RNA–Protein interactions for RNA: ENST00000509317.5

COPS4-207, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-207ENST00000509317 BCL9LQ86UU0 1499 aa15.56■□□□□ 0.08
COPS4-207ENST00000509317 FOXO3O43524 673 aa15.55■□□□□ 0.08
COPS4-207ENST00000509317 VGFO15240 615 aaPredicted RBP15.53■□□□□ 0.08
COPS4-207ENST00000509317 PXDNQ92626 1479 aa15.52■□□□□ 0.08
COPS4-207ENST00000509317 PLEKHG5O94827 1062 aa15.52■□□□□ 0.08
COPS4-207ENST00000509317 STK26Q9P289 416 aa15.52■□□□□ 0.08
COPS4-207ENST00000509317 COL22A1Q8NFW1 1626 aaPredicted RBP15.52■□□□□ 0.08
COPS4-207ENST00000509317 NPHP3Q7Z494 1330 aa15.51■□□□□ 0.07
COPS4-207ENST00000509317 WAPLQ7Z5K2 1190 aa15.51■□□□□ 0.07
COPS4-207ENST00000509317 GJD4Q96KN9 370 aaPredicted RBP15.51■□□□□ 0.07
COPS4-207ENST00000509317 HFM1A2PYH4 1435 aa15.51■□□□□ 0.07
COPS4-207ENST00000509317 FOXD1Q16676 465 aa15.5■□□□□ 0.07
COPS4-207ENST00000509317 DEFB132Q7Z7B7 95 aa15.5■□□□□ 0.07
COPS4-207ENST00000509317 NAIPQ13075 1403 aa15.5■□□□□ 0.07
COPS4-207ENST00000509317 KIF1BO60333 1816 aa15.49■□□□□ 0.07
COPS4-207ENST00000509317 PRAG1Q86YV5 1406 aa15.49■□□□□ 0.07
COPS4-207ENST00000509317 PLEKHH1Q9ULM0 1364 aa15.49■□□□□ 0.07
COPS4-207ENST00000509317 ADGRF5Q8IZF2 1346 aa15.48■□□□□ 0.07
COPS4-207ENST00000509317 RALGAPBQ86X10 1494 aa15.47■□□□□ 0.07
COPS4-207ENST00000509317 GLI3P10071 1580 aa15.46■□□□□ 0.07
COPS4-207ENST00000509317 CDC42BPGQ6DT37 1551 aa15.46■□□□□ 0.07
COPS4-207ENST00000509317 TMEM132EQ6IEE7 984 aa15.46■□□□□ 0.07
COPS4-207ENST00000509317 UNC5CLQ8IV45 518 aa15.46■□□□□ 0.07
COPS4-207ENST00000509317 RGL3Q3MIN7 710 aa15.45■□□□□ 0.06
COPS4-207ENST00000509317 CCDC125Q86Z20 511 aa15.45■□□□□ 0.06
COPS4-207ENST00000509317 CABLES1Q8TDN4 633 aa15.45■□□□□ 0.06
COPS4-207ENST00000509317 SLC4A1APQ9BWU0 796 aaKnown RBP15.45■□□□□ 0.06
COPS4-207ENST00000509317 RPGRIP1LQ68CZ1 1315 aa15.44■□□□□ 0.06
COPS4-207ENST00000509317 SPATA31A3Q5VYP0 1347 aa15.43■□□□□ 0.06
COPS4-207ENST00000509317 SLIT2O94813 1529 aa15.43■□□□□ 0.06
COPS4-207ENST00000509317 SEPT12Q8IYM1 358 aa15.43■□□□□ 0.06
COPS4-207ENST00000509317 PPLO60437 1756 aa15.43■□□□□ 0.06
COPS4-207ENST00000509317 MARF1Q9Y4F3 1742 aaKnown RBP15.43■□□□□ 0.06
COPS4-207ENST00000509317 BLMP54132 1417 aaPredicted RBP15.43■□□□□ 0.06
COPS4-207ENST00000509317 KRT28Q7Z3Y7 464 aa15.41■□□□□ 0.06
COPS4-207ENST00000509317 LRPPRCP42704 1394 aaKnown RBP15.4■□□□□ 0.06
COPS4-207ENST00000509317 PSDA5PKW4 1024 aaPredicted RBP15.4■□□□□ 0.06
COPS4-207ENST00000509317 CCDC9Q9Y3X0 531 aaKnown RBP15.4■□□□□ 0.06
COPS4-207ENST00000509317 RRBP1Q9P2E9 1410 aaKnown RBP15.4■□□□□ 0.06
COPS4-207ENST00000509317 HAP1P54257 671 aaPredicted RBP15.39■□□□□ 0.05
COPS4-207ENST00000509317 BRWD3Q6RI45 1802 aa15.38■□□□□ 0.05
COPS4-207ENST00000509317 TECPR2O15040 1411 aa15.38■□□□□ 0.05
COPS4-207ENST00000509317 LMOD2Q6P5Q4 547 aa15.38■□□□□ 0.05
COPS4-207ENST00000509317 USP32Q8NFA0 1604 aa15.38■□□□□ 0.05
COPS4-207ENST00000509317 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.37■□□□□ 0.05
COPS4-207ENST00000509317 SAFB2Q14151 953 aaKnown RBP eCLIP15.37■□□□□ 0.05
COPS4-207ENST00000509317 ABCC11Q96J66 1382 aa15.36■□□□□ 0.05
COPS4-207ENST00000509317 CCDC144AA2RUR9 1427 aa15.36■□□□□ 0.05
COPS4-207ENST00000509317 SF3B2Q13435 895 aaKnown RBP15.36■□□□□ 0.05
COPS4-207ENST00000509317 VPS72Q15906 364 aa15.36■□□□□ 0.05
COPS4-207ENST00000509317 SPATA31E1Q6ZUB1 1445 aa15.35■□□□□ 0.05
COPS4-207ENST00000509317 FMN2Q9NZ56 1722 aa15.35■□□□□ 0.05
COPS4-207ENST00000509317 A0A0G2JS52 829 aa15.35■□□□□ 0.05
COPS4-207ENST00000509317 MYT1Q01538 1121 aa15.35■□□□□ 0.05
COPS4-207ENST00000509317 FAM182BQ5T319 152 aa15.35■□□□□ 0.05
COPS4-207ENST00000509317 KRT27Q7Z3Y8 459 aa15.35■□□□□ 0.05
COPS4-207ENST00000509317 PHF8Q9UPP1 1060 aa15.35■□□□□ 0.05
COPS4-207ENST00000509317 TNS3Q68CZ2 1445 aa15.34■□□□□ 0.05
COPS4-207ENST00000509317 YTHDC2Q9H6S0 1430 aaKnown RBP15.34■□□□□ 0.05
COPS4-207ENST00000509317 FAM83GA6ND36 823 aa15.34■□□□□ 0.05
COPS4-207ENST00000509317 FAM98CQ17RN3 349 aaKnown RBP15.33■□□□□ 0.04
COPS4-207ENST00000509317 PIK3C2GO75747 1445 aa15.33■□□□□ 0.04
COPS4-207ENST00000509317 PMFBP1Q8TBY8 1022 aa15.32■□□□□ 0.04
COPS4-207ENST00000509317 KIF1AQ12756 1690 aa15.32■□□□□ 0.04
COPS4-207ENST00000509317 PLCH1Q4KWH8 1693 aa15.32■□□□□ 0.04
COPS4-207ENST00000509317 ONECUT3O60422 494 aaPredicted RBP15.31■□□□□ 0.04
COPS4-207ENST00000509317 HRCP23327 699 aa15.31■□□□□ 0.04
COPS4-207ENST00000509317 ANKRD30BQ9BXX2 1392 aa15.31■□□□□ 0.04
COPS4-207ENST00000509317 RGPD8O14715 1765 aaPredicted RBP15.3■□□□□ 0.04
COPS4-207ENST00000509317 EN1Q05925 392 aaPredicted RBP15.3■□□□□ 0.04
COPS4-207ENST00000509317 PSME1Q06323 249 aa15.3■□□□□ 0.04
COPS4-207ENST00000509317 CFAP70Q5T0N1 1121 aa15.3■□□□□ 0.04
COPS4-207ENST00000509317 KNDC1Q76NI1 1749 aa15.3■□□□□ 0.04
COPS4-207ENST00000509317 PRAM1Q96QH2 718 aa15.3■□□□□ 0.04
COPS4-207ENST00000509317 IFT172Q9UG01 1749 aa15.29■□□□□ 0.04
COPS4-207ENST00000509317 NRXN1Q9ULB1 1477 aa15.28■□□□□ 0.04
COPS4-207ENST00000509317 SBNO1A3KN83 1393 aa15.28■□□□□ 0.04
COPS4-207ENST00000509317 MPHOSPH9Q99550 1183 aa15.28■□□□□ 0.04
COPS4-207ENST00000509317 BTG4Q9NY30 223 aa15.28■□□□□ 0.04
COPS4-207ENST00000509317 ABCA3Q99758 1704 aa15.28■□□□□ 0.04
COPS4-207ENST00000509317 LRP5O75197 1615 aa15.28■□□□□ 0.04
COPS4-207ENST00000509317 BAG6P46379 1132 aa15.27■□□□□ 0.04
COPS4-207ENST00000509317 R3HDM1Q15032 1099 aaKnown RBP15.27■□□□□ 0.04
COPS4-207ENST00000509317 HIRIP3Q9BW71 556 aaPredicted RBP15.27■□□□□ 0.04
COPS4-207ENST00000509317 C14orf93Q9H972 538 aaKnown RBP15.27■□□□□ 0.04
COPS4-207ENST00000509317 ARHGEF10O15013 1369 aa15.25■□□□□ 0.03
COPS4-207ENST00000509317 NWD2Q9ULI1 1742 aa15.25■□□□□ 0.03
COPS4-207ENST00000509317 SIRT1Q96EB6 747 aa15.24■□□□□ 0.03
COPS4-207ENST00000509317 NRAPQ86VF7 1730 aa15.23■□□□□ 0.03
COPS4-207ENST00000509317 PRR36Q9H6K5 1346 aa15.23■□□□□ 0.03
COPS4-207ENST00000509317 POGKQ9P215 609 aa15.23■□□□□ 0.03
COPS4-207ENST00000509317 DHX57Q6P158 1386 aaKnown RBP15.23■□□□□ 0.03
COPS4-207ENST00000509317 EZH2Q15910 746 aaKnown RBP15.22■□□□□ 0.03
COPS4-207ENST00000509317 SPATA31A5Q5VU36 1347 aa15.21■□□□□ 0.03
COPS4-207ENST00000509317 SPATA31A7Q8IWB4 1347 aa15.21■□□□□ 0.03
COPS4-207ENST00000509317 MINK1Q8N4C8 1332 aaPredicted RBP15.21■□□□□ 0.03
COPS4-207ENST00000509317 TRAK1Q9UPV9 953 aa15.2■□□□□ 0.02
COPS4-207ENST00000509317 TRPM3Q9HCF6 1732 aaPredicted RBP15.2■□□□□ 0.02
COPS4-207ENST00000509317 ACIN1Q9UKV3 1341 aaKnown RBP15.19■□□□□ 0.02
COPS4-207ENST00000509317 PAK3O75914 559 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms