RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 SAFB2Q14151 953 aaKnown RBP eCLIP19.71■□□□□ 0.75
SNF8-206ENST00000509989 NBPF1Q3BBV0 1214 aa19.71■□□□□ 0.75
SNF8-206ENST00000509989 TRAK1Q9UPV9 953 aa19.7■□□□□ 0.74
SNF8-206ENST00000509989 KIAA1210Q9ULL0 1709 aa19.7■□□□□ 0.74
SNF8-206ENST00000509989 NHSL1Q5SYE7 1610 aa19.69■□□□□ 0.74
SNF8-206ENST00000509989 C1orf167Q5SNV9 1468 aa19.69■□□□□ 0.74
SNF8-206ENST00000509989 FMN2Q9NZ56 1722 aa19.69■□□□□ 0.74
SNF8-206ENST00000509989 NUTM2FA1L443 756 aa19.69■□□□□ 0.74
SNF8-206ENST00000509989 CDC42BPGQ6DT37 1551 aa19.69■□□□□ 0.74
SNF8-206ENST00000509989 PRAM1Q96QH2 718 aa19.68■□□□□ 0.74
SNF8-206ENST00000509989 ORAI2Q96SN7 254 aa19.68■□□□□ 0.74
SNF8-206ENST00000509989 MED1Q15648 1581 aaPredicted RBP19.68■□□□□ 0.74
SNF8-206ENST00000509989 AHDC1Q5TGY3 1603 aaPredicted RBP19.68■□□□□ 0.74
SNF8-206ENST00000509989 DLC1Q96QB1 1528 aa19.67■□□□□ 0.74
SNF8-206ENST00000509989 TRPM1Q7Z4N2 1603 aa19.65■□□□□ 0.74
SNF8-206ENST00000509989 NBPF8Q3BBV2 869 aa19.64■□□□□ 0.73
SNF8-206ENST00000509989 SIRT1Q96EB6 747 aa19.64■□□□□ 0.73
SNF8-206ENST00000509989 STAC3Q96MF2 364 aa19.64■□□□□ 0.73
SNF8-206ENST00000509989 USP32Q8NFA0 1604 aa19.64■□□□□ 0.73
SNF8-206ENST00000509989 DISP3Q9P2K9 1392 aa19.62■□□□□ 0.73
SNF8-206ENST00000509989 HIRIP3Q9BW71 556 aaPredicted RBP19.62■□□□□ 0.73
SNF8-206ENST00000509989 MINK1Q8N4C8 1332 aaPredicted RBP19.6■□□□□ 0.73
SNF8-206ENST00000509989 POGKQ9P215 609 aa19.6■□□□□ 0.73
SNF8-206ENST00000509989 ADGRB2O60241 1585 aa19.59■□□□□ 0.73
SNF8-206ENST00000509989 SHPRHQ149N8 1683 aa19.57■□□□□ 0.72
SNF8-206ENST00000509989 ESCO1Q5FWF5 840 aa19.57■□□□□ 0.72
SNF8-206ENST00000509989 LRP6O75581 1613 aa19.56■□□□□ 0.72
SNF8-206ENST00000509989 XPCQ01831 940 aaPredicted RBP19.56■□□□□ 0.72
SNF8-206ENST00000509989 ILDR2Q71H61 639 aa19.56■□□□□ 0.72
SNF8-206ENST00000509989 PRR36Q9H6K5 1346 aa19.54■□□□□ 0.72
SNF8-206ENST00000509989 QRICH2Q9H0J4 1663 aa19.54■□□□□ 0.72
SNF8-206ENST00000509989 JCADQ9P266 1359 aa19.54■□□□□ 0.72
SNF8-206ENST00000509989 PXDNQ92626 1479 aa19.53■□□□□ 0.72
SNF8-206ENST00000509989 FOXO3O43524 673 aa19.52■□□□□ 0.72
SNF8-206ENST00000509989 TONSLQ96HA7 1378 aa19.52■□□□□ 0.72
SNF8-206ENST00000509989 RGS17Q9UGC6 210 aaPredicted RBP19.51■□□□□ 0.71
SNF8-206ENST00000509989 SOS2Q07890 1332 aaPredicted RBP19.51■□□□□ 0.71
SNF8-206ENST00000509989 KIF1AQ12756 1690 aa19.5■□□□□ 0.71
SNF8-206ENST00000509989 WASLO00401 505 aaPredicted RBP19.49■□□□□ 0.71
SNF8-206ENST00000509989 PNPLA6Q8IY17 1366 aa19.48■□□□□ 0.71
SNF8-206ENST00000509989 TULP4Q9NRJ4 1543 aa19.48■□□□□ 0.71
SNF8-206ENST00000509989 PMFBP1Q8TBY8 1022 aa19.48■□□□□ 0.71
SNF8-206ENST00000509989 ROCK2O75116 1388 aaKnown RBP19.47■□□□□ 0.71
SNF8-206ENST00000509989 NUTM2BA6NNL0 878 aaPredicted RBP19.46■□□□□ 0.71
SNF8-206ENST00000509989 NUTM2EB1AL46 878 aaPredicted RBP19.46■□□□□ 0.71
SNF8-206ENST00000509989 NUTM2AQ8IVF1 878 aaPredicted RBP19.46■□□□□ 0.71
SNF8-206ENST00000509989 PHF8Q9UPP1 1060 aa19.46■□□□□ 0.71
SNF8-206ENST00000509989 ATP7BP35670 1465 aa19.46■□□□□ 0.71
SNF8-206ENST00000509989 TOPAZ1Q8N9V7 1692 aa19.46■□□□□ 0.71
SNF8-206ENST00000509989 LRRC59Q96AG4 307 aaKnown RBP19.45■□□□□ 0.7
SNF8-206ENST00000509989 CDK19Q9BWU1 502 aa19.45■□□□□ 0.7
SNF8-206ENST00000509989 RALGAPBQ86X10 1494 aa19.45■□□□□ 0.7
SNF8-206ENST00000509989 GPRASP1Q5JY77 1395 aa19.44■□□□□ 0.7
SNF8-206ENST00000509989 ANKARQ7Z5J8 1434 aa19.44■□□□□ 0.7
SNF8-206ENST00000509989 CENPJQ9HC77 1338 aaPredicted RBP19.44■□□□□ 0.7
SNF8-206ENST00000509989 TRPM3Q9HCF6 1732 aaPredicted RBP19.43■□□□□ 0.7
SNF8-206ENST00000509989 NPHP3Q7Z494 1330 aa19.43■□□□□ 0.7
SNF8-206ENST00000509989 COL22A1Q8NFW1 1626 aaPredicted RBP19.43■□□□□ 0.7
SNF8-206ENST00000509989 ITSN1Q15811 1721 aa19.42■□□□□ 0.7
SNF8-206ENST00000509989 KRT28Q7Z3Y7 464 aa19.42■□□□□ 0.7
SNF8-206ENST00000509989 NUDT16Q96DE0 195 aaKnown RBP19.41■□□□□ 0.7
SNF8-206ENST00000509989 PHF23Q9BUL5 403 aaPredicted RBP19.41■□□□□ 0.7
SNF8-206ENST00000509989 SPATA31A6Q5VVP1 1343 aa19.41■□□□□ 0.7
SNF8-206ENST00000509989 CABP2Q9NPB3 220 aa19.4■□□□□ 0.7
SNF8-206ENST00000509989 POTEAQ6S8J7 498 aa19.39■□□□□ 0.69
SNF8-206ENST00000509989 PLEKHG5O94827 1062 aa19.38■□□□□ 0.69
SNF8-206ENST00000509989 CCER1Q8TC90 406 aaPredicted RBP19.38■□□□□ 0.69
SNF8-206ENST00000509989 CARD11Q9BXL7 1154 aa19.38■□□□□ 0.69
SNF8-206ENST00000509989 ABCA3Q99758 1704 aa19.37■□□□□ 0.69
SNF8-206ENST00000509989 MARF1Q9Y4F3 1742 aaKnown RBP19.37■□□□□ 0.69
SNF8-206ENST00000509989 ALS2Q96Q42 1657 aa19.37■□□□□ 0.69
SNF8-206ENST00000509989 SPATA31A3Q5VYP0 1347 aa19.37■□□□□ 0.69
SNF8-206ENST00000509989 ADAMTS2O95450 1211 aa19.35■□□□□ 0.69
SNF8-206ENST00000509989 SRPK2P78362 688 aaKnown RBP19.34■□□□□ 0.69
SNF8-206ENST00000509989 PSME1Q06323 249 aa19.34■□□□□ 0.69
SNF8-206ENST00000509989 MEX3CQ5U5Q3 659 aaKnown RBP19.34■□□□□ 0.69
SNF8-206ENST00000509989 CABLES1Q8TDN4 633 aa19.34■□□□□ 0.69
SNF8-206ENST00000509989 TNS3Q68CZ2 1445 aa19.34■□□□□ 0.69
SNF8-206ENST00000509989 EIF3AQ14152 1382 aaKnown RBP19.33■□□□□ 0.69
SNF8-206ENST00000509989 CRYBG1Q9Y4K1 1723 aa19.33■□□□□ 0.68
SNF8-206ENST00000509989 CLSPNQ9HAW4 1339 aa19.32■□□□□ 0.68
SNF8-206ENST00000509989 ACEP12821 1306 aa19.31■□□□□ 0.68
SNF8-206ENST00000509989 NGDNQ8NEJ9 315 aaKnown RBP19.31■□□□□ 0.68
SNF8-206ENST00000509989 C8orf37Q96NL8 207 aa19.31■□□□□ 0.68
SNF8-206ENST00000509989 PPIP5K1Q6PFW1 1433 aa19.31■□□□□ 0.68
SNF8-206ENST00000509989 LMOD2Q6P5Q4 547 aa19.3■□□□□ 0.68
SNF8-206ENST00000509989 CCDC61Q9Y6R9 512 aa19.3■□□□□ 0.68
SNF8-206ENST00000509989 SBNO1A3KN83 1393 aa19.3■□□□□ 0.68
SNF8-206ENST00000509989 AFF2P51816 1311 aa19.29■□□□□ 0.68
SNF8-206ENST00000509989 POLR3AO14802 1390 aaPredicted RBP19.29■□□□□ 0.68
SNF8-206ENST00000509989 PLEKHG3A1L390 1219 aa19.28■□□□□ 0.68
SNF8-206ENST00000509989 CABP1Q9NZU7 370 aa19.28■□□□□ 0.68
SNF8-206ENST00000509989 AKAP12Q02952 1782 aa19.28■□□□□ 0.68
SNF8-206ENST00000509989 ST20-MTHFSA0A0A6YYL1 179 aa19.27■□□□□ 0.68
SNF8-206ENST00000509989 EVC2Q86UK5 1308 aa19.26■□□□□ 0.67
SNF8-206ENST00000509989 NUTM2GQ5VZR2 741 aa19.26■□□□□ 0.67
SNF8-206ENST00000509989 TESK2Q96S53 571 aa19.26■□□□□ 0.67
SNF8-206ENST00000509989 PAK3O75914 559 aaPredicted RBP19.25■□□□□ 0.67
SNF8-206ENST00000509989 SBNO2Q9Y2G9 1366 aa19.24■□□□□ 0.67
SNF8-206ENST00000509989 PHRF1Q9P1Y6 1649 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 283 ms