RNA–Protein interactions for RNA: ENST00000509692.5

SKP2-205, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-205ENST00000509692 SIRT1Q96EB6 747 aa23.52■■□□□ 1.36
SKP2-205ENST00000509692 DISP3Q9P2K9 1392 aa23.51■■□□□ 1.35
SKP2-205ENST00000509692 TIMELESSQ9UNS1 1208 aa23.51■■□□□ 1.35
SKP2-205ENST00000509692 C1orf167Q5SNV9 1468 aa23.5■■□□□ 1.35
SKP2-205ENST00000509692 COL16A1Q07092 1604 aaPredicted RBP23.49■■□□□ 1.35
SKP2-205ENST00000509692 AHDC1Q5TGY3 1603 aaPredicted RBP23.49■■□□□ 1.35
SKP2-205ENST00000509692 CDC42BPGQ6DT37 1551 aa23.49■■□□□ 1.35
SKP2-205ENST00000509692 MED1Q15648 1581 aaPredicted RBP23.48■■□□□ 1.35
SKP2-205ENST00000509692 PRAM1Q96QH2 718 aa23.48■■□□□ 1.35
SKP2-205ENST00000509692 DLC1Q96QB1 1528 aa23.47■■□□□ 1.35
SKP2-205ENST00000509692 TRAK1Q9UPV9 953 aa23.47■■□□□ 1.35
SKP2-205ENST00000509692 SAFB2Q14151 953 aaKnown RBP eCLIP23.45■■□□□ 1.34
SKP2-205ENST00000509692 ORAI2Q96SN7 254 aa23.45■■□□□ 1.34
SKP2-205ENST00000509692 NHSL1Q5SYE7 1610 aa23.45■■□□□ 1.34
SKP2-205ENST00000509692 DDX17Q92841 729 aaKnown RBP23.44■■□□□ 1.34
SKP2-205ENST00000509692 KIAA1210Q9ULL0 1709 aa23.44■■□□□ 1.34
SKP2-205ENST00000509692 POGKQ9P215 609 aa23.42■■□□□ 1.34
SKP2-205ENST00000509692 NUTM2FA1L443 756 aa23.41■■□□□ 1.34
SKP2-205ENST00000509692 NBPF1Q3BBV0 1214 aa23.41■■□□□ 1.34
SKP2-205ENST00000509692 FMN2Q9NZ56 1722 aa23.41■■□□□ 1.34
SKP2-205ENST00000509692 JCADQ9P266 1359 aa23.41■■□□□ 1.34
SKP2-205ENST00000509692 NBPF8Q3BBV2 869 aa23.41■■□□□ 1.34
SKP2-205ENST00000509692 TRPM1Q7Z4N2 1603 aa23.39■■□□□ 1.34
SKP2-205ENST00000509692 ARHGEF28Q8N1W1 1705 aaKnown RBP23.38■■□□□ 1.33
SKP2-205ENST00000509692 ESCO1Q5FWF5 840 aa23.37■■□□□ 1.33
SKP2-205ENST00000509692 RGPD8O14715 1765 aaPredicted RBP23.36■■□□□ 1.33
SKP2-205ENST00000509692 HIRIP3Q9BW71 556 aaPredicted RBP23.35■■□□□ 1.33
SKP2-205ENST00000509692 SHPRHQ149N8 1683 aa23.35■■□□□ 1.33
SKP2-205ENST00000509692 ADGRB2O60241 1585 aa23.34■■□□□ 1.33
SKP2-205ENST00000509692 MINK1Q8N4C8 1332 aaPredicted RBP23.34■■□□□ 1.33
SKP2-205ENST00000509692 ILDR2Q71H61 639 aa23.33■■□□□ 1.33
SKP2-205ENST00000509692 SOS2Q07890 1332 aaPredicted RBP23.32■■□□□ 1.32
SKP2-205ENST00000509692 LRRC59Q96AG4 307 aaKnown RBP23.32■■□□□ 1.32
SKP2-205ENST00000509692 RALGAPBQ86X10 1494 aa23.31■■□□□ 1.32
SKP2-205ENST00000509692 ROCK2O75116 1388 aaKnown RBP23.3■■□□□ 1.32
SKP2-205ENST00000509692 FOXO3O43524 673 aa23.3■■□□□ 1.32
SKP2-205ENST00000509692 PHF23Q9BUL5 403 aaPredicted RBP23.3■■□□□ 1.32
SKP2-205ENST00000509692 USP32Q8NFA0 1604 aa23.3■■□□□ 1.32
SKP2-205ENST00000509692 SPATA31A6Q5VVP1 1343 aa23.29■■□□□ 1.32
SKP2-205ENST00000509692 LRP6O75581 1613 aa23.28■■□□□ 1.32
SKP2-205ENST00000509692 NPHP3Q7Z494 1330 aa23.28■■□□□ 1.32
SKP2-205ENST00000509692 WASLO00401 505 aaPredicted RBP23.27■■□□□ 1.32
SKP2-205ENST00000509692 RGS17Q9UGC6 210 aaPredicted RBP23.27■■□□□ 1.32
SKP2-205ENST00000509692 XPCQ01831 940 aaPredicted RBP23.26■■□□□ 1.31
SKP2-205ENST00000509692 PXDNQ92626 1479 aa23.26■■□□□ 1.31
SKP2-205ENST00000509692 PNPLA6Q8IY17 1366 aa23.26■■□□□ 1.31
SKP2-205ENST00000509692 KIF1AQ12756 1690 aa23.26■■□□□ 1.31
SKP2-205ENST00000509692 GPRASP1Q5JY77 1395 aa23.25■■□□□ 1.31
SKP2-205ENST00000509692 ANKARQ7Z5J8 1434 aa23.25■■□□□ 1.31
SKP2-205ENST00000509692 PHF8Q9UPP1 1060 aa23.25■■□□□ 1.31
SKP2-205ENST00000509692 PRR36Q9H6K5 1346 aa23.25■■□□□ 1.31
SKP2-205ENST00000509692 TULP4Q9NRJ4 1543 aa23.23■■□□□ 1.31
SKP2-205ENST00000509692 NUTM2BA6NNL0 878 aaPredicted RBP23.22■■□□□ 1.31
SKP2-205ENST00000509692 NUTM2EB1AL46 878 aaPredicted RBP23.22■■□□□ 1.31
SKP2-205ENST00000509692 NUTM2AQ8IVF1 878 aaPredicted RBP23.22■■□□□ 1.31
SKP2-205ENST00000509692 CARD11Q9BXL7 1154 aa23.22■■□□□ 1.31
SKP2-205ENST00000509692 PMFBP1Q8TBY8 1022 aa23.21■■□□□ 1.31
SKP2-205ENST00000509692 EIF3AQ14152 1382 aaKnown RBP23.2■■□□□ 1.3
SKP2-205ENST00000509692 CENPJQ9HC77 1338 aaPredicted RBP23.2■■□□□ 1.3
SKP2-205ENST00000509692 KRT28Q7Z3Y7 464 aa23.19■■□□□ 1.3
SKP2-205ENST00000509692 CDK19Q9BWU1 502 aa23.19■■□□□ 1.3
SKP2-205ENST00000509692 QRICH2Q9H0J4 1663 aa23.18■■□□□ 1.3
SKP2-205ENST00000509692 ZEB1P37275 1124 aaPredicted RBP23.17■■□□□ 1.3
SKP2-205ENST00000509692 MEX3CQ5U5Q3 659 aaKnown RBP23.17■■□□□ 1.3
SKP2-205ENST00000509692 ATP7BP35670 1465 aa23.17■■□□□ 1.3
SKP2-205ENST00000509692 NUDT16Q96DE0 195 aaKnown RBP23.16■■□□□ 1.3
SKP2-205ENST00000509692 COL22A1Q8NFW1 1626 aaPredicted RBP23.16■■□□□ 1.3
SKP2-205ENST00000509692 SPATA31A3Q5VYP0 1347 aa23.15■■□□□ 1.3
SKP2-205ENST00000509692 PSME1Q06323 249 aa23.14■■□□□ 1.29
SKP2-205ENST00000509692 POTEAQ6S8J7 498 aa23.14■■□□□ 1.29
SKP2-205ENST00000509692 ITSN1Q15811 1721 aa23.13■■□□□ 1.29
SKP2-205ENST00000509692 ADAMTS2O95450 1211 aa23.11■■□□□ 1.29
SKP2-205ENST00000509692 TOPAZ1Q8N9V7 1692 aa23.1■■□□□ 1.29
SKP2-205ENST00000509692 CABP2Q9NPB3 220 aa23.1■■□□□ 1.29
SKP2-205ENST00000509692 SBNO1A3KN83 1393 aa23.09■■□□□ 1.29
SKP2-205ENST00000509692 USP47Q96K76 1375 aa23.09■■□□□ 1.29
SKP2-205ENST00000509692 CCDC61Q9Y6R9 512 aa23.09■■□□□ 1.29
SKP2-205ENST00000509692 TNS3Q68CZ2 1445 aa23.09■■□□□ 1.29
SKP2-205ENST00000509692 TRPM3Q9HCF6 1732 aaPredicted RBP23.09■■□□□ 1.29
SKP2-205ENST00000509692 SRPK2P78362 688 aaKnown RBP23.08■■□□□ 1.29
SKP2-205ENST00000509692 NGDNQ8NEJ9 315 aaKnown RBP23.08■■□□□ 1.29
SKP2-205ENST00000509692 C8orf37Q96NL8 207 aa23.08■■□□□ 1.28
SKP2-205ENST00000509692 AFF2P51816 1311 aa23.06■■□□□ 1.28
SKP2-205ENST00000509692 PLEKHG3A1L390 1219 aa23.04■■□□□ 1.28
SKP2-205ENST00000509692 ZNF772Q68DY9 489 aaPredicted RBP23.04■■□□□ 1.28
SKP2-205ENST00000509692 LMOD2Q6P5Q4 547 aa23.04■■□□□ 1.28
SKP2-205ENST00000509692 ST20-MTHFSA0A0A6YYL1 179 aa23.04■■□□□ 1.28
SKP2-205ENST00000509692 ACEP12821 1306 aa23.04■■□□□ 1.28
SKP2-205ENST00000509692 EVC2Q86UK5 1308 aa23.04■■□□□ 1.28
SKP2-205ENST00000509692 ALS2Q96Q42 1657 aa23.03■■□□□ 1.28
SKP2-205ENST00000509692 SOCS7O14512 581 aa23.03■■□□□ 1.28
SKP2-205ENST00000509692 POLR3AO14802 1390 aaPredicted RBP23.03■■□□□ 1.28
SKP2-205ENST00000509692 MARF1Q9Y4F3 1742 aaKnown RBP23.02■■□□□ 1.28
SKP2-205ENST00000509692 EIF4G2P78344 907 aaKnown RBP eCLIP23.02■■□□□ 1.28
SKP2-205ENST00000509692 CABLES1Q8TDN4 633 aa23.02■■□□□ 1.28
SKP2-205ENST00000509692 NGLY1Q96IV0 654 aa23.02■■□□□ 1.28
SKP2-205ENST00000509692 ARHGEF10O15013 1369 aa23.02■■□□□ 1.28
SKP2-205ENST00000509692 PPIP5K1Q6PFW1 1433 aa23.02■■□□□ 1.28
SKP2-205ENST00000509692 PLEKHG5O94827 1062 aa23.01■■□□□ 1.27
SKP2-205ENST00000509692 SBNO2Q9Y2G9 1366 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms