RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 MEX3CQ5U5Q3 659 aaKnown RBP24.01■■□□□ 1.43
LMNA-222ENST00000508500 WAPLQ7Z5K2 1190 aa24.01■■□□□ 1.43
LMNA-222ENST00000508500 ABCC11Q96J66 1382 aa24.01■■□□□ 1.43
LMNA-222ENST00000508500 PLEKHH1Q9ULM0 1364 aa24.01■■□□□ 1.43
LMNA-222ENST00000508500 MYOM2P54296 1465 aa24■■□□□ 1.43
LMNA-222ENST00000508500 UPF1Q92900 1129 aaKnown RBP eCLIP23.99■■□□□ 1.43
LMNA-222ENST00000508500 LRRC59Q96AG4 307 aaKnown RBP23.99■■□□□ 1.43
LMNA-222ENST00000508500 C14orf93Q9H972 538 aaKnown RBP23.98■■□□□ 1.43
LMNA-222ENST00000508500 YTHDC2Q9H6S0 1430 aaKnown RBP23.98■■□□□ 1.43
LMNA-222ENST00000508500 RGPD8O14715 1765 aaPredicted RBP23.98■■□□□ 1.43
LMNA-222ENST00000508500 AFF2P51816 1311 aa23.97■■□□□ 1.43
LMNA-222ENST00000508500 FMN2Q9NZ56 1722 aa23.96■■□□□ 1.43
LMNA-222ENST00000508500 COL22A1Q8NFW1 1626 aaPredicted RBP23.96■■□□□ 1.43
LMNA-222ENST00000508500 NUTM2BA6NNL0 878 aaPredicted RBP23.96■■□□□ 1.43
LMNA-222ENST00000508500 NUTM2EB1AL46 878 aaPredicted RBP23.96■■□□□ 1.43
LMNA-222ENST00000508500 CFAP70Q5T0N1 1121 aa23.96■■□□□ 1.43
LMNA-222ENST00000508500 NUTM2AQ8IVF1 878 aaPredicted RBP23.96■■□□□ 1.43
LMNA-222ENST00000508500 SOS2Q07890 1332 aaPredicted RBP23.95■■□□□ 1.42
LMNA-222ENST00000508500 HRCP23327 699 aa23.95■■□□□ 1.42
LMNA-222ENST00000508500 RXRBP28702 533 aa23.94■■□□□ 1.42
LMNA-222ENST00000508500 RGS12O14924 1447 aa23.92■■□□□ 1.42
LMNA-222ENST00000508500 NUTM2FA1L443 756 aa23.89■■□□□ 1.41
LMNA-222ENST00000508500 SIRT1Q96EB6 747 aa23.89■■□□□ 1.41
LMNA-222ENST00000508500 ADGRB1O14514 1584 aa23.89■■□□□ 1.41
LMNA-222ENST00000508500 PXDNQ92626 1479 aa23.88■■□□□ 1.41
LMNA-222ENST00000508500 MARF1Q9Y4F3 1742 aaKnown RBP23.88■■□□□ 1.41
LMNA-222ENST00000508500 ESCO1Q5FWF5 840 aa23.88■■□□□ 1.41
LMNA-222ENST00000508500 DHX57Q6P158 1386 aaKnown RBP23.87■■□□□ 1.41
LMNA-222ENST00000508500 C8orf37Q96NL8 207 aa23.85■■□□□ 1.41
LMNA-222ENST00000508500 DLC1Q96QB1 1528 aa23.84■■□□□ 1.41
LMNA-222ENST00000508500 FOXO3O43524 673 aa23.83■■□□□ 1.41
LMNA-222ENST00000508500 DCAF11Q8TEB1 546 aa23.83■■□□□ 1.41
LMNA-222ENST00000508500 QTRT2Q9H974 415 aaKnown RBP23.83■■□□□ 1.41
LMNA-222ENST00000508500 KDM2AQ9Y2K7 1162 aa23.83■■□□□ 1.41
LMNA-222ENST00000508500 KIF1AQ12756 1690 aa23.83■■□□□ 1.4
LMNA-222ENST00000508500 RBM6P78332 1123 aaKnown RBP23.82■■□□□ 1.4
LMNA-222ENST00000508500 XPCQ01831 940 aaPredicted RBP23.82■■□□□ 1.4
LMNA-222ENST00000508500 NPHP3Q7Z494 1330 aa23.82■■□□□ 1.4
LMNA-222ENST00000508500 USP32Q8NFA0 1604 aa23.81■■□□□ 1.4
LMNA-222ENST00000508500 PRAM1Q96QH2 718 aa23.81■■□□□ 1.4
LMNA-222ENST00000508500 ADAMTS2O95450 1211 aa23.79■■□□□ 1.4
LMNA-222ENST00000508500 SAFB2Q14151 953 aaKnown RBP eCLIP23.79■■□□□ 1.4
LMNA-222ENST00000508500 FNBP4Q8N3X1 1017 aaPredicted RBP23.78■■□□□ 1.4
LMNA-222ENST00000508500 ADGRB2O60241 1585 aa23.78■■□□□ 1.4
LMNA-222ENST00000508500 ATRNO75882 1429 aa23.77■■□□□ 1.4
LMNA-222ENST00000508500 ARHGEF28Q8N1W1 1705 aaKnown RBP23.76■■□□□ 1.39
LMNA-222ENST00000508500 NGLY1Q96IV0 654 aa23.76■■□□□ 1.39
LMNA-222ENST00000508500 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.76■■□□□ 1.39
LMNA-222ENST00000508500 TRAK1Q9UPV9 953 aa23.75■■□□□ 1.39
LMNA-222ENST00000508500 BCL9LQ86UU0 1499 aa23.75■■□□□ 1.39
LMNA-222ENST00000508500 EP400Q96L91 3159 aa23.73■■□□□ 1.39
LMNA-222ENST00000508500 STAC3Q96MF2 364 aa23.72■■□□□ 1.39
LMNA-222ENST00000508500 POGKQ9P215 609 aa23.72■■□□□ 1.39
LMNA-222ENST00000508500 SPATA31A3Q5VYP0 1347 aa23.71■■□□□ 1.39
LMNA-222ENST00000508500 USP21Q9UK80 565 aa23.71■■□□□ 1.39
LMNA-222ENST00000508500 KIAA1210Q9ULL0 1709 aa23.7■■□□□ 1.39
LMNA-222ENST00000508500 KRT28Q7Z3Y7 464 aa23.7■■□□□ 1.38
LMNA-222ENST00000508500 PHF8Q9UPP1 1060 aa23.7■■□□□ 1.38
LMNA-222ENST00000508500 TRPC5Q9UL62 973 aaPredicted RBP23.69■■□□□ 1.38
LMNA-222ENST00000508500 HIRIP3Q9BW71 556 aaPredicted RBP23.68■■□□□ 1.38
LMNA-222ENST00000508500 ANKARQ7Z5J8 1434 aa23.67■■□□□ 1.38
LMNA-222ENST00000508500 ABCA3Q99758 1704 aa23.67■■□□□ 1.38
LMNA-222ENST00000508500 MINK1Q8N4C8 1332 aaPredicted RBP23.67■■□□□ 1.38
LMNA-222ENST00000508500 TRPM3Q9HCF6 1732 aaPredicted RBP23.67■■□□□ 1.38
LMNA-222ENST00000508500 PRR36Q9H6K5 1346 aa23.66■■□□□ 1.38
LMNA-222ENST00000508500 PMFBP1Q8TBY8 1022 aa23.65■■□□□ 1.38
LMNA-222ENST00000508500 ATAD2Q6PL18 1390 aa23.65■■□□□ 1.38
LMNA-222ENST00000508500 SLIT2O94813 1529 aa23.64■■□□□ 1.38
LMNA-222ENST00000508500 GLI3P10071 1580 aa23.64■■□□□ 1.37
LMNA-222ENST00000508500 TULP4Q9NRJ4 1543 aa23.64■■□□□ 1.37
LMNA-222ENST00000508500 TNS3Q68CZ2 1445 aa23.63■■□□□ 1.37
LMNA-222ENST00000508500 ALS2Q96Q42 1657 aa23.61■■□□□ 1.37
LMNA-222ENST00000508500 WASLO00401 505 aaPredicted RBP23.61■■□□□ 1.37
LMNA-222ENST00000508500 BRWD3Q6RI45 1802 aa23.61■■□□□ 1.37
LMNA-222ENST00000508500 SBNO1A3KN83 1393 aa23.6■■□□□ 1.37
LMNA-222ENST00000508500 ITSN1Q15811 1721 aa23.59■■□□□ 1.37
LMNA-222ENST00000508500 PSME1Q06323 249 aa23.59■■□□□ 1.37
LMNA-222ENST00000508500 NBPF1Q3BBV0 1214 aa23.59■■□□□ 1.37
LMNA-222ENST00000508500 CABLES1Q8TDN4 633 aa23.59■■□□□ 1.37
LMNA-222ENST00000508500 PLCH1Q4KWH8 1693 aa23.58■■□□□ 1.37
LMNA-222ENST00000508500 SRCAPQ6ZRS2 3230 aa23.58■■□□□ 1.37
LMNA-222ENST00000508500 NWD2Q9ULI1 1742 aa23.58■■□□□ 1.37
LMNA-222ENST00000508500 CRYBG1Q9Y4K1 1723 aa23.57■■□□□ 1.36
LMNA-222ENST00000508500 ATP7BP35670 1465 aa23.56■■□□□ 1.36
LMNA-222ENST00000508500 GJD4Q96KN9 370 aaPredicted RBP23.56■■□□□ 1.36
LMNA-222ENST00000508500 RALGAPBQ86X10 1494 aa23.56■■□□□ 1.36
LMNA-222ENST00000508500 TOPAZ1Q8N9V7 1692 aa23.55■■□□□ 1.36
LMNA-222ENST00000508500 EIF3AQ14152 1382 aaKnown RBP23.54■■□□□ 1.36
LMNA-222ENST00000508500 SIN3AQ96ST3 1273 aa23.54■■□□□ 1.36
LMNA-222ENST00000508500 PLEKHG5O94827 1062 aa23.53■■□□□ 1.36
LMNA-222ENST00000508500 UNC5CLQ8IV45 518 aa23.52■■□□□ 1.36
LMNA-222ENST00000508500 L3MBTL2Q969R5 705 aa23.52■■□□□ 1.36
LMNA-222ENST00000508500 ARHGEF10O15013 1369 aa23.52■■□□□ 1.36
LMNA-222ENST00000508500 LMOD2Q6P5Q4 547 aa23.51■■□□□ 1.35
LMNA-222ENST00000508500 NUDT16Q96DE0 195 aaKnown RBP23.5■■□□□ 1.35
LMNA-222ENST00000508500 CDK19Q9BWU1 502 aa23.5■■□□□ 1.35
LMNA-222ENST00000508500 TRPM1Q7Z4N2 1603 aa23.5■■□□□ 1.35
LMNA-222ENST00000508500 NRAPQ86VF7 1730 aa23.5■■□□□ 1.35
LMNA-222ENST00000508500 QRICH2Q9H0J4 1663 aa23.48■■□□□ 1.35
LMNA-222ENST00000508500 CCDC125Q86Z20 511 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms