RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 RSPH4AQ5TD94 716 aa4.15□□□□□ -1.75
CAST-226ENST00000509529 RNF19BQ6ZMZ0 732 aa4.15□□□□□ -1.75
CAST-226ENST00000509529 BBXQ8WY36 941 aaPredicted RBP4.15□□□□□ -1.75
CAST-226ENST00000509529 NUTM2FA1L443 756 aa4.15□□□□□ -1.75
CAST-226ENST00000509529 ATP6V1AP38606 617 aa4.15□□□□□ -1.75
CAST-226ENST00000509529 BRICD5Q6PL45 260 aa4.15□□□□□ -1.75
CAST-226ENST00000509529 NPAS3Q8IXF0 933 aa4.15□□□□□ -1.75
CAST-226ENST00000509529 FECHP22830 423 aa4.14□□□□□ -1.75
CAST-226ENST00000509529 MSS51Q4VC12 460 aa4.14□□□□□ -1.75
CAST-226ENST00000509529 RDH13Q8NBN7 331 aa4.14□□□□□ -1.75
CAST-226ENST00000509529 TRIM46Q7Z4K8 759 aa4.14□□□□□ -1.75
CAST-226ENST00000509529 METTL3Q86U44 580 aaKnown RBP4.14□□□□□ -1.75
CAST-226ENST00000509529 REPIN1Q9BWE0 567 aaKnown RBP4.14□□□□□ -1.75
CAST-226ENST00000509529 SALL2Q9Y467 1007 aaPredicted RBP4.14□□□□□ -1.75
CAST-226ENST00000509529 KCTD17Q8N5Z5 321 aa4.13□□□□□ -1.75
CAST-226ENST00000509529 OATP04181 439 aa4.13□□□□□ -1.75
CAST-226ENST00000509529 SPRYD3Q8NCJ5 442 aa4.13□□□□□ -1.75
CAST-226ENST00000509529 GSK3AP49840 483 aa4.13□□□□□ -1.75
CAST-226ENST00000509529 SKOR1P84550 965 aa4.13□□□□□ -1.75
CAST-226ENST00000509529 RC3H1Q5TC82 1133 aaKnown RBP4.12□□□□□ -1.75
CAST-226ENST00000509529 DDX11L8A8MPP1 907 aa4.12□□□□□ -1.75
CAST-226ENST00000509529 ALDH1A1P00352 501 aa4.12□□□□□ -1.75
CAST-226ENST00000509529 FCHSD2O94868 740 aa4.11□□□□□ -1.75
CAST-226ENST00000509529 MMP16P51512 607 aa4.11□□□□□ -1.75
CAST-226ENST00000509529 NLRP7Q8WX94 980 aa4.11□□□□□ -1.75
CAST-226ENST00000509529 GCGRP47871 477 aa4.1□□□□□ -1.75
CAST-226ENST00000509529 DAXXQ9UER7 740 aaPredicted RBP4.1□□□□□ -1.75
CAST-226ENST00000509529 KCNMA1Q12791 1236 aa4.1□□□□□ -1.75
CAST-226ENST00000509529 CAPN5O15484 640 aaPredicted RBP4.1□□□□□ -1.75
CAST-226ENST00000509529 WNT7BP56706 349 aa4.09□□□□□ -1.75
CAST-226ENST00000509529 ARHGEF1Q92888 912 aaKnown RBP4.09□□□□□ -1.75
CAST-226ENST00000509529 DXOO77932 396 aaKnown RBP4.08□□□□□ -1.76
CAST-226ENST00000509529 ZFP42Q96MM3 310 aa4.08□□□□□ -1.76
CAST-226ENST00000509529 CCDC24Q8N4L8 307 aa4.08□□□□□ -1.76
CAST-226ENST00000509529 VSIG8P0DPA2 414 aa4.08□□□□□ -1.76
CAST-226ENST00000509529 KCNV2Q8TDN2 545 aa4.08□□□□□ -1.76
CAST-226ENST00000509529 SIAH2O43255 324 aa4.07□□□□□ -1.76
CAST-226ENST00000509529 HIC1Q14526 733 aa4.07□□□□□ -1.76
CAST-226ENST00000509529 SOBPA7XYQ1 873 aa4.06□□□□□ -1.76
CAST-226ENST00000509529 Q3C1V9 767 aa4.06□□□□□ -1.76
CAST-226ENST00000509529 SULF1Q8IWU6 871 aa4.06□□□□□ -1.76
CAST-226ENST00000509529 USB1Q9BQ65 265 aaKnown RBP4.06□□□□□ -1.76
CAST-226ENST00000509529 TMEM151AQ8N4L1 468 aa4.06□□□□□ -1.76
CAST-226ENST00000509529 CFAP44Q96MT7 982 aa4.06□□□□□ -1.76
CAST-226ENST00000509529 WASF2Q9Y6W5 498 aa4.06□□□□□ -1.76
CAST-226ENST00000509529 GDF11O95390 407 aa4.06□□□□□ -1.76
CAST-226ENST00000509529 RASSF7Q02833 373 aa4.06□□□□□ -1.76
CAST-226ENST00000509529 GRIPAP1Q4V328 841 aa4.06□□□□□ -1.76
CAST-226ENST00000509529 EHBP1Q8NDI1 1231 aa4.06□□□□□ -1.76
CAST-226ENST00000509529 PHOX2BQ99453 314 aa4.06□□□□□ -1.76
CAST-226ENST00000509529 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.06□□□□□ -1.76
CAST-226ENST00000509529 PAXIP1Q6ZW49 1069 aaPredicted RBP4.05□□□□□ -1.76
CAST-226ENST00000509529 HLA-CQ95604 372 aa4.04□□□□□ -1.76
CAST-226ENST00000509529 MRPL14Q6P1L8 145 aaKnown RBP4.03□□□□□ -1.76
CAST-226ENST00000509529 PURBQ96QR8 312 aaKnown RBP4.03□□□□□ -1.76
CAST-226ENST00000509529 SEMA3EO15041 775 aa4.03□□□□□ -1.76
CAST-226ENST00000509529 GNPATO15228 680 aa4.03□□□□□ -1.76
CAST-226ENST00000509529 PTCRAQ6ISU1 281 aaPredicted RBP4.03□□□□□ -1.76
CAST-226ENST00000509529 TLL2Q9Y6L7 1015 aa4.02□□□□□ -1.77
CAST-226ENST00000509529 XP32Q5T750 250 aa4.02□□□□□ -1.77
CAST-226ENST00000509529 GPR37O15354 613 aa4.01□□□□□ -1.77
CAST-226ENST00000509529 NISCHQ9Y2I1 1504 aa4.01□□□□□ -1.77
CAST-226ENST00000509529 RNF225M0QZC1 329 aaPredicted RBP4.01□□□□□ -1.77
CAST-226ENST00000509529 SH3BP2P78314 561 aa4.01□□□□□ -1.77
CAST-226ENST00000509529 SCARF1Q14162 830 aa4.01□□□□□ -1.77
CAST-226ENST00000509529 RBM26Q5T8P6 1007 aaKnown RBP4.01□□□□□ -1.77
CAST-226ENST00000509529 ADAMTS8Q9UP79 889 aa4.01□□□□□ -1.77
CAST-226ENST00000509529 JUNDP17535 347 aa4.01□□□□□ -1.77
CAST-226ENST00000509529 KRT76Q01546 638 aa4.01□□□□□ -1.77
CAST-226ENST00000509529 GPAT2Q6NUI2 795 aa4.01□□□□□ -1.77
CAST-226ENST00000509529 NUDT12Q9BQG2 462 aa4.01□□□□□ -1.77
CAST-226ENST00000509529 KDM4AO75164 1064 aa4□□□□□ -1.77
CAST-226ENST00000509529 CD46P15529 392 aa4□□□□□ -1.77
CAST-226ENST00000509529 TIMP2P16035 220 aa4□□□□□ -1.77
CAST-226ENST00000509529 NNTQ13423 1086 aa4□□□□□ -1.77
CAST-226ENST00000509529 PPFIA3O75145 1194 aa4□□□□□ -1.77
CAST-226ENST00000509529 SYMPKQ92797 1274 aaKnown RBP4□□□□□ -1.77
CAST-226ENST00000509529 GUCA2AQ02747 115 aa3.99□□□□□ -1.77
CAST-226ENST00000509529 WDR4P57081 412 aaKnown RBP3.99□□□□□ -1.77
CAST-226ENST00000509529 MAN1A2O60476 641 aa3.98□□□□□ -1.77
CAST-226ENST00000509529 ADH1CP00326 375 aa3.98□□□□□ -1.77
CAST-226ENST00000509529 LINC01559Q495D7 138 aa3.98□□□□□ -1.77
CAST-226ENST00000509529 DNMT3AQ9Y6K1 912 aaPredicted RBP3.98□□□□□ -1.77
CAST-226ENST00000509529 HOXA2O43364 376 aa3.98□□□□□ -1.77
CAST-226ENST00000509529 GPR161Q8N6U8 529 aaKnown RBP3.98□□□□□ -1.77
CAST-226ENST00000509529 CNTNAP3BQ96NU0 1288 aa3.98□□□□□ -1.77
CAST-226ENST00000509529 KLF16Q9BXK1 252 aaPredicted RBP3.98□□□□□ -1.77
CAST-226ENST00000509529 CNTNAP3Q9BZ76 1288 aa3.98□□□□□ -1.77
CAST-226ENST00000509529 IRS1P35568 1242 aa3.97□□□□□ -1.77
CAST-226ENST00000509529 C6orf118Q5T5N4 469 aa3.97□□□□□ -1.77
CAST-226ENST00000509529 KRTAP4-8Q9BYQ9 185 aa3.96□□□□□ -1.77
CAST-226ENST00000509529 PLEKHG3A1L390 1219 aa3.96□□□□□ -1.78
CAST-226ENST00000509529 IGHA1P01876 353 aa3.96□□□□□ -1.78
CAST-226ENST00000509529 USP46P62068 366 aa3.96□□□□□ -1.78
CAST-226ENST00000509529 ZNF385CQ66K41 422 aaPredicted RBP3.96□□□□□ -1.78
CAST-226ENST00000509529 UNC93B1Q9H1C4 597 aa3.96□□□□□ -1.78
CAST-226ENST00000509529 CCNYL3P0C7X3 344 aa3.96□□□□□ -1.78
CAST-226ENST00000509529 RETREG3Q86VR2 466 aa3.96□□□□□ -1.78
CAST-226ENST00000509529 BAP1Q92560 729 aa3.96□□□□□ -1.78
CAST-226ENST00000509529 ZFAND3Q9H8U3 227 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms