RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 NUTM2AQ8IVF1 878 aaPredicted RBP20.04■□□□□ 0.8
CCHCR1-227ENST00000508852 MYOM2P54296 1465 aa20.03■□□□□ 0.8
CCHCR1-227ENST00000508852 SOS2Q07890 1332 aaPredicted RBP20.02■□□□□ 0.8
CCHCR1-227ENST00000508852 STAC3Q96MF2 364 aa20.02■□□□□ 0.8
CCHCR1-227ENST00000508852 PNPLA6Q8IY17 1366 aa20.02■□□□□ 0.8
CCHCR1-227ENST00000508852 NPHP3Q7Z494 1330 aa20.02■□□□□ 0.79
CCHCR1-227ENST00000508852 C14orf93Q9H972 538 aaKnown RBP20.01■□□□□ 0.79
CCHCR1-227ENST00000508852 STK26Q9P289 416 aa20.01■□□□□ 0.79
CCHCR1-227ENST00000508852 YTHDC2Q9H6S0 1430 aaKnown RBP20.01■□□□□ 0.79
CCHCR1-227ENST00000508852 NRXN1Q9ULB1 1477 aa20■□□□□ 0.79
CCHCR1-227ENST00000508852 DHX57Q6P158 1386 aaKnown RBP20■□□□□ 0.79
CCHCR1-227ENST00000508852 RXRBP28702 533 aa20■□□□□ 0.79
CCHCR1-227ENST00000508852 ORAI2Q96SN7 254 aa20■□□□□ 0.79
CCHCR1-227ENST00000508852 ESCO1Q5FWF5 840 aa19.99■□□□□ 0.79
CCHCR1-227ENST00000508852 CDK12Q9NYV4 1490 aaPredicted RBP19.98■□□□□ 0.79
CCHCR1-227ENST00000508852 TMEM132EQ6IEE7 984 aa19.97■□□□□ 0.79
CCHCR1-227ENST00000508852 DDX17Q92841 729 aaKnown RBP19.97■□□□□ 0.79
CCHCR1-227ENST00000508852 AFF2P51816 1311 aa19.97■□□□□ 0.79
CCHCR1-227ENST00000508852 WAPLQ7Z5K2 1190 aa19.96■□□□□ 0.79
CCHCR1-227ENST00000508852 COL22A1Q8NFW1 1626 aaPredicted RBP19.95■□□□□ 0.78
CCHCR1-227ENST00000508852 KIF1AQ12756 1690 aa19.95■□□□□ 0.78
CCHCR1-227ENST00000508852 C8orf37Q96NL8 207 aa19.94■□□□□ 0.78
CCHCR1-227ENST00000508852 FMN2Q9NZ56 1722 aa19.93■□□□□ 0.78
CCHCR1-227ENST00000508852 NGLY1Q96IV0 654 aa19.93■□□□□ 0.78
CCHCR1-227ENST00000508852 DLC1Q96QB1 1528 aa19.92■□□□□ 0.78
CCHCR1-227ENST00000508852 CFAP70Q5T0N1 1121 aa19.91■□□□□ 0.78
CCHCR1-227ENST00000508852 FOXO3O43524 673 aa19.9■□□□□ 0.78
CCHCR1-227ENST00000508852 RBM6P78332 1123 aaKnown RBP19.9■□□□□ 0.78
CCHCR1-227ENST00000508852 QTRT2Q9H974 415 aaKnown RBP19.9■□□□□ 0.78
CCHCR1-227ENST00000508852 PXDNQ92626 1479 aa19.9■□□□□ 0.78
CCHCR1-227ENST00000508852 ADAMTS2O95450 1211 aa19.89■□□□□ 0.77
CCHCR1-227ENST00000508852 PLEKHH1Q9ULM0 1364 aa19.89■□□□□ 0.77
CCHCR1-227ENST00000508852 POGKQ9P215 609 aa19.88■□□□□ 0.77
CCHCR1-227ENST00000508852 PSME1Q06323 249 aa19.87■□□□□ 0.77
CCHCR1-227ENST00000508852 EIF3AQ14152 1382 aaKnown RBP19.86■□□□□ 0.77
CCHCR1-227ENST00000508852 MARF1Q9Y4F3 1742 aaKnown RBP19.86■□□□□ 0.77
CCHCR1-227ENST00000508852 FNBP4Q8N3X1 1017 aaPredicted RBP19.86■□□□□ 0.77
CCHCR1-227ENST00000508852 DCAF11Q8TEB1 546 aa19.86■□□□□ 0.77
CCHCR1-227ENST00000508852 PRAM1Q96QH2 718 aa19.86■□□□□ 0.77
CCHCR1-227ENST00000508852 NUTM2FA1L443 756 aa19.85■□□□□ 0.77
CCHCR1-227ENST00000508852 USP21Q9UK80 565 aa19.85■□□□□ 0.77
CCHCR1-227ENST00000508852 TRPC5Q9UL62 973 aaPredicted RBP19.85■□□□□ 0.77
CCHCR1-227ENST00000508852 ANKARQ7Z5J8 1434 aa19.84■□□□□ 0.77
CCHCR1-227ENST00000508852 ADGRB2O60241 1585 aa19.83■□□□□ 0.77
CCHCR1-227ENST00000508852 PHF8Q9UPP1 1060 aa19.83■□□□□ 0.77
CCHCR1-227ENST00000508852 ADGRB1O14514 1584 aa19.83■□□□□ 0.76
CCHCR1-227ENST00000508852 SPATA31A3Q5VYP0 1347 aa19.82■□□□□ 0.76
CCHCR1-227ENST00000508852 KRT28Q7Z3Y7 464 aa19.82■□□□□ 0.76
CCHCR1-227ENST00000508852 KDM2AQ9Y2K7 1162 aa19.82■□□□□ 0.76
CCHCR1-227ENST00000508852 RGPD8O14715 1765 aaPredicted RBP19.82■□□□□ 0.76
CCHCR1-227ENST00000508852 UPF1Q92900 1129 aaKnown RBP eCLIP19.81■□□□□ 0.76
CCHCR1-227ENST00000508852 XPCQ01831 940 aaPredicted RBP19.79■□□□□ 0.76
CCHCR1-227ENST00000508852 SBNO1A3KN83 1393 aa19.79■□□□□ 0.76
CCHCR1-227ENST00000508852 SAFB2Q14151 953 aaKnown RBP eCLIP19.78■□□□□ 0.76
CCHCR1-227ENST00000508852 TRAK1Q9UPV9 953 aa19.78■□□□□ 0.76
CCHCR1-227ENST00000508852 ARHGEF10O15013 1369 aa19.78■□□□□ 0.76
CCHCR1-227ENST00000508852 RGS12O14924 1447 aa19.77■□□□□ 0.76
CCHCR1-227ENST00000508852 TNS3Q68CZ2 1445 aa19.77■□□□□ 0.76
CCHCR1-227ENST00000508852 ATRNO75882 1429 aa19.76■□□□□ 0.75
CCHCR1-227ENST00000508852 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.76■□□□□ 0.75
CCHCR1-227ENST00000508852 KIAA1210Q9ULL0 1709 aa19.76■□□□□ 0.75
CCHCR1-227ENST00000508852 HAP1P54257 671 aaPredicted RBP19.75■□□□□ 0.75
CCHCR1-227ENST00000508852 ATAD2Q6PL18 1390 aa19.74■□□□□ 0.75
CCHCR1-227ENST00000508852 GPRASP1Q5JY77 1395 aa19.73■□□□□ 0.75
CCHCR1-227ENST00000508852 TULP4Q9NRJ4 1543 aa19.73■□□□□ 0.75
CCHCR1-227ENST00000508852 WASLO00401 505 aaPredicted RBP19.73■□□□□ 0.75
CCHCR1-227ENST00000508852 BCL9LQ86UU0 1499 aa19.73■□□□□ 0.75
CCHCR1-227ENST00000508852 USP32Q8NFA0 1604 aa19.73■□□□□ 0.75
CCHCR1-227ENST00000508852 UNC5CLQ8IV45 518 aa19.72■□□□□ 0.75
CCHCR1-227ENST00000508852 ITSN1Q15811 1721 aa19.71■□□□□ 0.75
CCHCR1-227ENST00000508852 ARHGEF28Q8N1W1 1705 aaKnown RBP19.71■□□□□ 0.75
CCHCR1-227ENST00000508852 MINK1Q8N4C8 1332 aaPredicted RBP19.71■□□□□ 0.75
CCHCR1-227ENST00000508852 GJD4Q96KN9 370 aaPredicted RBP19.7■□□□□ 0.74
CCHCR1-227ENST00000508852 SLIT2O94813 1529 aa19.7■□□□□ 0.74
CCHCR1-227ENST00000508852 NWD2Q9ULI1 1742 aa19.69■□□□□ 0.74
CCHCR1-227ENST00000508852 LMOD2Q6P5Q4 547 aa19.69■□□□□ 0.74
CCHCR1-227ENST00000508852 PMFBP1Q8TBY8 1022 aa19.69■□□□□ 0.74
CCHCR1-227ENST00000508852 HIRIP3Q9BW71 556 aaPredicted RBP19.69■□□□□ 0.74
CCHCR1-227ENST00000508852 CCDC125Q86Z20 511 aa19.67■□□□□ 0.74
CCHCR1-227ENST00000508852 NGDNQ8NEJ9 315 aaKnown RBP19.67■□□□□ 0.74
CCHCR1-227ENST00000508852 ABCA3Q99758 1704 aa19.65■□□□□ 0.74
CCHCR1-227ENST00000508852 TRPM3Q9HCF6 1732 aaPredicted RBP19.65■□□□□ 0.74
CCHCR1-227ENST00000508852 ALS2Q96Q42 1657 aa19.64■□□□□ 0.73
CCHCR1-227ENST00000508852 VPS72Q15906 364 aa19.63■□□□□ 0.73
CCHCR1-227ENST00000508852 PLCH1Q4KWH8 1693 aa19.62■□□□□ 0.73
CCHCR1-227ENST00000508852 PRR36Q9H6K5 1346 aa19.62■□□□□ 0.73
CCHCR1-227ENST00000508852 NUDT16Q96DE0 195 aaKnown RBP19.62■□□□□ 0.73
CCHCR1-227ENST00000508852 RALGAPBQ86X10 1494 aa19.61■□□□□ 0.73
CCHCR1-227ENST00000508852 CABLES1Q8TDN4 633 aa19.61■□□□□ 0.73
CCHCR1-227ENST00000508852 ATP7BP35670 1465 aa19.6■□□□□ 0.73
CCHCR1-227ENST00000508852 CDK19Q9BWU1 502 aa19.6■□□□□ 0.73
CCHCR1-227ENST00000508852 PAK3O75914 559 aaPredicted RBP19.59■□□□□ 0.73
CCHCR1-227ENST00000508852 CCDC61Q9Y6R9 512 aa19.59■□□□□ 0.73
CCHCR1-227ENST00000508852 COL14A1Q05707 1796 aaKnown RBP19.59■□□□□ 0.73
CCHCR1-227ENST00000508852 GLI3P10071 1580 aa19.58■□□□□ 0.73
CCHCR1-227ENST00000508852 CCDC9Q9Y3X0 531 aaKnown RBP19.57■□□□□ 0.72
CCHCR1-227ENST00000508852 TOPAZ1Q8N9V7 1692 aa19.56■□□□□ 0.72
CCHCR1-227ENST00000508852 PLEKHG3A1L390 1219 aa19.56■□□□□ 0.72
CCHCR1-227ENST00000508852 FAM83GA6ND36 823 aa19.56■□□□□ 0.72
CCHCR1-227ENST00000508852 ONECUT3O60422 494 aaPredicted RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms