RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 ORAI2Q96SN7 254 aa21.04■□□□□ 0.96
RAB28-205ENST00000508274 ABCC11Q96J66 1382 aa21.03■□□□□ 0.96
RAB28-205ENST00000508274 CFAP70Q5T0N1 1121 aa21.02■□□□□ 0.96
RAB28-205ENST00000508274 HRCP23327 699 aa21.02■□□□□ 0.95
RAB28-205ENST00000508274 C14orf93Q9H972 538 aaKnown RBP21.02■□□□□ 0.95
RAB28-205ENST00000508274 NUTM2BA6NNL0 878 aaPredicted RBP21■□□□□ 0.95
RAB28-205ENST00000508274 NUTM2EB1AL46 878 aaPredicted RBP21■□□□□ 0.95
RAB28-205ENST00000508274 MEX3CQ5U5Q3 659 aaKnown RBP21■□□□□ 0.95
RAB28-205ENST00000508274 NUTM2AQ8IVF1 878 aaPredicted RBP21■□□□□ 0.95
RAB28-205ENST00000508274 LRRC59Q96AG4 307 aaKnown RBP20.99■□□□□ 0.95
RAB28-205ENST00000508274 PNPLA6Q8IY17 1366 aa20.99■□□□□ 0.95
RAB28-205ENST00000508274 FMN2Q9NZ56 1722 aa20.98■□□□□ 0.95
RAB28-205ENST00000508274 NUTM2FA1L443 756 aa20.97■□□□□ 0.95
RAB28-205ENST00000508274 SOS2Q07890 1332 aaPredicted RBP20.95■□□□□ 0.95
RAB28-205ENST00000508274 ADGRB1O14514 1584 aa20.95■□□□□ 0.94
RAB28-205ENST00000508274 DHX57Q6P158 1386 aaKnown RBP20.95■□□□□ 0.94
RAB28-205ENST00000508274 ESCO1Q5FWF5 840 aa20.95■□□□□ 0.94
RAB28-205ENST00000508274 KDM2AQ9Y2K7 1162 aa20.95■□□□□ 0.94
RAB28-205ENST00000508274 DCAF11Q8TEB1 546 aa20.94■□□□□ 0.94
RAB28-205ENST00000508274 RGPD8O14715 1765 aaPredicted RBP20.93■□□□□ 0.94
RAB28-205ENST00000508274 SAFB2Q14151 953 aaKnown RBP eCLIP20.91■□□□□ 0.942e-6■■■□□ 16.4
RAB28-205ENST00000508274 SIRT1Q96EB6 747 aa20.91■□□□□ 0.94
RAB28-205ENST00000508274 PXDNQ92626 1479 aa20.91■□□□□ 0.94
RAB28-205ENST00000508274 DLC1Q96QB1 1528 aa20.91■□□□□ 0.94
RAB28-205ENST00000508274 PRAM1Q96QH2 718 aa20.9■□□□□ 0.94
RAB28-205ENST00000508274 XPCQ01831 940 aaPredicted RBP20.89■□□□□ 0.94
RAB28-205ENST00000508274 NPHP3Q7Z494 1330 aa20.89■□□□□ 0.94
RAB28-205ENST00000508274 FOXO3O43524 673 aa20.89■□□□□ 0.93
RAB28-205ENST00000508274 AFF2P51816 1311 aa20.88■□□□□ 0.93
RAB28-205ENST00000508274 COL22A1Q8NFW1 1626 aaPredicted RBP20.88■□□□□ 0.93
RAB28-205ENST00000508274 ZNF772Q68DY9 489 aaPredicted RBP20.88■□□□□ 0.93
RAB28-205ENST00000508274 KIF1AQ12756 1690 aa20.88■□□□□ 0.93
RAB28-205ENST00000508274 C8orf37Q96NL8 207 aa20.86■□□□□ 0.93
RAB28-205ENST00000508274 TRAK1Q9UPV9 953 aa20.86■□□□□ 0.93
RAB28-205ENST00000508274 ADAMTS2O95450 1211 aa20.85■□□□□ 0.93
RAB28-205ENST00000508274 ADGRB2O60241 1585 aa20.85■□□□□ 0.93
RAB28-205ENST00000508274 USP32Q8NFA0 1604 aa20.85■□□□□ 0.93
RAB28-205ENST00000508274 POGKQ9P215 609 aa20.84■□□□□ 0.93
RAB28-205ENST00000508274 ARHGEF28Q8N1W1 1705 aaKnown RBP20.83■□□□□ 0.92
RAB28-205ENST00000508274 STAC3Q96MF2 364 aa20.81■□□□□ 0.92
RAB28-205ENST00000508274 HIRIP3Q9BW71 556 aaPredicted RBP20.8■□□□□ 0.92
RAB28-205ENST00000508274 MARF1Q9Y4F3 1742 aaKnown RBP20.8■□□□□ 0.92
RAB28-205ENST00000508274 MINK1Q8N4C8 1332 aaPredicted RBP20.79■□□□□ 0.92
RAB28-205ENST00000508274 ADRA2BP18089 450 aa20.79■□□□□ 0.92
RAB28-205ENST00000508274 PHF8Q9UPP1 1060 aa20.79■□□□□ 0.92
RAB28-205ENST00000508274 RXRBP28702 533 aa20.78■□□□□ 0.92
RAB28-205ENST00000508274 NGLY1Q96IV0 654 aa20.78■□□□□ 0.92
RAB28-205ENST00000508274 KIAA1210Q9ULL0 1709 aa20.77■□□□□ 0.92
RAB28-205ENST00000508274 ANKARQ7Z5J8 1434 aa20.77■□□□□ 0.91
RAB28-205ENST00000508274 KRT28Q7Z3Y7 464 aa20.76■□□□□ 0.91
RAB28-205ENST00000508274 SPATA31A3Q5VYP0 1347 aa20.76■□□□□ 0.91
RAB28-205ENST00000508274 QTRT2Q9H974 415 aaKnown RBP20.75■□□□□ 0.91
RAB28-205ENST00000508274 TULP4Q9NRJ4 1543 aa20.74■□□□□ 0.91
RAB28-205ENST00000508274 CDK12Q9NYV4 1490 aaPredicted RBP20.74■□□□□ 0.91
RAB28-205ENST00000508274 PMFBP1Q8TBY8 1022 aa20.74■□□□□ 0.91
RAB28-205ENST00000508274 PRR36Q9H6K5 1346 aa20.74■□□□□ 0.91
RAB28-205ENST00000508274 TNS3Q68CZ2 1445 aa20.73■□□□□ 0.91
RAB28-205ENST00000508274 USP21Q9UK80 565 aa20.72■□□□□ 0.91
RAB28-205ENST00000508274 RGS12O14924 1447 aa20.72■□□□□ 0.91
RAB28-205ENST00000508274 ABCA3Q99758 1704 aa20.71■□□□□ 0.91
RAB28-205ENST00000508274 TRPM3Q9HCF6 1732 aaPredicted RBP20.71■□□□□ 0.91
RAB28-205ENST00000508274 WASLO00401 505 aaPredicted RBP20.71■□□□□ 0.91
RAB28-205ENST00000508274 NBPF1Q3BBV0 1214 aa20.71■□□□□ 0.91
RAB28-205ENST00000508274 FNBP4Q8N3X1 1017 aaPredicted RBP20.71■□□□□ 0.91
RAB28-205ENST00000508274 RBM6P78332 1123 aaKnown RBP20.7■□□□□ 0.9
RAB28-205ENST00000508274 SIN3AQ96ST3 1273 aa20.7■□□□□ 0.9
RAB28-205ENST00000508274 SBNO1A3KN83 1393 aa20.69■□□□□ 0.9
RAB28-205ENST00000508274 EIF3AQ14152 1382 aaKnown RBP20.69■□□□□ 0.9
RAB28-205ENST00000508274 PLEKHG5O94827 1062 aa20.68■□□□□ 0.9
RAB28-205ENST00000508274 PSME1Q06323 249 aa20.68■□□□□ 0.9
RAB28-205ENST00000508274 ATP7BP35670 1465 aa20.68■□□□□ 0.9
RAB28-205ENST00000508274 BCL9LQ86UU0 1499 aa20.68■□□□□ 0.9
RAB28-205ENST00000508274 ITSN1Q15811 1721 aa20.67■□□□□ 0.9
RAB28-205ENST00000508274 ATRNO75882 1429 aa20.67■□□□□ 0.9
RAB28-205ENST00000508274 CABLES1Q8TDN4 633 aa20.67■□□□□ 0.9
RAB28-205ENST00000508274 ALS2Q96Q42 1657 aa20.66■□□□□ 0.9
RAB28-205ENST00000508274 LMOD2Q6P5Q4 547 aa20.66■□□□□ 0.9
RAB28-205ENST00000508274 L3MBTL2Q969R5 705 aa20.66■□□□□ 0.9
RAB28-205ENST00000508274 TRPC5Q9UL62 973 aaPredicted RBP20.66■□□□□ 0.9
RAB28-205ENST00000508274 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.65■□□□□ 0.9
RAB28-205ENST00000508274 UPF1Q92900 1129 aaKnown RBP eCLIP20.64■□□□□ 0.9
RAB28-205ENST00000508274 TOPAZ1Q8N9V7 1692 aa20.64■□□□□ 0.89
RAB28-205ENST00000508274 ARHGEF10O15013 1369 aa20.64■□□□□ 0.89
RAB28-205ENST00000508274 NEUROD1Q13562 356 aa20.63■□□□□ 0.89
RAB28-205ENST00000508274 SLIT2O94813 1529 aa20.63■□□□□ 0.89
RAB28-205ENST00000508274 PLCH1Q4KWH8 1693 aa20.62■□□□□ 0.89
RAB28-205ENST00000508274 TRPM1Q7Z4N2 1603 aa20.62■□□□□ 0.89
RAB28-205ENST00000508274 NUDT16Q96DE0 195 aaKnown RBP20.62■□□□□ 0.89
RAB28-205ENST00000508274 GPRASP1Q5JY77 1395 aa20.61■□□□□ 0.89
RAB28-205ENST00000508274 QRICH2Q9H0J4 1663 aa20.61■□□□□ 0.89
RAB28-205ENST00000508274 HAP1P54257 671 aaPredicted RBP20.61■□□□□ 0.89
RAB28-205ENST00000508274 CDK19Q9BWU1 502 aa20.61■□□□□ 0.89
RAB28-205ENST00000508274 EP400Q96L91 3159 aa20.6■□□□□ 0.89
RAB28-205ENST00000508274 NGDNQ8NEJ9 315 aaKnown RBP20.6■□□□□ 0.89
RAB28-205ENST00000508274 CRYBG1Q9Y4K1 1723 aa20.6■□□□□ 0.89
RAB28-205ENST00000508274 PIAS4Q8N2W9 510 aaPredicted RBP20.58■□□□□ 0.88
RAB28-205ENST00000508274 GLI3P10071 1580 aa20.58■□□□□ 0.88
RAB28-205ENST00000508274 NWD2Q9ULI1 1742 aa20.58■□□□□ 0.88
RAB28-205ENST00000508274 CENPJQ9HC77 1338 aaPredicted RBP20.57■□□□□ 0.88
RAB28-205ENST00000508274 UNC5CLQ8IV45 518 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms