RNA–Protein interactions for RNA: ENST00000508854.1

SH3D21-206, Transcript of SH3 domain containing 21, humanhuman

TSL 5

Gene SH3D21, Length 1,134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-206ENST00000508854 NPHP3Q7Z494 1330 aa15.04■□□□□ -0
SH3D21-206ENST00000508854 FNBP4Q8N3X1 1017 aaPredicted RBP15.04■□□□□ -0
SH3D21-206ENST00000508854 LRPPRCP42704 1394 aaKnown RBP15.03■□□□□ -0
SH3D21-206ENST00000508854 ESCO1Q5FWF5 840 aa15.03■□□□□ -0
SH3D21-206ENST00000508854 CCDC125Q86Z20 511 aa15□□□□□ -0.01
SH3D21-206ENST00000508854 PPLO60437 1756 aa15□□□□□ -0.01
SH3D21-206ENST00000508854 COL22A1Q8NFW1 1626 aaPredicted RBP14.99□□□□□ -0.01
SH3D21-206ENST00000508854 CDC42BPGQ6DT37 1551 aa14.98□□□□□ -0.01
SH3D21-206ENST00000508854 ATRNO75882 1429 aa14.98□□□□□ -0.01
SH3D21-206ENST00000508854 ANKRD30BQ9BXX2 1392 aa14.98□□□□□ -0.01
SH3D21-206ENST00000508854 FOXO3O43524 673 aa14.97□□□□□ -0.01
SH3D21-206ENST00000508854 CCDC144AA2RUR9 1427 aa14.97□□□□□ -0.01
SH3D21-206ENST00000508854 ACIN1Q9UKV3 1341 aaKnown RBP14.96□□□□□ -0.01
SH3D21-206ENST00000508854 MYOM2P54296 1465 aa14.95□□□□□ -0.02
SH3D21-206ENST00000508854 STK26Q9P289 416 aa14.95□□□□□ -0.02
SH3D21-206ENST00000508854 ZRANB1Q9UGI0 708 aa14.95□□□□□ -0.02
SH3D21-206ENST00000508854 ABCC11Q96J66 1382 aa14.95□□□□□ -0.02
SH3D21-206ENST00000508854 ADGRF5Q8IZF2 1346 aa14.94□□□□□ -0.02
SH3D21-206ENST00000508854 TECPR2O15040 1411 aa14.94□□□□□ -0.02
SH3D21-206ENST00000508854 RGL3Q3MIN7 710 aa14.94□□□□□ -0.02
SH3D21-206ENST00000508854 GJD4Q96KN9 370 aaPredicted RBP14.94□□□□□ -0.02
SH3D21-206ENST00000508854 PXDNQ92626 1479 aa14.94□□□□□ -0.02
SH3D21-206ENST00000508854 WAPLQ7Z5K2 1190 aa14.93□□□□□ -0.02
SH3D21-206ENST00000508854 SIRT1Q96EB6 747 aa14.93□□□□□ -0.02
SH3D21-206ENST00000508854 MARF1Q9Y4F3 1742 aaKnown RBP14.92□□□□□ -0.02
SH3D21-206ENST00000508854 BCL9LQ86UU0 1499 aa14.92□□□□□ -0.02
SH3D21-206ENST00000508854 XPCQ01831 940 aaPredicted RBP14.91□□□□□ -0.02
SH3D21-206ENST00000508854 PSME1Q06323 249 aa14.91□□□□□ -0.02
SH3D21-206ENST00000508854 UNC5CLQ8IV45 518 aa14.91□□□□□ -0.02
SH3D21-206ENST00000508854 MPHOSPH9Q99550 1183 aa14.91□□□□□ -0.02
SH3D21-206ENST00000508854 NUTM2FA1L443 756 aa14.9□□□□□ -0.02
SH3D21-206ENST00000508854 SPATA31E1Q6ZUB1 1445 aa14.9□□□□□ -0.02
SH3D21-206ENST00000508854 SPATA31A3Q5VYP0 1347 aa14.9□□□□□ -0.02
SH3D21-206ENST00000508854 KNDC1Q76NI1 1749 aa14.89□□□□□ -0.03
SH3D21-206ENST00000508854 HAP1P54257 671 aaPredicted RBP14.89□□□□□ -0.03
SH3D21-206ENST00000508854 TMEM132EQ6IEE7 984 aa14.89□□□□□ -0.03
SH3D21-206ENST00000508854 KRT28Q7Z3Y7 464 aa14.89□□□□□ -0.03
SH3D21-206ENST00000508854 KIF1AQ12756 1690 aa14.89□□□□□ -0.03
SH3D21-206ENST00000508854 PIK3C2GO75747 1445 aa14.88□□□□□ -0.03
SH3D21-206ENST00000508854 YTHDC2Q9H6S0 1430 aaKnown RBP14.88□□□□□ -0.03
SH3D21-206ENST00000508854 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.88□□□□□ -0.03
SH3D21-206ENST00000508854 EP400Q96L91 3159 aa14.87□□□□□ -0.03
SH3D21-206ENST00000508854 SRCAPQ6ZRS2 3230 aa14.87□□□□□ -0.03
SH3D21-206ENST00000508854 IFT172Q9UG01 1749 aa14.87□□□□□ -0.03
SH3D21-206ENST00000508854 DHX57Q6P158 1386 aaKnown RBP14.86□□□□□ -0.03
SH3D21-206ENST00000508854 FMN2Q9NZ56 1722 aa14.86□□□□□ -0.03
SH3D21-206ENST00000508854 SF3B2Q13435 895 aaKnown RBP14.86□□□□□ -0.03
SH3D21-206ENST00000508854 C14orf93Q9H972 538 aaKnown RBP14.86□□□□□ -0.03
SH3D21-206ENST00000508854 PHF8Q9UPP1 1060 aa14.85□□□□□ -0.03
SH3D21-206ENST00000508854 SLIT2O94813 1529 aa14.85□□□□□ -0.03
SH3D21-206ENST00000508854 PLEKHH1Q9ULM0 1364 aa14.85□□□□□ -0.03
SH3D21-206ENST00000508854 RALGAPBQ86X10 1494 aa14.84□□□□□ -0.03
SH3D21-206ENST00000508854 BLMP54132 1417 aaPredicted RBP14.83□□□□□ -0.03
SH3D21-206ENST00000508854 VPS72Q15906 364 aa14.83□□□□□ -0.04
SH3D21-206ENST00000508854 SBNO1A3KN83 1393 aa14.83□□□□□ -0.04
SH3D21-206ENST00000508854 ARHGEF10O15013 1369 aa14.83□□□□□ -0.04
SH3D21-206ENST00000508854 TNS3Q68CZ2 1445 aa14.83□□□□□ -0.04
SH3D21-206ENST00000508854 USP32Q8NFA0 1604 aa14.82□□□□□ -0.04
SH3D21-206ENST00000508854 LMOD2Q6P5Q4 547 aa14.81□□□□□ -0.04
SH3D21-206ENST00000508854 SEPT12Q8IYM1 358 aa14.81□□□□□ -0.04
SH3D21-206ENST00000508854 POGKQ9P215 609 aa14.81□□□□□ -0.04
SH3D21-206ENST00000508854 CCDC9Q9Y3X0 531 aaKnown RBP14.81□□□□□ -0.04
SH3D21-206ENST00000508854 ONECUT3O60422 494 aaPredicted RBP14.8□□□□□ -0.04
SH3D21-206ENST00000508854 CFAP70Q5T0N1 1121 aa14.8□□□□□ -0.04
SH3D21-206ENST00000508854 PRAM1Q96QH2 718 aa14.8□□□□□ -0.04
SH3D21-206ENST00000508854 GLI3P10071 1580 aa14.8□□□□□ -0.04
SH3D21-206ENST00000508854 ANKARQ7Z5J8 1434 aa14.79□□□□□ -0.04
SH3D21-206ENST00000508854 NRXN1Q9ULB1 1477 aa14.79□□□□□ -0.04
SH3D21-206ENST00000508854 NWD2Q9ULI1 1742 aa14.79□□□□□ -0.04
SH3D21-206ENST00000508854 EIF3AQ14152 1382 aaKnown RBP14.78□□□□□ -0.04
SH3D21-206ENST00000508854 KRT27Q7Z3Y8 459 aa14.78□□□□□ -0.04
SH3D21-206ENST00000508854 RGPD8O14715 1765 aaPredicted RBP14.78□□□□□ -0.04
SH3D21-206ENST00000508854 CABLES1Q8TDN4 633 aa14.77□□□□□ -0.05
SH3D21-206ENST00000508854 DLC1Q96QB1 1528 aa14.76□□□□□ -0.05
SH3D21-206ENST00000508854 GPRASP1Q5JY77 1395 aa14.76□□□□□ -0.05
SH3D21-206ENST00000508854 SAFB2Q14151 953 aaKnown RBP eCLIP14.76□□□□□ -0.05
SH3D21-206ENST00000508854 STAC3Q96MF2 364 aa14.76□□□□□ -0.05
SH3D21-206ENST00000508854 FAM83GA6ND36 823 aa14.75□□□□□ -0.05
SH3D21-206ENST00000508854 PLEKHG5O94827 1062 aa14.75□□□□□ -0.05
SH3D21-206ENST00000508854 PMFBP1Q8TBY8 1022 aa14.75□□□□□ -0.05
SH3D21-206ENST00000508854 BRWD3Q6RI45 1802 aa14.75□□□□□ -0.05
SH3D21-206ENST00000508854 A0A0G2JS52 829 aa14.74□□□□□ -0.05
SH3D21-206ENST00000508854 MYT1Q01538 1121 aa14.74□□□□□ -0.05
SH3D21-206ENST00000508854 DEFB132Q7Z7B7 95 aa14.74□□□□□ -0.05
SH3D21-206ENST00000508854 PLCH1Q4KWH8 1693 aa14.74□□□□□ -0.05
SH3D21-206ENST00000508854 BAG6P46379 1132 aa14.73□□□□□ -0.05
SH3D21-206ENST00000508854 BTG4Q9NY30 223 aa14.72□□□□□ -0.05
SH3D21-206ENST00000508854 ADGRB2O60241 1585 aa14.72□□□□□ -0.05
SH3D21-206ENST00000508854 TRAK1Q9UPV9 953 aa14.71□□□□□ -0.05
SH3D21-206ENST00000508854 ABCA3Q99758 1704 aa14.71□□□□□ -0.05
SH3D21-206ENST00000508854 FAM98CQ17RN3 349 aaKnown RBP14.7□□□□□ -0.06
SH3D21-206ENST00000508854 NGDNQ8NEJ9 315 aaKnown RBP14.7□□□□□ -0.06
SH3D21-206ENST00000508854 WASLO00401 505 aaPredicted RBP14.69□□□□□ -0.06
SH3D21-206ENST00000508854 COL14A1Q05707 1796 aaKnown RBP14.69□□□□□ -0.06
SH3D21-206ENST00000508854 MINK1Q8N4C8 1332 aaPredicted RBP14.68□□□□□ -0.06
SH3D21-206ENST00000508854 PAK3O75914 559 aaPredicted RBP14.68□□□□□ -0.06
SH3D21-206ENST00000508854 HIRIP3Q9BW71 556 aaPredicted RBP14.68□□□□□ -0.06
SH3D21-206ENST00000508854 TULP4Q9NRJ4 1543 aa14.67□□□□□ -0.06
SH3D21-206ENST00000508854 TRPM3Q9HCF6 1732 aaPredicted RBP14.67□□□□□ -0.06
SH3D21-206ENST00000508854 DCAF11Q8TEB1 546 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms