RNA–Protein interactions for RNA: ENST00000508503.5

CLDND1-218, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 707 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-218ENST00000508503 LAMC1P11047 1609 aa17.8■□□□□ 0.44
CLDND1-218ENST00000508503 ORAI2Q96SN7 254 aa17.79■□□□□ 0.44
CLDND1-218ENST00000508503 SHPRHQ149N8 1683 aa17.79■□□□□ 0.44
CLDND1-218ENST00000508503 DHX57Q6P158 1386 aaKnown RBP17.79■□□□□ 0.44
CLDND1-218ENST00000508503 DDX17Q92841 729 aaKnown RBP17.77■□□□□ 0.44
CLDND1-218ENST00000508503 CDC42BPGQ6DT37 1551 aa17.77■□□□□ 0.44
CLDND1-218ENST00000508503 PLEKHH1Q9ULM0 1364 aa17.77■□□□□ 0.43
CLDND1-218ENST00000508503 SOS2Q07890 1332 aaPredicted RBP17.76■□□□□ 0.43
CLDND1-218ENST00000508503 DCAF11Q8TEB1 546 aa17.76■□□□□ 0.43
CLDND1-218ENST00000508503 POTEAQ6S8J7 498 aa17.75■□□□□ 0.43
CLDND1-218ENST00000508503 LRP6O75581 1613 aa17.74■□□□□ 0.43
CLDND1-218ENST00000508503 KDM2AQ9Y2K7 1162 aa17.74■□□□□ 0.43
CLDND1-218ENST00000508503 ADGRB1O14514 1584 aa17.74■□□□□ 0.43
CLDND1-218ENST00000508503 DLC1Q96QB1 1528 aa17.72■□□□□ 0.43
CLDND1-218ENST00000508503 PNPLA6Q8IY17 1366 aa17.71■□□□□ 0.43
CLDND1-218ENST00000508503 ESCO1Q5FWF5 840 aa17.71■□□□□ 0.43
CLDND1-218ENST00000508503 PRAM1Q96QH2 718 aa17.7■□□□□ 0.42
CLDND1-218ENST00000508503 FMN2Q9NZ56 1722 aa17.69■□□□□ 0.42
CLDND1-218ENST00000508503 NPHP3Q7Z494 1330 aa17.69■□□□□ 0.42
CLDND1-218ENST00000508503 FOXO3O43524 673 aa17.67■□□□□ 0.42
CLDND1-218ENST00000508503 TRAK1Q9UPV9 953 aa17.66■□□□□ 0.42
CLDND1-218ENST00000508503 PXDNQ92626 1479 aa17.65■□□□□ 0.42
CLDND1-218ENST00000508503 NUTM2FA1L443 756 aa17.65■□□□□ 0.42
CLDND1-218ENST00000508503 NUTM2BA6NNL0 878 aaPredicted RBP17.65■□□□□ 0.42
CLDND1-218ENST00000508503 NUTM2EB1AL46 878 aaPredicted RBP17.65■□□□□ 0.42
CLDND1-218ENST00000508503 MEX3CQ5U5Q3 659 aaKnown RBP17.65■□□□□ 0.42
CLDND1-218ENST00000508503 ZNF772Q68DY9 489 aaPredicted RBP17.65■□□□□ 0.42
CLDND1-218ENST00000508503 NUTM2AQ8IVF1 878 aaPredicted RBP17.65■□□□□ 0.42
CLDND1-218ENST00000508503 POGKQ9P215 609 aa17.65■□□□□ 0.42
CLDND1-218ENST00000508503 SAFB2Q14151 953 aaKnown RBP eCLIP17.62■□□□□ 0.41
CLDND1-218ENST00000508503 ADGRB2O60241 1585 aa17.62■□□□□ 0.41
CLDND1-218ENST00000508503 COL22A1Q8NFW1 1626 aaPredicted RBP17.61■□□□□ 0.41
CLDND1-218ENST00000508503 KIAA1210Q9ULL0 1709 aa17.61■□□□□ 0.41
CLDND1-218ENST00000508503 RGPD8O14715 1765 aaPredicted RBP17.61■□□□□ 0.41
CLDND1-218ENST00000508503 PHF8Q9UPP1 1060 aa17.61■□□□□ 0.41
CLDND1-218ENST00000508503 ANKARQ7Z5J8 1434 aa17.6■□□□□ 0.41
CLDND1-218ENST00000508503 KIF1AQ12756 1690 aa17.6■□□□□ 0.41
CLDND1-218ENST00000508503 AFF2P51816 1311 aa17.59■□□□□ 0.41
CLDND1-218ENST00000508503 SPATA31A3Q5VYP0 1347 aa17.59■□□□□ 0.41
CLDND1-218ENST00000508503 KRT28Q7Z3Y7 464 aa17.59■□□□□ 0.41
CLDND1-218ENST00000508503 WASLO00401 505 aaPredicted RBP17.58■□□□□ 0.4
CLDND1-218ENST00000508503 XPCQ01831 940 aaPredicted RBP17.58■□□□□ 0.4
CLDND1-218ENST00000508503 NBPF1Q3BBV0 1214 aa17.58■□□□□ 0.4
CLDND1-218ENST00000508503 L3MBTL2Q969R5 705 aa17.58■□□□□ 0.4
CLDND1-218ENST00000508503 SIN3AQ96ST3 1273 aa17.58■□□□□ 0.4
CLDND1-218ENST00000508503 USP32Q8NFA0 1604 aa17.58■□□□□ 0.4
CLDND1-218ENST00000508503 MINK1Q8N4C8 1332 aaPredicted RBP17.57■□□□□ 0.4
CLDND1-218ENST00000508503 FNBP4Q8N3X1 1017 aaPredicted RBP17.57■□□□□ 0.4
CLDND1-218ENST00000508503 C8orf37Q96NL8 207 aa17.56■□□□□ 0.4
CLDND1-218ENST00000508503 HIRIP3Q9BW71 556 aaPredicted RBP17.56■□□□□ 0.4
CLDND1-218ENST00000508503 ARHGEF28Q8N1W1 1705 aaKnown RBP17.55■□□□□ 0.4
CLDND1-218ENST00000508503 PRR36Q9H6K5 1346 aa17.55■□□□□ 0.4
CLDND1-218ENST00000508503 ADAMTS2O95450 1211 aa17.55■□□□□ 0.4
CLDND1-218ENST00000508503 PSME1Q06323 249 aa17.55■□□□□ 0.4
CLDND1-218ENST00000508503 NGLY1Q96IV0 654 aa17.55■□□□□ 0.4
CLDND1-218ENST00000508503 SBNO1A3KN83 1393 aa17.54■□□□□ 0.4
CLDND1-218ENST00000508503 EIF3AQ14152 1382 aaKnown RBP17.54■□□□□ 0.4
CLDND1-218ENST00000508503 RXRBP28702 533 aa17.54■□□□□ 0.4
CLDND1-218ENST00000508503 QTRT2Q9H974 415 aaKnown RBP17.54■□□□□ 0.4
CLDND1-218ENST00000508503 TRIM26Q12899 539 aaPredicted RBP17.53■□□□□ 0.4
CLDND1-218ENST00000508503 TULP4Q9NRJ4 1543 aa17.52■□□□□ 0.4
CLDND1-218ENST00000508503 CDK12Q9NYV4 1490 aaPredicted RBP17.52■□□□□ 0.4
CLDND1-218ENST00000508503 PMFBP1Q8TBY8 1022 aa17.52■□□□□ 0.4
CLDND1-218ENST00000508503 RBM6P78332 1123 aaKnown RBP17.5■□□□□ 0.39
CLDND1-218ENST00000508503 TNS3Q68CZ2 1445 aa17.49■□□□□ 0.39
CLDND1-218ENST00000508503 NEUROD1Q13562 356 aa17.49■□□□□ 0.39
CLDND1-218ENST00000508503 NUDT16Q96DE0 195 aaKnown RBP17.49■□□□□ 0.39
CLDND1-218ENST00000508503 CDK19Q9BWU1 502 aa17.49■□□□□ 0.39
CLDND1-218ENST00000508503 USP21Q9UK80 565 aa17.49■□□□□ 0.39
CLDND1-218ENST00000508503 MARF1Q9Y4F3 1742 aaKnown RBP17.49■□□□□ 0.39
CLDND1-218ENST00000508503 ARHGEF10O15013 1369 aa17.47■□□□□ 0.39
CLDND1-218ENST00000508503 ATP7BP35670 1465 aa17.47■□□□□ 0.39
CLDND1-218ENST00000508503 BCL9LQ86UU0 1499 aa17.47■□□□□ 0.39
CLDND1-218ENST00000508503 PLEKHG3A1L390 1219 aa17.46■□□□□ 0.39
CLDND1-218ENST00000508503 TRPC5Q9UL62 973 aaPredicted RBP17.46■□□□□ 0.39
CLDND1-218ENST00000508503 CCDC61Q9Y6R9 512 aa17.46■□□□□ 0.39
CLDND1-218ENST00000508503 TRPM3Q9HCF6 1732 aaPredicted RBP17.46■□□□□ 0.39
CLDND1-218ENST00000508503 GPRASP1Q5JY77 1395 aa17.45■□□□□ 0.38
CLDND1-218ENST00000508503 ATRNO75882 1429 aa17.45■□□□□ 0.38
CLDND1-218ENST00000508503 CENPJQ9HC77 1338 aaPredicted RBP17.45■□□□□ 0.38
CLDND1-218ENST00000508503 TRPM1Q7Z4N2 1603 aa17.44■□□□□ 0.38
CLDND1-218ENST00000508503 NGDNQ8NEJ9 315 aaKnown RBP17.44■□□□□ 0.38
CLDND1-218ENST00000508503 CABLES1Q8TDN4 633 aa17.44■□□□□ 0.38
CLDND1-218ENST00000508503 SLIT2O94813 1529 aa17.43■□□□□ 0.38
CLDND1-218ENST00000508503 ALS2Q96Q42 1657 aa17.43■□□□□ 0.38
CLDND1-218ENST00000508503 NBPF8Q3BBV2 869 aa17.43■□□□□ 0.38
CLDND1-218ENST00000508503 POLR3AO14802 1390 aaPredicted RBP17.42■□□□□ 0.38
CLDND1-218ENST00000508503 ITSN1Q15811 1721 aa17.42■□□□□ 0.38
CLDND1-218ENST00000508503 UNC5CLQ8IV45 518 aa17.41■□□□□ 0.38
CLDND1-218ENST00000508503 UPF1Q92900 1129 aaKnown RBP eCLIP17.41■□□□□ 0.38
CLDND1-218ENST00000508503 RGS12O14924 1447 aa17.4■□□□□ 0.38
CLDND1-218ENST00000508503 LMOD2Q6P5Q4 547 aa17.4■□□□□ 0.38
CLDND1-218ENST00000508503 ACEP12821 1306 aa17.4■□□□□ 0.38
CLDND1-218ENST00000508503 TOPAZ1Q8N9V7 1692 aa17.39■□□□□ 0.37
CLDND1-218ENST00000508503 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.39■□□□□ 0.37
CLDND1-218ENST00000508503 GJD4Q96KN9 370 aaPredicted RBP17.39■□□□□ 0.37
CLDND1-218ENST00000508503 FAM83GA6ND36 823 aa17.38■□□□□ 0.37
CLDND1-218ENST00000508503 ROCK2O75116 1388 aaKnown RBP17.38■□□□□ 0.37
CLDND1-218ENST00000508503 ABCA3Q99758 1704 aa17.38■□□□□ 0.37
CLDND1-218ENST00000508503 CABP2Q9NPB3 220 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms