RNA–Protein interactions for RNA: ENST00000509589.5

CYSTM1-203, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 3

Gene CYSTM1, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-203ENST00000509589 HFM1A2PYH4 1435 aa15.59■□□□□ 0.09
CYSTM1-203ENST00000509589 ATRNO75882 1429 aa15.59■□□□□ 0.09
CYSTM1-203ENST00000509589 MYOM2P54296 1465 aa15.59■□□□□ 0.09
CYSTM1-203ENST00000509589 XPCQ01831 940 aaPredicted RBP15.58■□□□□ 0.08
CYSTM1-203ENST00000509589 TRPC5Q9UL62 973 aaPredicted RBP15.58■□□□□ 0.08
CYSTM1-203ENST00000509589 PXDNQ92626 1479 aa15.58■□□□□ 0.08
CYSTM1-203ENST00000509589 CDC42BPGQ6DT37 1551 aa15.58■□□□□ 0.08
CYSTM1-203ENST00000509589 FOXD1Q16676 465 aa15.56■□□□□ 0.08
CYSTM1-203ENST00000509589 ESCO1Q5FWF5 840 aa15.56■□□□□ 0.08
CYSTM1-203ENST00000509589 RPGRIP1LQ68CZ1 1315 aa15.56■□□□□ 0.08
CYSTM1-203ENST00000509589 BCL9LQ86UU0 1499 aa15.55■□□□□ 0.08
CYSTM1-203ENST00000509589 SLC4A1APQ9BWU0 796 aaKnown RBP15.55■□□□□ 0.08
CYSTM1-203ENST00000509589 MARF1Q9Y4F3 1742 aaKnown RBP15.54■□□□□ 0.08
CYSTM1-203ENST00000509589 NPHP3Q7Z494 1330 aa15.54■□□□□ 0.08
CYSTM1-203ENST00000509589 ADGRF5Q8IZF2 1346 aa15.54■□□□□ 0.08
CYSTM1-203ENST00000509589 NUTM2FA1L443 756 aa15.54■□□□□ 0.08
CYSTM1-203ENST00000509589 FOXO3O43524 673 aa15.54■□□□□ 0.08
CYSTM1-203ENST00000509589 WAPLQ7Z5K2 1190 aa15.53■□□□□ 0.08
CYSTM1-203ENST00000509589 STK26Q9P289 416 aa15.52■□□□□ 0.08
CYSTM1-203ENST00000509589 RGPD8O14715 1765 aaPredicted RBP15.52■□□□□ 0.07
CYSTM1-203ENST00000509589 PLEKHH1Q9ULM0 1364 aa15.51■□□□□ 0.07
CYSTM1-203ENST00000509589 IFT172Q9UG01 1749 aa15.51■□□□□ 0.07
CYSTM1-203ENST00000509589 TECPR2O15040 1411 aa15.5■□□□□ 0.07
CYSTM1-203ENST00000509589 RGL3Q3MIN7 710 aa15.49■□□□□ 0.07
CYSTM1-203ENST00000509589 TMEM132EQ6IEE7 984 aa15.49■□□□□ 0.07
CYSTM1-203ENST00000509589 LRPPRCP42704 1394 aaKnown RBP15.49■□□□□ 0.07
CYSTM1-203ENST00000509589 GJD4Q96KN9 370 aaPredicted RBP15.48■□□□□ 0.07
CYSTM1-203ENST00000509589 SPATA31E1Q6ZUB1 1445 aa15.48■□□□□ 0.07
CYSTM1-203ENST00000509589 GLI3P10071 1580 aa15.48■□□□□ 0.07
CYSTM1-203ENST00000509589 CCDC144AA2RUR9 1427 aa15.47■□□□□ 0.07
CYSTM1-203ENST00000509589 ZRANB1Q9UGI0 708 aa15.47■□□□□ 0.07
CYSTM1-203ENST00000509589 RALGAPBQ86X10 1494 aa15.46■□□□□ 0.07
CYSTM1-203ENST00000509589 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.46■□□□□ 0.07
CYSTM1-203ENST00000509589 FMN2Q9NZ56 1722 aa15.46■□□□□ 0.07
CYSTM1-203ENST00000509589 PLEKHG5O94827 1062 aa15.46■□□□□ 0.07
CYSTM1-203ENST00000509589 SLIT2O94813 1529 aa15.46■□□□□ 0.07
CYSTM1-203ENST00000509589 ABCC11Q96J66 1382 aa15.46■□□□□ 0.07
CYSTM1-203ENST00000509589 KNDC1Q76NI1 1749 aa15.46■□□□□ 0.06
CYSTM1-203ENST00000509589 SPATA31A3Q5VYP0 1347 aa15.45■□□□□ 0.06
CYSTM1-203ENST00000509589 PIK3C2GO75747 1445 aa15.44■□□□□ 0.06
CYSTM1-203ENST00000509589 USP32Q8NFA0 1604 aa15.44■□□□□ 0.06
CYSTM1-203ENST00000509589 UNC5CLQ8IV45 518 aa15.44■□□□□ 0.06
CYSTM1-203ENST00000509589 ANKRD30BQ9BXX2 1392 aa15.44■□□□□ 0.06
CYSTM1-203ENST00000509589 YTHDC2Q9H6S0 1430 aaKnown RBP15.43■□□□□ 0.06
CYSTM1-203ENST00000509589 BRWD3Q6RI45 1802 aa15.43■□□□□ 0.06
CYSTM1-203ENST00000509589 KIF1AQ12756 1690 aa15.43■□□□□ 0.06
CYSTM1-203ENST00000509589 KRT28Q7Z3Y7 464 aa15.42■□□□□ 0.06
CYSTM1-203ENST00000509589 CCDC125Q86Z20 511 aa15.42■□□□□ 0.06
CYSTM1-203ENST00000509589 CABLES1Q8TDN4 633 aa15.42■□□□□ 0.06
CYSTM1-203ENST00000509589 BLMP54132 1417 aaPredicted RBP15.41■□□□□ 0.06
CYSTM1-203ENST00000509589 DEFB132Q7Z7B7 95 aa15.4■□□□□ 0.06
CYSTM1-203ENST00000509589 MPHOSPH9Q99550 1183 aa15.4■□□□□ 0.06
CYSTM1-203ENST00000509589 TNS3Q68CZ2 1445 aa15.4■□□□□ 0.06
CYSTM1-203ENST00000509589 PLCH1Q4KWH8 1693 aa15.38■□□□□ 0.05
CYSTM1-203ENST00000509589 ABCA3Q99758 1704 aa15.38■□□□□ 0.05
CYSTM1-203ENST00000509589 SEPT12Q8IYM1 358 aa15.38■□□□□ 0.05
CYSTM1-203ENST00000509589 PHF8Q9UPP1 1060 aa15.38■□□□□ 0.05
CYSTM1-203ENST00000509589 SAFB2Q14151 953 aaKnown RBP eCLIP15.37■□□□□ 0.05
CYSTM1-203ENST00000509589 NRXN1Q9ULB1 1477 aa15.36■□□□□ 0.05
CYSTM1-203ENST00000509589 HAP1P54257 671 aaPredicted RBP15.36■□□□□ 0.05
CYSTM1-203ENST00000509589 VPS72Q15906 364 aa15.36■□□□□ 0.05
CYSTM1-203ENST00000509589 CFAP70Q5T0N1 1121 aa15.36■□□□□ 0.05
CYSTM1-203ENST00000509589 C14orf93Q9H972 538 aaKnown RBP15.36■□□□□ 0.05
CYSTM1-203ENST00000509589 PRAM1Q96QH2 718 aa15.35■□□□□ 0.05
CYSTM1-203ENST00000509589 NWD2Q9ULI1 1742 aa15.34■□□□□ 0.05
CYSTM1-203ENST00000509589 LMOD2Q6P5Q4 547 aa15.34■□□□□ 0.05
CYSTM1-203ENST00000509589 SIRT1Q96EB6 747 aa15.34■□□□□ 0.05
CYSTM1-203ENST00000509589 CCDC9Q9Y3X0 531 aaKnown RBP15.34■□□□□ 0.05
CYSTM1-203ENST00000509589 SBNO1A3KN83 1393 aa15.34■□□□□ 0.05
CYSTM1-203ENST00000509589 FAM83GA6ND36 823 aa15.33■□□□□ 0.04
CYSTM1-203ENST00000509589 PSME1Q06323 249 aa15.33■□□□□ 0.04
CYSTM1-203ENST00000509589 PMFBP1Q8TBY8 1022 aa15.33■□□□□ 0.04
CYSTM1-203ENST00000509589 ONECUT3O60422 494 aaPredicted RBP15.32■□□□□ 0.04
CYSTM1-203ENST00000509589 DHX57Q6P158 1386 aaKnown RBP15.32■□□□□ 0.04
CYSTM1-203ENST00000509589 KRT27Q7Z3Y8 459 aa15.31■□□□□ 0.04
CYSTM1-203ENST00000509589 ARHGEF10O15013 1369 aa15.31■□□□□ 0.04
CYSTM1-203ENST00000509589 SF3B2Q13435 895 aaKnown RBP15.3■□□□□ 0.04
CYSTM1-203ENST00000509589 NRAPQ86VF7 1730 aa15.3■□□□□ 0.04
CYSTM1-203ENST00000509589 TRPM3Q9HCF6 1732 aaPredicted RBP15.3■□□□□ 0.04
CYSTM1-203ENST00000509589 ANKARQ7Z5J8 1434 aa15.29■□□□□ 0.04
CYSTM1-203ENST00000509589 HIRIP3Q9BW71 556 aaPredicted RBP15.29■□□□□ 0.04
CYSTM1-203ENST00000509589 ADGRB2O60241 1585 aa15.28■□□□□ 0.04
CYSTM1-203ENST00000509589 DLC1Q96QB1 1528 aa15.28■□□□□ 0.04
CYSTM1-203ENST00000509589 A0A0G2JS52 829 aa15.28■□□□□ 0.04
CYSTM1-203ENST00000509589 MYT1Q01538 1121 aa15.28■□□□□ 0.04
CYSTM1-203ENST00000509589 FAM98CQ17RN3 349 aaKnown RBP15.28■□□□□ 0.04
CYSTM1-203ENST00000509589 ADGRB1O14514 1584 aa15.28■□□□□ 0.04
CYSTM1-203ENST00000509589 PRR36Q9H6K5 1346 aa15.27■□□□□ 0.04
CYSTM1-203ENST00000509589 PSDA5PKW4 1024 aaPredicted RBP15.27■□□□□ 0.04
CYSTM1-203ENST00000509589 FAM182BQ5T319 152 aa15.27■□□□□ 0.04
CYSTM1-203ENST00000509589 BTG4Q9NY30 223 aa15.27■□□□□ 0.04
CYSTM1-203ENST00000509589 POGKQ9P215 609 aa15.27■□□□□ 0.04
CYSTM1-203ENST00000509589 ALS2Q96Q42 1657 aa15.27■□□□□ 0.03
CYSTM1-203ENST00000509589 LRP5O75197 1615 aa15.27■□□□□ 0.03
CYSTM1-203ENST00000509589 MINK1Q8N4C8 1332 aaPredicted RBP15.25■□□□□ 0.03
CYSTM1-203ENST00000509589 TRAK1Q9UPV9 953 aa15.25■□□□□ 0.03
CYSTM1-203ENST00000509589 COL14A1Q05707 1796 aaKnown RBP15.24■□□□□ 0.03
CYSTM1-203ENST00000509589 ACIN1Q9UKV3 1341 aaKnown RBP15.24■□□□□ 0.03
CYSTM1-203ENST00000509589 CRYBG1Q9Y4K1 1723 aa15.23■□□□□ 0.03
CYSTM1-203ENST00000509589 TULP4Q9NRJ4 1543 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms