RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 CDK19Q9BWU1 502 aa15.09■□□□□ 0.01
PROM1-207ENST00000508167 ROBO2Q9HCK4 1378 aa15.09■□□□□ 0.01
PROM1-207ENST00000508167 PLEKHH1Q9ULM0 1364 aa15.09■□□□□ 0.01
PROM1-207ENST00000508167 SETBP1Q9Y6X0 1596 aa15.09■□□□□ 0.01
PROM1-207ENST00000508167 MED14O60244 1454 aa15.07■□□□□ 0
PROM1-207ENST00000508167 PTPRUQ92729 1446 aa15.06■□□□□ 0
PROM1-207ENST00000508167 WASLO00401 505 aaPredicted RBP15.05■□□□□ 0
PROM1-207ENST00000508167 PRKRIP1Q9H875 184 aaPredicted RBP15.05■□□□□ 0
PROM1-207ENST00000508167 TMEM94Q12767 1356 aa15.05■□□□□ -0
PROM1-207ENST00000508167 SIRT1Q96EB6 747 aa15.05■□□□□ -0
PROM1-207ENST00000508167 TESK2Q96S53 571 aa15.05■□□□□ -0
PROM1-207ENST00000508167 C19orf44Q9H6X5 657 aa15.04■□□□□ -0
PROM1-207ENST00000508167 ANP32CO43423 234 aa15.04■□□□□ -0
PROM1-207ENST00000508167 NGDNQ8NEJ9 315 aaKnown RBP15.04■□□□□ -0
PROM1-207ENST00000508167 ADGRB1O14514 1584 aa15.03■□□□□ -0
PROM1-207ENST00000508167 PLEKHG5O94827 1062 aa15.03■□□□□ -0
PROM1-207ENST00000508167 MSH6P52701 1360 aa15.03■□□□□ -0
PROM1-207ENST00000508167 ESCO1Q5FWF5 840 aa15.03■□□□□ -0
PROM1-207ENST00000508167 DIP2AQ14689 1571 aa15.03■□□□□ -0
PROM1-207ENST00000508167 PMFBP1Q8TBY8 1022 aa15.02□□□□□ -0.01
PROM1-207ENST00000508167 NUDT16Q96DE0 195 aaKnown RBP15.02□□□□□ -0.01
PROM1-207ENST00000508167 ASXL1Q8IXJ9 1541 aa15.02□□□□□ -0.01
PROM1-207ENST00000508167 DISP3Q9P2K9 1392 aa15.02□□□□□ -0.01
PROM1-207ENST00000508167 CADPS2Q86UW7 1296 aa15.01□□□□□ -0.01
PROM1-207ENST00000508167 LMOD2Q6P5Q4 547 aa15.01□□□□□ -0.01
PROM1-207ENST00000508167 FAM135BQ49AJ0 1406 aa15.01□□□□□ -0.01
PROM1-207ENST00000508167 NRXN3Q9Y4C0 1643 aa15.01□□□□□ -0.01
PROM1-207ENST00000508167 HDGFL2Q7Z4V5 671 aaPredicted RBP15.01□□□□□ -0.01
PROM1-207ENST00000508167 SLC12A5Q9H2X9 1139 aa15.01□□□□□ -0.01
PROM1-207ENST00000508167 CABP1Q9NZU7 370 aa15□□□□□ -0.01
PROM1-207ENST00000508167 SUPT16HQ9Y5B9 1047 aaKnown RBP15□□□□□ -0.01
PROM1-207ENST00000508167 CCDC61Q9Y6R9 512 aa15□□□□□ -0.01
PROM1-207ENST00000508167 TERF2IPQ9NYB0 399 aa14.99□□□□□ -0.01
PROM1-207ENST00000508167 PAK3O75914 559 aaPredicted RBP14.99□□□□□ -0.01
PROM1-207ENST00000508167 KNSTRNQ9Y448 316 aa14.99□□□□□ -0.01
PROM1-207ENST00000508167 PIP4K2BP78356 416 aa14.98□□□□□ -0.01
PROM1-207ENST00000508167 PANK3Q9H999 370 aa14.98□□□□□ -0.01
PROM1-207ENST00000508167 PTCH1Q13635 1447 aa14.97□□□□□ -0.01
PROM1-207ENST00000508167 ATAD2Q6PL18 1390 aa14.97□□□□□ -0.01
PROM1-207ENST00000508167 TECPR2O15040 1411 aa14.96□□□□□ -0.01
PROM1-207ENST00000508167 PSME1Q06323 249 aa14.96□□□□□ -0.01
PROM1-207ENST00000508167 STRCQ7RTU9 1775 aa14.96□□□□□ -0.02
PROM1-207ENST00000508167 UBAP1LF5GYI3 381 aa14.95□□□□□ -0.02
PROM1-207ENST00000508167 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.95□□□□□ -0.02
PROM1-207ENST00000508167 DLC1Q96QB1 1528 aa14.95□□□□□ -0.02
PROM1-207ENST00000508167 SBNO2Q9Y2G9 1366 aa14.94□□□□□ -0.02
PROM1-207ENST00000508167 FOXO3O43524 673 aa14.94□□□□□ -0.02
PROM1-207ENST00000508167 XPCQ01831 940 aaPredicted RBP14.94□□□□□ -0.02
PROM1-207ENST00000508167 PHF8Q9UPP1 1060 aa14.94□□□□□ -0.02
PROM1-207ENST00000508167 TOM1O60784 492 aa14.94□□□□□ -0.02
PROM1-207ENST00000508167 NKTRP30414 1462 aaKnown RBP14.93□□□□□ -0.02
PROM1-207ENST00000508167 PER1O15534 1290 aaPredicted RBP14.93□□□□□ -0.02
PROM1-207ENST00000508167 ORAI2Q96SN7 254 aa14.93□□□□□ -0.02
PROM1-207ENST00000508167 ADGRL3Q9HAR2 1447 aa14.93□□□□□ -0.02
PROM1-207ENST00000508167 CC2D1BQ5T0F9 858 aaKnown RBP14.92□□□□□ -0.02
PROM1-207ENST00000508167 SLAIN2Q9P270 581 aa14.92□□□□□ -0.02
PROM1-207ENST00000508167 PARD3Q8TEW0 1356 aa14.92□□□□□ -0.02
PROM1-207ENST00000508167 CPS1P31327 1500 aa14.91□□□□□ -0.02
PROM1-207ENST00000508167 ARHGEF28Q8N1W1 1705 aaKnown RBP14.91□□□□□ -0.02
PROM1-207ENST00000508167 QRICH2Q9H0J4 1663 aa14.91□□□□□ -0.02
PROM1-207ENST00000508167 SOX12O15370 315 aa14.9□□□□□ -0.02
PROM1-207ENST00000508167 PPIP5K1Q6PFW1 1433 aa14.9□□□□□ -0.02
PROM1-207ENST00000508167 ACEP12821 1306 aa14.9□□□□□ -0.02
PROM1-207ENST00000508167 TNNT2P45379 298 aaPredicted RBP14.89□□□□□ -0.03
PROM1-207ENST00000508167 PRR36Q9H6K5 1346 aa14.89□□□□□ -0.03
PROM1-207ENST00000508167 CHD2O14647 1828 aaKnown RBP14.89□□□□□ -0.03
PROM1-207ENST00000508167 HAP1P54257 671 aaPredicted RBP14.89□□□□□ -0.03
PROM1-207ENST00000508167 SETD1AO15047 1707 aaKnown RBP14.89□□□□□ -0.03
PROM1-207ENST00000508167 CERKQ8TCT0 537 aa14.89□□□□□ -0.03
PROM1-207ENST00000508167 PUS7Q96PZ0 661 aaKnown RBP14.89□□□□□ -0.03
PROM1-207ENST00000508167 ZNF692Q9BU19 519 aaPredicted RBP14.88□□□□□ -0.03
PROM1-207ENST00000508167 KTN1Q86UP2 1357 aaKnown RBP14.88□□□□□ -0.03
PROM1-207ENST00000508167 LRRC7Q96NW7 1537 aa14.88□□□□□ -0.03
PROM1-207ENST00000508167 ZBTB7CA1YPR0 619 aa14.88□□□□□ -0.03
PROM1-207ENST00000508167 NUTM2GQ5VZR2 741 aa14.87□□□□□ -0.03
PROM1-207ENST00000508167 DDX17Q92841 729 aaKnown RBP14.86□□□□□ -0.03
PROM1-207ENST00000508167 XRN1Q8IZH2 1706 aaKnown RBP14.86□□□□□ -0.03
PROM1-207ENST00000508167 CGNL1Q0VF96 1302 aa14.85□□□□□ -0.03
PROM1-207ENST00000508167 TULP4Q9NRJ4 1543 aa14.85□□□□□ -0.03
PROM1-207ENST00000508167 KRT28Q7Z3Y7 464 aa14.85□□□□□ -0.03
PROM1-207ENST00000508167 MORC1Q86VD1 984 aa14.85□□□□□ -0.03
PROM1-207ENST00000508167 ABTB2Q8N961 1025 aa14.85□□□□□ -0.03
PROM1-207ENST00000508167 GGNBP2Q9H3C7 697 aa14.84□□□□□ -0.03
PROM1-207ENST00000508167 NCOA3Q9Y6Q9 1424 aa14.84□□□□□ -0.03
PROM1-207ENST00000508167 NINLQ9Y2I6 1382 aa14.84□□□□□ -0.03
PROM1-207ENST00000508167 PPM1GO15355 546 aaPredicted RBP14.83□□□□□ -0.03
PROM1-207ENST00000508167 KNDC1Q76NI1 1749 aa14.83□□□□□ -0.04
PROM1-207ENST00000508167 NPHP3Q7Z494 1330 aa14.83□□□□□ -0.04
PROM1-207ENST00000508167 PLEKHG3A1L390 1219 aa14.83□□□□□ -0.04
PROM1-207ENST00000508167 NLRP6P59044 892 aa14.83□□□□□ -0.04
PROM1-207ENST00000508167 NWD1Q149M9 1564 aa14.82□□□□□ -0.04
PROM1-207ENST00000508167 NSD3Q9BZ95 1437 aa14.82□□□□□ -0.04
PROM1-207ENST00000508167 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.82□□□□□ -0.04
PROM1-207ENST00000508167 COG3Q96JB2 828 aa14.82□□□□□ -0.04
PROM1-207ENST00000508167 A0A1W2PP64 1363 aa14.82□□□□□ -0.04
PROM1-207ENST00000508167 ANKRD36BQ8N2N9 1353 aa14.82□□□□□ -0.04
PROM1-207ENST00000508167 BRINP3Q76B58 766 aa14.82□□□□□ -0.04
PROM1-207ENST00000508167 PNISRQ8TF01 805 aaKnown RBP14.81□□□□□ -0.04
PROM1-207ENST00000508167 ZBED9Q6R2W3 1325 aa14.81□□□□□ -0.04
PROM1-207ENST00000508167 ANKARQ7Z5J8 1434 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms