RNA–Protein interactions for RNA: ENST00000508838.5

AFP-204, Transcript of alpha fetoprotein, humanhuman

TSL 2

Gene AFP, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-204ENST00000508838 RSPH4AQ5TD94 716 aa8.9□□□□□ -0.98
AFP-204ENST00000508838 RBM33Q96EV2 1170 aaKnown RBP8.9□□□□□ -0.98
AFP-204ENST00000508838 CLTCL1P53675 1640 aa8.89□□□□□ -0.99
AFP-204ENST00000508838 PLEKHG1Q9ULL1 1385 aa8.88□□□□□ -0.99
AFP-204ENST00000508838 ASTLQ6HA08 431 aaPredicted RBP8.88□□□□□ -0.99
AFP-204ENST00000508838 TXNDC2Q86VQ3 553 aa8.88□□□□□ -0.99
AFP-204ENST00000508838 COL22A1Q8NFW1 1626 aaPredicted RBP8.87□□□□□ -0.99
AFP-204ENST00000508838 NEXMIFQ5QGS0 1516 aa8.87□□□□□ -0.99
AFP-204ENST00000508838 IDI1Q13907 227 aa8.87□□□□□ -0.99
AFP-204ENST00000508838 RIMS2Q9UQ26 1411 aa8.87□□□□□ -0.99
AFP-204ENST00000508838 SLC26A8Q96RN1 970 aa8.86□□□□□ -0.99
AFP-204ENST00000508838 RGS12O14924 1447 aa8.86□□□□□ -0.99
AFP-204ENST00000508838 JCADQ9P266 1359 aa8.86□□□□□ -0.99
AFP-204ENST00000508838 ABCA3Q99758 1704 aa8.85□□□□□ -0.99
AFP-204ENST00000508838 CDK12Q9NYV4 1490 aaPredicted RBP8.85□□□□□ -0.99
AFP-204ENST00000508838 TSPY4P0CV99 314 aa8.85□□□□□ -0.99
AFP-204ENST00000508838 TSPY10P0CW01 314 aa8.85□□□□□ -0.99
AFP-204ENST00000508838 KCNA6P17658 529 aa8.85□□□□□ -0.99
AFP-204ENST00000508838 PPLO60437 1756 aa8.85□□□□□ -0.99
AFP-204ENST00000508838 MST1RQ04912 1400 aa8.85□□□□□ -0.99
AFP-204ENST00000508838 IFT172Q9UG01 1749 aa8.85□□□□□ -0.99
AFP-204ENST00000508838 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.83□□□□□ -1
AFP-204ENST00000508838 DCCP43146 1447 aa8.83□□□□□ -1
AFP-204ENST00000508838 ANKRD50Q9ULJ7 1429 aa8.83□□□□□ -1
AFP-204ENST00000508838 BRWD3Q6RI45 1802 aa8.83□□□□□ -1
AFP-204ENST00000508838 ATMINO43313 823 aaPredicted RBP8.83□□□□□ -1
AFP-204ENST00000508838 ST18O60284 1047 aa8.83□□□□□ -1
AFP-204ENST00000508838 RRP7BPQ9NSQ0 103 aa8.83□□□□□ -1
AFP-204ENST00000508838 MSH6P52701 1360 aa8.83□□□□□ -1
AFP-204ENST00000508838 KIF1BO60333 1816 aa8.82□□□□□ -1
AFP-204ENST00000508838 PHF12Q96QT6 1004 aa8.82□□□□□ -1
AFP-204ENST00000508838 ANKRD30AQ9BXX3 1397 aa8.82□□□□□ -1
AFP-204ENST00000508838 NCOA3Q9Y6Q9 1424 aa8.81□□□□□ -1
AFP-204ENST00000508838 PRAG1Q86YV5 1406 aa8.8□□□□□ -1
AFP-204ENST00000508838 SETD5Q9C0A6 1442 aa8.8□□□□□ -1
AFP-204ENST00000508838 LOC105371045A0A1W2PR82 267 aa8.8□□□□□ -1
AFP-204ENST00000508838 PAK3O75914 559 aaPredicted RBP8.8□□□□□ -1
AFP-204ENST00000508838 KNDC1Q76NI1 1749 aa8.8□□□□□ -1
AFP-204ENST00000508838 ADGRL3Q9HAR2 1447 aa8.8□□□□□ -1
AFP-204ENST00000508838 KANK1Q14678 1352 aa8.79□□□□□ -1
AFP-204ENST00000508838 ATXN8OSP0DMR3 200 aa8.79□□□□□ -1
AFP-204ENST00000508838 PIK3R4Q99570 1358 aa8.78□□□□□ -1
AFP-204ENST00000508838 PROSER2Q86WR7 435 aaPredicted RBP8.78□□□□□ -1
AFP-204ENST00000508838 UPF1Q92900 1129 aaKnown RBP eCLIP8.78□□□□□ -1
AFP-204ENST00000508838 EID1Q9Y6B2 187 aa8.78□□□□□ -1
AFP-204ENST00000508838 RGPD8O14715 1765 aaPredicted RBP8.78□□□□□ -1
AFP-204ENST00000508838 PLCH1Q4KWH8 1693 aa8.78□□□□□ -1
AFP-204ENST00000508838 CDC42BPGQ6DT37 1551 aa8.78□□□□□ -1
AFP-204ENST00000508838 CRYBG1Q9Y4K1 1723 aa8.77□□□□□ -1
AFP-204ENST00000508838 PNPLA6Q8IY17 1366 aa8.77□□□□□ -1.01
AFP-204ENST00000508838 SLAIN2Q9P270 581 aa8.77□□□□□ -1.01
AFP-204ENST00000508838 CHIC2Q9UKJ5 165 aa8.77□□□□□ -1.01
AFP-204ENST00000508838 GLI3P10071 1580 aa8.77□□□□□ -1.01
AFP-204ENST00000508838 SPATA31A6Q5VVP1 1343 aa8.77□□□□□ -1.01
AFP-204ENST00000508838 FMN2Q9NZ56 1722 aa8.77□□□□□ -1.01
AFP-204ENST00000508838 METP08581 1390 aa8.76□□□□□ -1.01
AFP-204ENST00000508838 BRINP3Q76B58 766 aa8.76□□□□□ -1.01
AFP-204ENST00000508838 NRAPQ86VF7 1730 aa8.76□□□□□ -1.01
AFP-204ENST00000508838 MYOM2P54296 1465 aa8.76□□□□□ -1.01
AFP-204ENST00000508838 PTCH1Q13635 1447 aa8.75□□□□□ -1.01
AFP-204ENST00000508838 PXDNQ92626 1479 aa8.75□□□□□ -1.01
AFP-204ENST00000508838 LRP5O75197 1615 aa8.74□□□□□ -1.01
AFP-204ENST00000508838 SLC52A1Q9NWF4 448 aa8.74□□□□□ -1.01
AFP-204ENST00000508838 ROCK1Q13464 1354 aa8.73□□□□□ -1.01
AFP-204ENST00000508838 NUTM2DQ5VT03 806 aaPredicted RBP8.73□□□□□ -1.01
AFP-204ENST00000508838 TBX22Q9Y458 520 aa8.73□□□□□ -1.01
AFP-204ENST00000508838 USP32Q8NFA0 1604 aa8.72□□□□□ -1.01
AFP-204ENST00000508838 C1orf167Q5SNV9 1468 aa8.72□□□□□ -1.01
AFP-204ENST00000508838 TNS1Q9HBL0 1735 aaKnown RBP8.72□□□□□ -1.01
AFP-204ENST00000508838 DDX17Q92841 729 aaKnown RBP8.72□□□□□ -1.01
AFP-204ENST00000508838 TRIM52Q96A61 297 aa8.72□□□□□ -1.01
AFP-204ENST00000508838 ATRNO75882 1429 aa8.71□□□□□ -1.01
AFP-204ENST00000508838 AFF2P51816 1311 aa8.71□□□□□ -1.02
AFP-204ENST00000508838 TRPM3Q9HCF6 1732 aaPredicted RBP8.71□□□□□ -1.02
AFP-204ENST00000508838 NWD2Q9ULI1 1742 aa8.71□□□□□ -1.02
AFP-204ENST00000508838 STAG3Q9UJ98 1225 aa8.7□□□□□ -1.02
AFP-204ENST00000508838 ROBO2Q9HCK4 1378 aa8.7□□□□□ -1.02
AFP-204ENST00000508838 KIF1AQ12756 1690 aa8.69□□□□□ -1.02
AFP-204ENST00000508838 C19orf44Q9H6X5 657 aa8.68□□□□□ -1.02
AFP-204ENST00000508838 BCL9LQ86UU0 1499 aa8.68□□□□□ -1.02
AFP-204ENST00000508838 ALS2Q96Q42 1657 aa8.68□□□□□ -1.02
AFP-204ENST00000508838 POTEFA5A3E0 1075 aa8.67□□□□□ -1.02
AFP-204ENST00000508838 CADPS2Q86UW7 1296 aa8.67□□□□□ -1.02
AFP-204ENST00000508838 MS4A3Q96HJ5 214 aa8.67□□□□□ -1.02
AFP-204ENST00000508838 AMOTL2Q9Y2J4 779 aa8.67□□□□□ -1.02
AFP-204ENST00000508838 TECPR2O15040 1411 aa8.66□□□□□ -1.02
AFP-204ENST00000508838 ZNF772Q68DY9 489 aaPredicted RBP8.66□□□□□ -1.02
AFP-204ENST00000508838 THSD7AQ9UPZ6 1657 aa8.65□□□□□ -1.02
AFP-204ENST00000508838 SLIT2O94813 1529 aa8.65□□□□□ -1.02
AFP-204ENST00000508838 NAIPQ13075 1403 aa8.65□□□□□ -1.02
AFP-204ENST00000508838 SOS2Q07890 1332 aaPredicted RBP8.65□□□□□ -1.02
AFP-204ENST00000508838 PPP1R15AO75807 674 aaPredicted RBP8.65□□□□□ -1.02
AFP-204ENST00000508838 ATN1P54259 1190 aaPredicted RBP8.65□□□□□ -1.02
AFP-204ENST00000508838 MKRN4PQ13434 485 aaPredicted RBP8.65□□□□□ -1.02
AFP-204ENST00000508838 TMEM121BQ9BXQ6 578 aaPredicted RBP8.65□□□□□ -1.02
AFP-204ENST00000508838 NUP155O75694 1391 aa8.64□□□□□ -1.03
AFP-204ENST00000508838 RREB1Q92766 1687 aa8.64□□□□□ -1.03
AFP-204ENST00000508838 ADGRB2O60241 1585 aa8.64□□□□□ -1.03
AFP-204ENST00000508838 RGPD1P0DJD0 1748 aa8.63□□□□□ -1.03
AFP-204ENST00000508838 PHRF1Q9P1Y6 1649 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms