RNA–Protein interactions for RNA: ENST00000509312.2

DDX4-209, Transcript of DEAD-box helicase 4, humanhuman

TSL 5

Gene DDX4, Length 486 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-209ENST00000509312 NUTM2EB1AL46 878 aaPredicted RBP13.07□□□□□ -0.32
DDX4-209ENST00000509312 COPS2P61201 443 aa13.07□□□□□ -0.32
DDX4-209ENST00000509312 NUTM2DQ5VT03 806 aaPredicted RBP13.07□□□□□ -0.32
DDX4-209ENST00000509312 PRPF38BQ5VTL8 546 aaKnown RBP13.07□□□□□ -0.32
DDX4-209ENST00000509312 NUTM2AQ8IVF1 878 aaPredicted RBP13.07□□□□□ -0.32
DDX4-209ENST00000509312 RNF166Q96A37 237 aaPredicted RBP13.07□□□□□ -0.32
DDX4-209ENST00000509312 ZBTB3Q9H5J0 574 aa13.07□□□□□ -0.32
DDX4-209ENST00000509312 C6orf229H3BNL8 230 aa13.06□□□□□ -0.32
DDX4-209ENST00000509312 MTMR2Q13614 643 aa13.05□□□□□ -0.32
DDX4-209ENST00000509312 THAP11Q96EK4 314 aa13.04□□□□□ -0.32
DDX4-209ENST00000509312 TIMELESSQ9UNS1 1208 aa13.04□□□□□ -0.32
DDX4-209ENST00000509312 CFAP99D6REC4 459 aa13.03□□□□□ -0.32
DDX4-209ENST00000509312 NYAP1Q6ZVC0 841 aa13.03□□□□□ -0.32
DDX4-209ENST00000509312 BRICD5Q6PL45 260 aa13.02□□□□□ -0.33
DDX4-209ENST00000509312 MTRQ99707 1265 aa13.02□□□□□ -0.33
DDX4-209ENST00000509312 NR1I2O75469 434 aa13.01□□□□□ -0.33
DDX4-209ENST00000509312 TJAP1Q5JTD0 557 aa13.01□□□□□ -0.33
DDX4-209ENST00000509312 ZNF516Q92618 1163 aa13.01□□□□□ -0.33
DDX4-209ENST00000509312 MMRN1Q13201 1228 aa13□□□□□ -0.33
DDX4-209ENST00000509312 Q3C1V9 767 aa12.99□□□□□ -0.33
DDX4-209ENST00000509312 PRR7Q8TB68 274 aa12.99□□□□□ -0.33
DDX4-209ENST00000509312 SNRKQ9NRH2 765 aa12.99□□□□□ -0.33
DDX4-209ENST00000509312 TLL1O43897 1013 aa12.98□□□□□ -0.33
DDX4-209ENST00000509312 AP1G2O75843 785 aa12.98□□□□□ -0.33
DDX4-209ENST00000509312 RETREG3Q86VR2 466 aa12.98□□□□□ -0.33
DDX4-209ENST00000509312 HCSTQ9UBK5 93 aa12.98□□□□□ -0.33
DDX4-209ENST00000509312 SALL2Q9Y467 1007 aaPredicted RBP12.98□□□□□ -0.33
DDX4-209ENST00000509312 CTDSPL2Q05D32 466 aa12.97□□□□□ -0.33
DDX4-209ENST00000509312 TMEM259Q4ZIN3 620 aa12.97□□□□□ -0.33
DDX4-209ENST00000509312 SPDYE5A6NIY4 337 aa12.96□□□□□ -0.33
DDX4-209ENST00000509312 ZPR1O75312 459 aa12.96□□□□□ -0.33
DDX4-209ENST00000509312 FMNL1O95466 1100 aaPredicted RBP12.96□□□□□ -0.33
DDX4-209ENST00000509312 MCM6Q14566 821 aa12.96□□□□□ -0.33
DDX4-209ENST00000509312 TSC1Q92574 1164 aa12.96□□□□□ -0.33
DDX4-209ENST00000509312 USB1Q9BQ65 265 aaKnown RBP12.96□□□□□ -0.33
DDX4-209ENST00000509312 FAM160A2Q8N612 972 aaPredicted RBP12.95□□□□□ -0.34
DDX4-209ENST00000509312 C14orf37Q86TY3 774 aa12.94□□□□□ -0.34
DDX4-209ENST00000509312 NKX2-3Q8TAU0 364 aa12.94□□□□□ -0.34
DDX4-209ENST00000509312 SPSB2Q99619 263 aa12.94□□□□□ -0.34
DDX4-209ENST00000509312 BANK1Q8NDB2 785 aa12.93□□□□□ -0.34
DDX4-209ENST00000509312 IL21Q9HBE4 155 aa12.93□□□□□ -0.34
DDX4-209ENST00000509312 PER1O15534 1290 aaPredicted RBP12.92□□□□□ -0.34
DDX4-209ENST00000509312 USP17L8P0C7I0 530 aa12.92□□□□□ -0.34
DDX4-209ENST00000509312 FLIIQ13045 1269 aa12.92□□□□□ -0.34
DDX4-209ENST00000509312 MTMR14Q8NCE2 650 aa12.91□□□□□ -0.34
DDX4-209ENST00000509312 LRRN4Q8WUT4 740 aa12.91□□□□□ -0.34
DDX4-209ENST00000509312 PRDM9Q9NQV7 894 aa12.91□□□□□ -0.34
DDX4-209ENST00000509312 HMX1Q9NP08 348 aaPredicted RBP12.89□□□□□ -0.35
DDX4-209ENST00000509312 HELBQ8NG08 1087 aaPredicted RBP12.88□□□□□ -0.35
DDX4-209ENST00000509312 ADH1BP00325 375 aa12.87□□□□□ -0.35
DDX4-209ENST00000509312 MSS51Q4VC12 460 aa12.86□□□□□ -0.35
DDX4-209ENST00000509312 DESI1Q6ICB0 168 aa12.86□□□□□ -0.35
DDX4-209ENST00000509312 POM121Q96HA1 1249 aa12.86□□□□□ -0.35
DDX4-209ENST00000509312 ITGBL1O95965 494 aaPredicted RBP12.84□□□□□ -0.35
DDX4-209ENST00000509312 JUNDP17535 347 aa12.84□□□□□ -0.35
DDX4-209ENST00000509312 LYPD8Q6UX82 237 aa12.84□□□□□ -0.35
DDX4-209ENST00000509312 EPS8L1Q8TE68 723 aa12.84□□□□□ -0.35
DDX4-209ENST00000509312 CLUAP1Q96AJ1 413 aa12.84□□□□□ -0.35
DDX4-209ENST00000509312 GJD4Q96KN9 370 aaPredicted RBP12.84□□□□□ -0.35
DDX4-209ENST00000509312 DXOO77932 396 aaKnown RBP12.83□□□□□ -0.36
DDX4-209ENST00000509312 MMP16P51512 607 aa12.82□□□□□ -0.36
DDX4-209ENST00000509312 TRIM34Q9BYJ4 488 aa12.82□□□□□ -0.36
DDX4-209ENST00000509312 S1PR4O95977 384 aa12.81□□□□□ -0.36
DDX4-209ENST00000509312 UBTFP17480 764 aaKnown RBP12.81□□□□□ -0.36
DDX4-209ENST00000509312 KCNC4Q03721 635 aa12.81□□□□□ -0.36
DDX4-209ENST00000509312 SLC6A16Q9GZN6 736 aa12.81□□□□□ -0.36
DDX4-209ENST00000509312 ZMYND15Q9H091 742 aa12.8□□□□□ -0.36
DDX4-209ENST00000509312 COG6Q9Y2V7 657 aa12.79□□□□□ -0.36
DDX4-209ENST00000509312 NR6A1Q15406 480 aa12.78□□□□□ -0.36
DDX4-209ENST00000509312 PTPRNQ16849 979 aa12.77□□□□□ -0.37
DDX4-209ENST00000509312 GDPD2Q9HCC8 539 aa12.77□□□□□ -0.37
DDX4-209ENST00000509312 MAP10Q9P2G4 905 aa12.77□□□□□ -0.37
DDX4-209ENST00000509312 TBC1D2BQ9UPU7 963 aa12.77□□□□□ -0.37
DDX4-209ENST00000509312 SOCS7O14512 581 aa12.76□□□□□ -0.37
DDX4-209ENST00000509312 GPR37L1O60883 481 aa12.76□□□□□ -0.37
DDX4-209ENST00000509312 F12P00748 615 aaPredicted RBP12.76□□□□□ -0.37
DDX4-209ENST00000509312 ERICH6Q7L0X2 663 aa12.76□□□□□ -0.37
DDX4-209ENST00000509312 PPEF1O14829 653 aaPredicted RBP12.75□□□□□ -0.37
DDX4-209ENST00000509312 NUDT12Q9BQG2 462 aa12.75□□□□□ -0.37
DDX4-209ENST00000509312 CCNYL3P0C7X3 344 aa12.73□□□□□ -0.37
DDX4-209ENST00000509312 PTCRAQ6ISU1 281 aaPredicted RBP12.73□□□□□ -0.37
DDX4-209ENST00000509312 EVA1BQ9NVM1 165 aa12.73□□□□□ -0.37
DDX4-209ENST00000509312 A6NJR5 290 aa12.71□□□□□ -0.37
DDX4-209ENST00000509312 CTHP32929 405 aa12.71□□□□□ -0.37
DDX4-209ENST00000509312 CCDC24Q8N4L8 307 aa12.71□□□□□ -0.37
DDX4-209ENST00000509312 RNF223E7ERA6 249 aa12.7□□□□□ -0.38
DDX4-209ENST00000509312 FNBP4Q8N3X1 1017 aaPredicted RBP12.7□□□□□ -0.38
DDX4-209ENST00000509312 FCF1Q9Y324 198 aaKnown RBP12.7□□□□□ -0.38
DDX4-209ENST00000509312 RAD21O60216 631 aa12.69□□□□□ -0.38
DDX4-209ENST00000509312 ABL2P42684 1182 aa12.69□□□□□ -0.38
DDX4-209ENST00000509312 KCNH2Q12809 1159 aa12.69□□□□□ -0.38
DDX4-209ENST00000509312 PPP1R18Q6NYC8 613 aa12.69□□□□□ -0.38
DDX4-209ENST00000509312 NDUFB9Q9Y6M9 179 aa12.69□□□□□ -0.38
DDX4-209ENST00000509312 IRF5Q13568 498 aa12.68□□□□□ -0.38
DDX4-209ENST00000509312 SUPT5HO00267 1087 aaKnown RBP12.67□□□□□ -0.38
DDX4-209ENST00000509312 PLA2G2CQ5R387 149 aa12.67□□□□□ -0.38
DDX4-209ENST00000509312 APBB1O00213 710 aa12.66□□□□□ -0.38
DDX4-209ENST00000509312 PROSER2Q86WR7 435 aaPredicted RBP12.66□□□□□ -0.38
DDX4-209ENST00000509312 TRAK2O60296 914 aa12.64□□□□□ -0.39
DDX4-209ENST00000509312 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms