RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 POLR3AO14802 1390 aaPredicted RBP12.3□□□□□ -0.44
HTT-205ENST00000509043 TNRQ92752 1358 aa12.3□□□□□ -0.44
HTT-205ENST00000509043 NSD3Q9BZ95 1437 aa12.3□□□□□ -0.44
HTT-205ENST00000509043 NLRP1Q9C000 1473 aa12.3□□□□□ -0.44
HTT-205ENST00000509043 SIRT1Q96EB6 747 aa12.3□□□□□ -0.44
HTT-205ENST00000509043 ABCC11Q96J66 1382 aa12.3□□□□□ -0.44
HTT-205ENST00000509043 MED14O60244 1454 aa12.27□□□□□ -0.44
HTT-205ENST00000509043 MLECQ14165 292 aa12.27□□□□□ -0.45
HTT-205ENST00000509043 NUTM2DQ5VT03 806 aaPredicted RBP12.27□□□□□ -0.45
HTT-205ENST00000509043 TERF2IPQ9NYB0 399 aa12.27□□□□□ -0.45
HTT-205ENST00000509043 POGKQ9P215 609 aa12.27□□□□□ -0.45
HTT-205ENST00000509043 SETD1AO15047 1707 aaKnown RBP12.27□□□□□ -0.45
HTT-205ENST00000509043 TECPR2O15040 1411 aa12.27□□□□□ -0.45
HTT-205ENST00000509043 NCBP3Q53F19 620 aaKnown RBP12.26□□□□□ -0.45
HTT-205ENST00000509043 MORC1Q86VD1 984 aa12.26□□□□□ -0.45
HTT-205ENST00000509043 SLC12A5Q9H2X9 1139 aa12.26□□□□□ -0.45
HTT-205ENST00000509043 ADAMTS8Q9UP79 889 aa12.26□□□□□ -0.45
HTT-205ENST00000509043 FAM135BQ49AJ0 1406 aa12.26□□□□□ -0.45
HTT-205ENST00000509043 PRAM1Q96QH2 718 aa12.25□□□□□ -0.45
HTT-205ENST00000509043 TMEM2Q9UHN6 1383 aa12.25□□□□□ -0.45
HTT-205ENST00000509043 KNDC1Q76NI1 1749 aa12.25□□□□□ -0.45
HTT-205ENST00000509043 SRPK2P78362 688 aaKnown RBP12.24□□□□□ -0.45
HTT-205ENST00000509043 BCANQ96GW7 911 aa12.24□□□□□ -0.45
HTT-205ENST00000509043 CFAP53Q96M91 514 aa12.24□□□□□ -0.45
HTT-205ENST00000509043 UBR1Q8IWV7 1749 aa12.23□□□□□ -0.45
HTT-205ENST00000509043 NRXN3Q9Y4C0 1643 aa12.23□□□□□ -0.45
HTT-205ENST00000509043 ATP7BP35670 1465 aa12.23□□□□□ -0.45
HTT-205ENST00000509043 STK26Q9P289 416 aa12.23□□□□□ -0.45
HTT-205ENST00000509043 HDGFL2Q7Z4V5 671 aaPredicted RBP12.22□□□□□ -0.45
HTT-205ENST00000509043 RCAN3Q9UKA8 241 aa12.22□□□□□ -0.45
HTT-205ENST00000509043 CPS1P31327 1500 aa12.21□□□□□ -0.45
HTT-205ENST00000509043 PLEKHG1Q9ULL1 1385 aa12.21□□□□□ -0.45
HTT-205ENST00000509043 ZNF521Q96K83 1311 aa12.21□□□□□ -0.45
HTT-205ENST00000509043 CABP2Q9NPB3 220 aa12.21□□□□□ -0.45
HTT-205ENST00000509043 A0A1W2PP64 1363 aa12.2□□□□□ -0.46
HTT-205ENST00000509043 ANKRD26Q9UPS8 1709 aa12.2□□□□□ -0.46
HTT-205ENST00000509043 MINK1Q8N4C8 1332 aaPredicted RBP12.19□□□□□ -0.46
HTT-205ENST00000509043 RRP1P56182 461 aaKnown RBP12.19□□□□□ -0.46
HTT-205ENST00000509043 GOLGA2Q08379 1002 aa12.19□□□□□ -0.46
HTT-205ENST00000509043 CDK19Q9BWU1 502 aa12.19□□□□□ -0.46
HTT-205ENST00000509043 SLIT1O75093 1534 aa12.19□□□□□ -0.46
HTT-205ENST00000509043 EID1Q9Y6B2 187 aa12.18□□□□□ -0.46
HTT-205ENST00000509043 CD163L1Q9NR16 1453 aa12.18□□□□□ -0.46
HTT-205ENST00000509043 ARHGAP23Q9P227 1491 aa12.18□□□□□ -0.46
HTT-205ENST00000509043 IRX6P78412 446 aaPredicted RBP12.17□□□□□ -0.46
HTT-205ENST00000509043 DIP2AQ14689 1571 aa12.17□□□□□ -0.46
HTT-205ENST00000509043 METP08581 1390 aa12.17□□□□□ -0.46
HTT-205ENST00000509043 FER1L4A9Z1Z3 1794 aa12.16□□□□□ -0.46
HTT-205ENST00000509043 E9PSI1 815 aa12.16□□□□□ -0.46
HTT-205ENST00000509043 WASLO00401 505 aaPredicted RBP12.16□□□□□ -0.46
HTT-205ENST00000509043 SAFB2Q14151 953 aaKnown RBP eCLIP12.16□□□□□ -0.46
HTT-205ENST00000509043 RUNDC1Q96C34 613 aa12.16□□□□□ -0.46
HTT-205ENST00000509043 ADGRB2O60241 1585 aa12.16□□□□□ -0.46
HTT-205ENST00000509043 PLEKHH1Q9ULM0 1364 aa12.16□□□□□ -0.46
HTT-205ENST00000509043 C3P01024 1663 aa12.16□□□□□ -0.46
HTT-205ENST00000509043 SHPRHQ149N8 1683 aa12.16□□□□□ -0.46
HTT-205ENST00000509043 ADAMTS13Q76LX8 1427 aa12.15□□□□□ -0.46
HTT-205ENST00000509043 CCDC27Q2M243 656 aa12.15□□□□□ -0.46
HTT-205ENST00000509043 TRMT2AQ8IZ69 625 aaKnown RBP12.15□□□□□ -0.46
HTT-205ENST00000509043 PNNQ9H307 717 aaKnown RBP12.15□□□□□ -0.46
HTT-205ENST00000509043 TSHZ2Q9NRE2 1034 aa12.15□□□□□ -0.46
HTT-205ENST00000509043 EDC4Q6P2E9 1401 aaKnown RBP12.14□□□□□ -0.47
HTT-205ENST00000509043 MTHFSP49914 203 aa12.14□□□□□ -0.47
HTT-205ENST00000509043 SLFN5Q08AF3 891 aa12.14□□□□□ -0.47
HTT-205ENST00000509043 THEMISQ8N1K5 641 aaPredicted RBP12.14□□□□□ -0.47
HTT-205ENST00000509043 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.14□□□□□ -0.47
HTT-205ENST00000509043 CDC42BPGQ6DT37 1551 aa12.13□□□□□ -0.47
HTT-205ENST00000509043 CPSF1Q10570 1443 aaKnown RBP12.13□□□□□ -0.47
HTT-205ENST00000509043 FYB1O15117 783 aa12.13□□□□□ -0.47
HTT-205ENST00000509043 DUSP27Q5VZP5 1158 aa12.13□□□□□ -0.47
HTT-205ENST00000509043 CDCA7LQ96GN5 454 aa12.13□□□□□ -0.47
HTT-205ENST00000509043 ZNF692Q9BU19 519 aaPredicted RBP12.13□□□□□ -0.47
HTT-205ENST00000509043 TBX22Q9Y458 520 aa12.13□□□□□ -0.47
HTT-205ENST00000509043 SALL2Q9Y467 1007 aaPredicted RBP12.13□□□□□ -0.47
HTT-205ENST00000509043 KIF20BQ96Q89 1820 aa12.13□□□□□ -0.47
HTT-205ENST00000509043 APAF1O14727 1248 aa12.12□□□□□ -0.47
HTT-205ENST00000509043 WAPLQ7Z5K2 1190 aa12.12□□□□□ -0.47
HTT-205ENST00000509043 WDR63Q8IWG1 891 aa12.12□□□□□ -0.47
HTT-205ENST00000509043 CABP1Q9NZU7 370 aa12.12□□□□□ -0.47
HTT-205ENST00000509043 CCDC61Q9Y6R9 512 aa12.12□□□□□ -0.47
HTT-205ENST00000509043 NKTRP30414 1462 aaKnown RBP12.12□□□□□ -0.47
HTT-205ENST00000509043 IQSEC2Q5JU85 1478 aa12.12□□□□□ -0.47
HTT-205ENST00000509043 PTCH1Q13635 1447 aa12.11□□□□□ -0.47
HTT-205ENST00000509043 PNPLA6Q8IY17 1366 aa12.11□□□□□ -0.47
HTT-205ENST00000509043 PIK3R4Q99570 1358 aa12.11□□□□□ -0.47
HTT-205ENST00000509043 TRHP20396 242 aaPredicted RBP12.11□□□□□ -0.47
HTT-205ENST00000509043 TXNDC2Q86VQ3 553 aa12.11□□□□□ -0.47
HTT-205ENST00000509043 CCDC136Q96JN2 1154 aa12.11□□□□□ -0.47
HTT-205ENST00000509043 PPIP5K1Q6PFW1 1433 aa12.11□□□□□ -0.47
HTT-205ENST00000509043 COL3A1P02461 1466 aaPredicted RBP12.09□□□□□ -0.47
HTT-205ENST00000509043 AATKQ6ZMQ8 1374 aa12.09□□□□□ -0.47
HTT-205ENST00000509043 CCDC146Q8IYE0 955 aa12.09□□□□□ -0.47
HTT-205ENST00000509043 NUDT16Q96DE0 195 aaKnown RBP12.09□□□□□ -0.47
HTT-205ENST00000509043 LTKP29376 864 aa12.08□□□□□ -0.48
HTT-205ENST00000509043 TNNT2P45379 298 aaPredicted RBP12.08□□□□□ -0.48
HTT-205ENST00000509043 B4GALNT3Q6L9W6 998 aa12.08□□□□□ -0.48
HTT-205ENST00000509043 WWC1Q8IX03 1113 aa12.08□□□□□ -0.48
HTT-205ENST00000509043 GGNBP2Q9H3C7 697 aa12.08□□□□□ -0.48
HTT-205ENST00000509043 MON2Q7Z3U7 1717 aa12.08□□□□□ -0.48
HTT-205ENST00000509043 ROBO2Q9HCK4 1378 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms