.28
TRIO-215ENST00000510281 VPS72Q15906 364 aa29.29■■■□□ 2.28
TRIO-215ENST00000510281 DCAF11Q8TEB1 546 aa29.28■■■□□ 2.28
TRIO-215ENST00000510281 KDM2AQ9Y2K7 1162 aa29.28■■■□□ 2.28
TRIO-215ENST00000510281 ONECUT3O60422 494 aaPredicted RBP29.26■■■□□ 2.27
TRIO-215ENST00000510281 SEPT12Q8IYM1 358 aa29.25■■■□□ 2.27
TRIO-215ENST00000510281 ARHGEF10O15013 1369 aa29.25■■■□□ 2.27
TRIO-215ENST00000510281 CABLES1Q8TDN4 633 aa29.24■■■□□ 2.27
TRIO-215ENST00000510281 NWD2Q9ULI1 1742 aa29.23■■■□□ 2.27
TRIO-215ENST00000510281 ADGRB1O14514 1584 aa29.23■■■□□ 2.27
TRIO-215ENST00000510281 HAP1P54257 671 aaPredicted RBP29.23■■■□□ 2.27
TRIO-215ENST00000510281 PRAM1Q96QH2 718 aa29.23■■■□□ 2.27
TRIO-215ENST00000510281 ANKARQ7Z5J8 1434 aa29.22■■■□□ 2.27
TRIO-215ENST00000510281 DLC1Q96QB1 1528 aa29.22■■■□□ 2.27
TRIO-215ENST00000510281 RGPD8O14715 1765 aaPredicted RBP29.21■■■□□ 2.27
TRIO-215ENST00000510281 BRWD3Q6RI45 1802 aa29.21■■■□□ 2.27
TRIO-215ENST00000510281 PLCH1Q4KWH8 1693 aa29.2■■■□□ 2.26
TRIO-215ENST00000510281 ABCA3Q99758 1704 aa29.2■■■□□ 2.26
TRIO-215ENST00000510281 DEFB132Q7Z7B7 95 aa29.19■■■□□ 2.26
TRIO-215ENST00000510281 ADGRB2O60241 1585 aa29.18■■■□□ 2.26
TRIO-215ENST00000510281 FAM83GA6ND36 823 aa29.16■■■□□ 2.26
TRIO-215ENST00000510281 SF3B2Q13435 895 aaKnown RBP29.16■■■□□ 2.26
TRIO-215ENST00000510281 SAFB2Q14151 953 aaKnown RBP eCLIP29.16■■■□□ 2.26
TRIO-215ENST00000510281 KRT27Q7Z3Y8 459 aa29.15■■■□□ 2.26
TRIO-215ENST00000510281 LMOD2Q6P5Q4 547 aa29.14■■■□□ 2.26
TRIO-215ENST00000510281 PMFBP1Q8TBY8 1022 aa29.13■■■□□ 2.25
TRIO-215ENST00000510281 POGKQ9P215 609 aa29.13■■■□□ 2.25
TRIO-215ENST00000510281 CCDC9Q9Y3X0 531 aaKnown RBP29.13■■■□□ 2.25
TRIO-215ENST00000510281 STAC3Q96MF2 364 aa29.11■■■□□ 2.25
TRIO-215ENST00000510281 PLEKHG5O94827 1062 aa29.1■■■□□ 2.25
TRIO-215ENST00000510281 TRAK1Q9UPV9 953 aa29.1■■■□□ 2.25
TRIO-215ENST00000510281 TRPM3Q9HCF6 1732 aaPredicted RBP29.1■■■□□ 2.25
TRIO-215ENST00000510281 NRAPQ86VF7 1730 aa29.09■■■□□ 2.25
TRIO-215ENST00000510281 SIN3AQ96ST3 1273 aa29.09■■■□□ 2.25
TRIO-215ENST00000510281 EIF3AQ14152 1382 aaKnown RBP29.08■■■□□ 2.25
TRIO-215ENST00000510281 GPRASP1Q5JY77 1395 aa29.06■■■□□ 2.24
TRIO-215ENST00000510281 PRR36Q9H6K5 1346 aa29.06■■■□□ 2.24
TRIO-215ENST00000510281 ALS2Q96Q42 1657 aa29.05■■■□□ 2.24
TRIO-215ENST00000510281 BTG4Q9NY30 223 aa29.05■■■□□ 2.24
TRIO-215ENST00000510281 TULP4Q9NRJ4 1543 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms