RNA–Protein interactions for RNA: ENST00000509632.5

SDHA-212, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 4

Gene SDHA, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-212ENST00000509632 ESCO1Q5FWF5 840 aa31.91■■■□□ 2.7
SDHA-212ENST00000509632 CFAP70Q5T0N1 1121 aa31.9■■■□□ 2.7
SDHA-212ENST00000509632 PNPLA6Q8IY17 1366 aa31.89■■■□□ 2.7
SDHA-212ENST00000509632 IFT172Q9UG01 1749 aa31.89■■■□□ 2.69
SDHA-212ENST00000509632 NUTM2FA1L443 756 aa31.88■■■□□ 2.69
SDHA-212ENST00000509632 SOS2Q07890 1332 aaPredicted RBP31.88■■■□□ 2.69
SDHA-212ENST00000509632 TECPR2O15040 1411 aa31.88■■■□□ 2.69
SDHA-212ENST00000509632 PLEKHH1Q9ULM0 1364 aa31.87■■■□□ 2.69
SDHA-212ENST00000509632 HRCP23327 699 aa31.87■■■□□ 2.69
SDHA-212ENST00000509632 YTHDC2Q9H6S0 1430 aaKnown RBP31.86■■■□□ 2.69
SDHA-212ENST00000509632 AFF2P51816 1311 aa31.84■■■□□ 2.69
SDHA-212ENST00000509632 SIRT1Q96EB6 747 aa31.84■■■□□ 2.69
SDHA-212ENST00000509632 C8orf37Q96NL8 207 aa31.84■■■□□ 2.69
SDHA-212ENST00000509632 DHX57Q6P158 1386 aaKnown RBP31.82■■■□□ 2.69
SDHA-212ENST00000509632 FOXO3O43524 673 aa31.81■■■□□ 2.68
SDHA-212ENST00000509632 ADAMTS2O95450 1211 aa31.81■■■□□ 2.68
SDHA-212ENST00000509632 RXRBP28702 533 aa31.81■■■□□ 2.68
SDHA-212ENST00000509632 KDM2AQ9Y2K7 1162 aa31.81■■■□□ 2.68
SDHA-212ENST00000509632 NPHP3Q7Z494 1330 aa31.79■■■□□ 2.68
SDHA-212ENST00000509632 NRXN1Q9ULB1 1477 aa31.79■■■□□ 2.68
SDHA-212ENST00000509632 CDC42BPGQ6DT37 1551 aa31.78■■■□□ 2.68
SDHA-212ENST00000509632 DCAF11Q8TEB1 546 aa31.78■■■□□ 2.68
SDHA-212ENST00000509632 MYOM2P54296 1465 aa31.78■■■□□ 2.68
SDHA-212ENST00000509632 XPCQ01831 940 aaPredicted RBP31.77■■■□□ 2.68
SDHA-212ENST00000509632 NGLY1Q96IV0 654 aa31.77■■■□□ 2.68
SDHA-212ENST00000509632 LAMC1P11047 1609 aa31.75■■■□□ 2.67
SDHA-212ENST00000509632 SAFB2Q14151 953 aaKnown RBP eCLIP31.75■■■□□ 2.67
SDHA-212ENST00000509632 PRAM1Q96QH2 718 aa31.74■■■□□ 2.67
SDHA-212ENST00000509632 QTRT2Q9H974 415 aaKnown RBP31.74■■■□□ 2.67
SDHA-212ENST00000509632 POGKQ9P215 609 aa31.72■■■□□ 2.67
SDHA-212ENST00000509632 KNDC1Q76NI1 1749 aa31.72■■■□□ 2.67
SDHA-212ENST00000509632 TRAK1Q9UPV9 953 aa31.68■■■□□ 2.66
SDHA-212ENST00000509632 STAC3Q96MF2 364 aa31.67■■■□□ 2.66
SDHA-212ENST00000509632 PXDNQ92626 1479 aa31.65■■■□□ 2.66
SDHA-212ENST00000509632 RBM6P78332 1123 aaKnown RBP31.64■■■□□ 2.66
SDHA-212ENST00000509632 KRT28Q7Z3Y7 464 aa31.64■■■□□ 2.66
SDHA-212ENST00000509632 USP21Q9UK80 565 aa31.63■■■□□ 2.65
SDHA-212ENST00000509632 PHF8Q9UPP1 1060 aa31.63■■■□□ 2.65
SDHA-212ENST00000509632 FNBP4Q8N3X1 1017 aaPredicted RBP31.6■■■□□ 2.65
SDHA-212ENST00000509632 FMN2Q9NZ56 1722 aa31.6■■■□□ 2.65
SDHA-212ENST00000509632 SPATA31A3Q5VYP0 1347 aa31.58■■■□□ 2.65
SDHA-212ENST00000509632 UPF1Q92900 1129 aaKnown RBP eCLIP31.58■■■□□ 2.65
SDHA-212ENST00000509632 HIRIP3Q9BW71 556 aaPredicted RBP31.58■■■□□ 2.65
SDHA-212ENST00000509632 PSME1Q06323 249 aa31.57■■■□□ 2.64
SDHA-212ENST00000509632 DLC1Q96QB1 1528 aa31.57■■■□□ 2.64
SDHA-212ENST00000509632 CDK12Q9NYV4 1490 aaPredicted RBP31.57■■■□□ 2.64
SDHA-212ENST00000509632 ADGRB1O14514 1584 aa31.56■■■□□ 2.64
SDHA-212ENST00000509632 TRPC5Q9UL62 973 aaPredicted RBP31.56■■■□□ 2.64
SDHA-212ENST00000509632 MINK1Q8N4C8 1332 aaPredicted RBP31.55■■■□□ 2.64
SDHA-212ENST00000509632 COL22A1Q8NFW1 1626 aaPredicted RBP31.55■■■□□ 2.64
SDHA-212ENST00000509632 PMFBP1Q8TBY8 1022 aa31.54■■■□□ 2.64
SDHA-212ENST00000509632 RGPD8O14715 1765 aaPredicted RBP31.49■■■□□ 2.63
SDHA-212ENST00000509632 KIF1AQ12756 1690 aa31.49■■■□□ 2.63
SDHA-212ENST00000509632 LMOD2Q6P5Q4 547 aa31.49■■■□□ 2.63
SDHA-212ENST00000509632 PLEKHG5O94827 1062 aa31.48■■■□□ 2.63
SDHA-212ENST00000509632 RGS12O14924 1447 aa31.48■■■□□ 2.63
SDHA-212ENST00000509632 WASLO00401 505 aaPredicted RBP31.47■■■□□ 2.63
SDHA-212ENST00000509632 HAP1P54257 671 aaPredicted RBP31.46■■■□□ 2.63
SDHA-212ENST00000509632 CABLES1Q8TDN4 633 aa31.46■■■□□ 2.63
SDHA-212ENST00000509632 ANKARQ7Z5J8 1434 aa31.46■■■□□ 2.63
SDHA-212ENST00000509632 SBNO1A3KN83 1393 aa31.43■■■□□ 2.62
SDHA-212ENST00000509632 BCL9LQ86UU0 1499 aa31.43■■■□□ 2.62
SDHA-212ENST00000509632 ATRNO75882 1429 aa31.42■■■□□ 2.62
SDHA-212ENST00000509632 TNS3Q68CZ2 1445 aa31.42■■■□□ 2.62
SDHA-212ENST00000509632 PRR36Q9H6K5 1346 aa31.42■■■□□ 2.62
SDHA-212ENST00000509632 EIF3AQ14152 1382 aaKnown RBP31.4■■■□□ 2.62
SDHA-212ENST00000509632 UNC5CLQ8IV45 518 aa31.39■■■□□ 2.62
SDHA-212ENST00000509632 GJD4Q96KN9 370 aaPredicted RBP31.39■■■□□ 2.62
SDHA-212ENST00000509632 ADGRB2O60241 1585 aa31.39■■■□□ 2.61
SDHA-212ENST00000509632 NBPF1Q3BBV0 1214 aa31.38■■■□□ 2.61
SDHA-212ENST00000509632 NGDNQ8NEJ9 315 aaKnown RBP31.37■■■□□ 2.61
SDHA-212ENST00000509632 ARHGEF10O15013 1369 aa31.37■■■□□ 2.61
SDHA-212ENST00000509632 USP32Q8NFA0 1604 aa31.37■■■□□ 2.61
SDHA-212ENST00000509632 GPRASP1Q5JY77 1395 aa31.36■■■□□ 2.61
SDHA-212ENST00000509632 NUDT16Q96DE0 195 aaKnown RBP31.34■■■□□ 2.61
SDHA-212ENST00000509632 CDK19Q9BWU1 502 aa31.34■■■□□ 2.61
SDHA-212ENST00000509632 MARF1Q9Y4F3 1742 aaKnown RBP31.32■■■□□ 2.61
SDHA-212ENST00000509632 TULP4Q9NRJ4 1543 aa31.32■■■□□ 2.6
SDHA-212ENST00000509632 SLIT2O94813 1529 aa31.31■■■□□ 2.6
SDHA-212ENST00000509632 PAK3O75914 559 aaPredicted RBP31.3■■■□□ 2.6
SDHA-212ENST00000509632 FAM83GA6ND36 823 aa31.29■■■□□ 2.6
SDHA-212ENST00000509632 SIN3AQ96ST3 1273 aa31.29■■■□□ 2.6
SDHA-212ENST00000509632 L3MBTL2Q969R5 705 aa31.28■■■□□ 2.6
SDHA-212ENST00000509632 ATAD2Q6PL18 1390 aa31.28■■■□□ 2.6
SDHA-212ENST00000509632 ARHGEF28Q8N1W1 1705 aaKnown RBP31.26■■■□□ 2.59
SDHA-212ENST00000509632 NEUROD1Q13562 356 aa31.25■■■□□ 2.59
SDHA-212ENST00000509632 VPS72Q15906 364 aa31.23■■■□□ 2.59
SDHA-212ENST00000509632 CCDC9Q9Y3X0 531 aaKnown RBP31.23■■■□□ 2.59
SDHA-212ENST00000509632 RALGAPBQ86X10 1494 aa31.22■■■□□ 2.59
SDHA-212ENST00000509632 CCDC61Q9Y6R9 512 aa31.22■■■□□ 2.59
SDHA-212ENST00000509632 KIAA1210Q9ULL0 1709 aa31.21■■■□□ 2.59
SDHA-212ENST00000509632 ATP7BP35670 1465 aa31.2■■■□□ 2.58
SDHA-212ENST00000509632 TRPM3Q9HCF6 1732 aaPredicted RBP31.18■■■□□ 2.58
SDHA-212ENST00000509632 NBPF8Q3BBV2 869 aa31.18■■■□□ 2.58
SDHA-212ENST00000509632 CENPJQ9HC77 1338 aaPredicted RBP31.18■■■□□ 2.58
SDHA-212ENST00000509632 BTG4Q9NY30 223 aa31.17■■■□□ 2.58
SDHA-212ENST00000509632 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.17■■■□□ 2.58
SDHA-212ENST00000509632 ACEP12821 1306 aa31.17■■■□□ 2.58
SDHA-212ENST00000509632 PLEKHG3A1L390 1219 aa31.16■■■□□ 2.58
SDHA-212ENST00000509632 SRPK2P78362 688 aaKnown RBP31.16■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms