RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 MSS51Q4VC12 460 aa6.79□□□□□ -1.32
DEPDC1B-204ENST00000509006 P3H3Q8IVL6 736 aa6.79□□□□□ -1.32
DEPDC1B-204ENST00000509006 PHOX2BQ99453 314 aa6.79□□□□□ -1.32
DEPDC1B-204ENST00000509006 ATP13A2Q9NQ11 1180 aa6.79□□□□□ -1.32
DEPDC1B-204ENST00000509006 STK17AQ9UEE5 414 aa6.79□□□□□ -1.32
DEPDC1B-204ENST00000509006 WNT7AO00755 349 aa6.78□□□□□ -1.32
DEPDC1B-204ENST00000509006 TRIM32Q13049 653 aa6.78□□□□□ -1.32
DEPDC1B-204ENST00000509006 SALL2Q9Y467 1007 aaPredicted RBP6.78□□□□□ -1.32
DEPDC1B-204ENST00000509006 LOC100996750A0A140TA64 210 aa6.77□□□□□ -1.33
DEPDC1B-204ENST00000509006 J3QL48 77 aa6.77□□□□□ -1.33
DEPDC1B-204ENST00000509006 SNIP1Q8TAD8 396 aaKnown RBP6.77□□□□□ -1.33
DEPDC1B-204ENST00000509006 MRGPRX2Q96LB1 330 aa6.77□□□□□ -1.33
DEPDC1B-204ENST00000509006 KRTAP4-6Q9BYQ5 205 aa6.77□□□□□ -1.33
DEPDC1B-204ENST00000509006 INSM1Q01101 510 aaPredicted RBP6.76□□□□□ -1.33
DEPDC1B-204ENST00000509006 SULF1Q8IWU6 871 aa6.76□□□□□ -1.33
DEPDC1B-204ENST00000509006 TRIM47Q96LD4 638 aa6.76□□□□□ -1.33
DEPDC1B-204ENST00000509006 TESPA1A2RU30 521 aaPredicted RBP6.75□□□□□ -1.33
DEPDC1B-204ENST00000509006 TERTO14746 1132 aaKnown RBP6.75□□□□□ -1.33
DEPDC1B-204ENST00000509006 HPS1Q92902 700 aa6.74□□□□□ -1.33
DEPDC1B-204ENST00000509006 MMP16P51512 607 aa6.73□□□□□ -1.33
DEPDC1B-204ENST00000509006 SENP2Q9HC62 589 aa6.73□□□□□ -1.33
DEPDC1B-204ENST00000509006 GRIPAP1Q4V328 841 aa6.71□□□□□ -1.34
DEPDC1B-204ENST00000509006 DXOO77932 396 aaKnown RBP6.7□□□□□ -1.34
DEPDC1B-204ENST00000509006 SKOR1P84550 965 aa6.7□□□□□ -1.34
DEPDC1B-204ENST00000509006 Q3C1V9 767 aa6.7□□□□□ -1.34
DEPDC1B-204ENST00000509006 HLA-CQ95604 372 aa6.7□□□□□ -1.34
DEPDC1B-204ENST00000509006 REPIN1Q9BWE0 567 aaKnown RBP6.7□□□□□ -1.34
DEPDC1B-204ENST00000509006 PLCB2Q00722 1185 aa6.69□□□□□ -1.34
DEPDC1B-204ENST00000509006 RC3H1Q5TC82 1133 aaKnown RBP6.69□□□□□ -1.34
DEPDC1B-204ENST00000509006 SMYD5Q6GMV2 418 aa6.69□□□□□ -1.34
DEPDC1B-204ENST00000509006 CCDC24Q8N4L8 307 aa6.69□□□□□ -1.34
DEPDC1B-204ENST00000509006 USB1Q9BQ65 265 aaKnown RBP6.69□□□□□ -1.34
DEPDC1B-204ENST00000509006 CD46P15529 392 aa6.68□□□□□ -1.34
DEPDC1B-204ENST00000509006 KIFC2Q96AC6 838 aa6.68□□□□□ -1.34
DEPDC1B-204ENST00000509006 BMP1P13497 986 aa6.67□□□□□ -1.34
DEPDC1B-204ENST00000509006 KDM4AO75164 1064 aa6.66□□□□□ -1.34
DEPDC1B-204ENST00000509006 ALDH1A1P00352 501 aa6.66□□□□□ -1.34
DEPDC1B-204ENST00000509006 GPIHBP1Q8IV16 184 aa6.66□□□□□ -1.34
DEPDC1B-204ENST00000509006 WNT7BP56706 349 aa6.65□□□□□ -1.34
DEPDC1B-204ENST00000509006 GMPRP36959 345 aa6.64□□□□□ -1.35
DEPDC1B-204ENST00000509006 VEGFBP49765 207 aa6.64□□□□□ -1.35
DEPDC1B-204ENST00000509006 GUCA2AQ02747 115 aa6.64□□□□□ -1.35
DEPDC1B-204ENST00000509006 HOXA2O43364 376 aa6.63□□□□□ -1.35
DEPDC1B-204ENST00000509006 LORP23490 312 aaPredicted RBP6.63□□□□□ -1.35
DEPDC1B-204ENST00000509006 TRIM46Q7Z4K8 759 aa6.63□□□□□ -1.35
DEPDC1B-204ENST00000509006 SLC16A10Q8TF71 515 aa6.63□□□□□ -1.35
DEPDC1B-204ENST00000509006 SYMPKQ92797 1274 aaKnown RBP6.63□□□□□ -1.35
DEPDC1B-204ENST00000509006 NXF1Q9UBU9 619 aaKnown RBP6.63□□□□□ -1.35
DEPDC1B-204ENST00000509006 JUNDP17535 347 aa6.62□□□□□ -1.35
DEPDC1B-204ENST00000509006 SIAH2O43255 324 aa6.61□□□□□ -1.35
DEPDC1B-204ENST00000509006 USP46P62068 366 aa6.61□□□□□ -1.35
DEPDC1B-204ENST00000509006 MDM2Q00987 491 aaPredicted RBP6.61□□□□□ -1.35
DEPDC1B-204ENST00000509006 PTCRAQ6ISU1 281 aaPredicted RBP6.61□□□□□ -1.35
DEPDC1B-204ENST00000509006 EHBP1Q8NDI1 1231 aa6.61□□□□□ -1.35
DEPDC1B-204ENST00000509006 ERBB4Q15303 1308 aa6.6□□□□□ -1.35
DEPDC1B-204ENST00000509006 FAM181BA6NEQ2 426 aa6.6□□□□□ -1.35
DEPDC1B-204ENST00000509006 CAPN5O15484 640 aaPredicted RBP6.6□□□□□ -1.35
DEPDC1B-204ENST00000509006 MAP2K5Q13163 448 aa6.6□□□□□ -1.35
DEPDC1B-204ENST00000509006 ZSCAN1Q8NBB4 408 aa6.6□□□□□ -1.35
DEPDC1B-204ENST00000509006 NUDT12Q9BQG2 462 aa6.6□□□□□ -1.35
DEPDC1B-204ENST00000509006 IRF7Q92985 503 aa6.59□□□□□ -1.35
DEPDC1B-204ENST00000509006 WASF2Q9Y6W5 498 aa6.59□□□□□ -1.35
DEPDC1B-204ENST00000509006 H3BM21 787 aa6.58□□□□□ -1.36
DEPDC1B-204ENST00000509006 KDM2AQ9Y2K7 1162 aa6.58□□□□□ -1.36
DEPDC1B-204ENST00000509006 SH3BP2P78314 561 aa6.57□□□□□ -1.36
DEPDC1B-204ENST00000509006 NPAS3Q8IXF0 933 aa6.57□□□□□ -1.36
DEPDC1B-204ENST00000509006 TLL2Q9Y6L7 1015 aa6.57□□□□□ -1.36
DEPDC1B-204ENST00000509006 RETREG3Q86VR2 466 aa6.56□□□□□ -1.36
DEPDC1B-204ENST00000509006 ZFP42Q96MM3 310 aa6.56□□□□□ -1.36
DEPDC1B-204ENST00000509006 IRF6O14896 467 aa6.55□□□□□ -1.36
DEPDC1B-204ENST00000509006 LINC01559Q495D7 138 aa6.55□□□□□ -1.36
DEPDC1B-204ENST00000509006 CCNYL3P0C7X3 344 aa6.54□□□□□ -1.36
DEPDC1B-204ENST00000509006 CCDC102AQ96A19 550 aa6.54□□□□□ -1.36
DEPDC1B-204ENST00000509006 PCDHGC3Q9UN70 934 aa6.54□□□□□ -1.36
DEPDC1B-204ENST00000509006 SOBPA7XYQ1 873 aa6.53□□□□□ -1.36
DEPDC1B-204ENST00000509006 MS4A1P11836 297 aa6.53□□□□□ -1.36
DEPDC1B-204ENST00000509006 HAP1P54257 671 aaPredicted RBP6.53□□□□□ -1.36
DEPDC1B-204ENST00000509006 UNC93B1Q9H1C4 597 aa6.53□□□□□ -1.36
DEPDC1B-204ENST00000509006 GPCPD1Q9NPB8 672 aa6.53□□□□□ -1.36
DEPDC1B-204ENST00000509006 FAM217BQ9NTX9 383 aaPredicted RBP6.53□□□□□ -1.36
DEPDC1B-204ENST00000509006 C6orf229H3BNL8 230 aa6.52□□□□□ -1.37
DEPDC1B-204ENST00000509006 NUTM1Q86Y26 1132 aa6.52□□□□□ -1.37
DEPDC1B-204ENST00000509006 FDX1P10109 184 aa6.51□□□□□ -1.37
DEPDC1B-204ENST00000509006 NNTQ13423 1086 aa6.51□□□□□ -1.37
DEPDC1B-204ENST00000509006 MRPL14Q6P1L8 145 aaKnown RBP6.51□□□□□ -1.37
DEPDC1B-204ENST00000509006 BAP1Q92560 729 aa6.51□□□□□ -1.37
DEPDC1B-204ENST00000509006 PURBQ96QR8 312 aaKnown RBP6.51□□□□□ -1.37
DEPDC1B-204ENST00000509006 MINK1Q8N4C8 1332 aaPredicted RBP6.5□□□□□ -1.37
DEPDC1B-204ENST00000509006 CLCN1P35523 988 aa6.5□□□□□ -1.37
DEPDC1B-204ENST00000509006 PTPRNQ16849 979 aa6.5□□□□□ -1.37
DEPDC1B-204ENST00000509006 TIMP2P16035 220 aa6.49□□□□□ -1.37
DEPDC1B-204ENST00000509006 SUZ12Q15022 739 aaKnown RBP6.49□□□□□ -1.37
DEPDC1B-204ENST00000509006 ZNF511Q8NB15 262 aa6.49□□□□□ -1.37
DEPDC1B-204ENST00000509006 NDUFV2P19404 249 aa6.48□□□□□ -1.37
DEPDC1B-204ENST00000509006 WDR4P57081 412 aaKnown RBP6.48□□□□□ -1.37
DEPDC1B-204ENST00000509006 EVA1BQ9NVM1 165 aa6.48□□□□□ -1.37
DEPDC1B-204ENST00000509006 PLEKHG3A1L390 1219 aa6.47□□□□□ -1.37
DEPDC1B-204ENST00000509006 ADH1CP00326 375 aa6.47□□□□□ -1.37
DEPDC1B-204ENST00000509006 VSIG8P0DPA2 414 aa6.47□□□□□ -1.37
DEPDC1B-204ENST00000509006 VARSP26640 1264 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms