RNA–Protein interactions for RNA: ENST00000508086.1

CCSER1-206, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-206ENST00000508086 SNIP1Q8TAD8 396 aaKnown RBP11.36□□□□□ -0.59
CCSER1-206ENST00000508086 NFX1Q12986 1120 aaKnown RBP11.35□□□□□ -0.59
CCSER1-206ENST00000508086 NLRP7Q8WX94 980 aa11.35□□□□□ -0.59
CCSER1-206ENST00000508086 GPR37O15354 613 aa11.34□□□□□ -0.59
CCSER1-206ENST00000508086 GCGRP47871 477 aa11.34□□□□□ -0.59
CCSER1-206ENST00000508086 SENP2Q9HC62 589 aa11.34□□□□□ -0.59
CCSER1-206ENST00000508086 ATP13A2Q9NQ11 1180 aa11.34□□□□□ -0.59
CCSER1-206ENST00000508086 WNT7AO00755 349 aa11.33□□□□□ -0.6
CCSER1-206ENST00000508086 GNPATO15228 680 aa11.33□□□□□ -0.6
CCSER1-206ENST00000508086 BRICD5Q6PL45 260 aa11.33□□□□□ -0.6
CCSER1-206ENST00000508086 SALL2Q9Y467 1007 aaPredicted RBP11.32□□□□□ -0.6
CCSER1-206ENST00000508086 SNRPBP14678 240 aaKnown RBP11.31□□□□□ -0.6
CCSER1-206ENST00000508086 SMPD1P17405 629 aa11.31□□□□□ -0.6
CCSER1-206ENST00000508086 WIPF1O43516 503 aa11.3□□□□□ -0.6
CCSER1-206ENST00000508086 TRIM32Q13049 653 aa11.3□□□□□ -0.6
CCSER1-206ENST00000508086 Q3C1V9 767 aa11.3□□□□□ -0.6
CCSER1-206ENST00000508086 MSS51Q4VC12 460 aa11.3□□□□□ -0.6
CCSER1-206ENST00000508086 RNF19BQ6ZMZ0 732 aa11.3□□□□□ -0.6
CCSER1-206ENST00000508086 MRGPRX2Q96LB1 330 aa11.3□□□□□ -0.6
CCSER1-206ENST00000508086 TERTO14746 1132 aaKnown RBP11.29□□□□□ -0.6
CCSER1-206ENST00000508086 CCDC24Q8N4L8 307 aa11.29□□□□□ -0.6
CCSER1-206ENST00000508086 J3QL48 77 aa11.28□□□□□ -0.6
CCSER1-206ENST00000508086 GPIHBP1Q8IV16 184 aa11.27□□□□□ -0.61
CCSER1-206ENST00000508086 KIFC2Q96AC6 838 aa11.27□□□□□ -0.61
CCSER1-206ENST00000508086 TRIM47Q96LD4 638 aa11.27□□□□□ -0.61
CCSER1-206ENST00000508086 REPIN1Q9BWE0 567 aaKnown RBP11.27□□□□□ -0.61
CCSER1-206ENST00000508086 TULP1O00294 542 aaPredicted RBP11.25□□□□□ -0.61
CCSER1-206ENST00000508086 SLC16A10Q8TF71 515 aa11.25□□□□□ -0.61
CCSER1-206ENST00000508086 FAM181BA6NEQ2 426 aa11.24□□□□□ -0.61
CCSER1-206ENST00000508086 HPS1Q92902 700 aa11.24□□□□□ -0.61
CCSER1-206ENST00000508086 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.22□□□□□ -0.61
CCSER1-206ENST00000508086 USB1Q9BQ65 265 aaKnown RBP11.21□□□□□ -0.61
CCSER1-206ENST00000508086 RC3H1Q5TC82 1133 aaKnown RBP11.2□□□□□ -0.62
CCSER1-206ENST00000508086 ALDH1A1P00352 501 aa11.19□□□□□ -0.62
CCSER1-206ENST00000508086 MMP16P51512 607 aa11.19□□□□□ -0.62
CCSER1-206ENST00000508086 SLC24A1O60721 1099 aa11.17□□□□□ -0.62
CCSER1-206ENST00000508086 PHOX2BQ99453 314 aa11.17□□□□□ -0.62
CCSER1-206ENST00000508086 KDM4AO75164 1064 aa11.15□□□□□ -0.62
CCSER1-206ENST00000508086 DXOO77932 396 aaKnown RBP11.14□□□□□ -0.63
CCSER1-206ENST00000508086 WNT7BP56706 349 aa11.14□□□□□ -0.63
CCSER1-206ENST00000508086 WASF2Q9Y6W5 498 aa11.14□□□□□ -0.63
CCSER1-206ENST00000508086 NXF1Q9UBU9 619 aaKnown RBP11.13□□□□□ -0.63
CCSER1-206ENST00000508086 LCE2CQ5TA81 110 aa11.12□□□□□ -0.63
CCSER1-206ENST00000508086 SKOR1P84550 965 aa11.11□□□□□ -0.63
CCSER1-206ENST00000508086 MAP2K5Q13163 448 aa11.11□□□□□ -0.63
CCSER1-206ENST00000508086 EHBP1Q8NDI1 1231 aa11.11□□□□□ -0.63
CCSER1-206ENST00000508086 IRF7Q92985 503 aa11.11□□□□□ -0.63
CCSER1-206ENST00000508086 CD46P15529 392 aa11.1□□□□□ -0.63
CCSER1-206ENST00000508086 CAPN5O15484 640 aaPredicted RBP11.09□□□□□ -0.63
CCSER1-206ENST00000508086 USP46P62068 366 aa11.09□□□□□ -0.63
CCSER1-206ENST00000508086 ZSCAN1Q8NBB4 408 aa11.09□□□□□ -0.63
CCSER1-206ENST00000508086 BMP1P13497 986 aa11.08□□□□□ -0.64
CCSER1-206ENST00000508086 GMPRP36959 345 aa11.08□□□□□ -0.64
CCSER1-206ENST00000508086 VEGFBP49765 207 aa11.07□□□□□ -0.64
CCSER1-206ENST00000508086 HLA-CQ95604 372 aa11.07□□□□□ -0.64
CCSER1-206ENST00000508086 MINK1Q8N4C8 1332 aaPredicted RBP11.07□□□□□ -0.64
CCSER1-206ENST00000508086 IRF6O14896 467 aa11.06□□□□□ -0.64
CCSER1-206ENST00000508086 JUNDP17535 347 aa11.05□□□□□ -0.64
CCSER1-206ENST00000508086 MDM2Q00987 491 aaPredicted RBP11.04□□□□□ -0.64
CCSER1-206ENST00000508086 ZC3H15Q8WU90 426 aaKnown RBP11.03□□□□□ -0.64
CCSER1-206ENST00000508086 CCDC102AQ96A19 550 aa11.03□□□□□ -0.64
CCSER1-206ENST00000508086 NUDT12Q9BQG2 462 aa11.03□□□□□ -0.64
CCSER1-206ENST00000508086 HOXA2O43364 376 aa11.02□□□□□ -0.65
CCSER1-206ENST00000508086 ZMYND10O75800 440 aa11.02□□□□□ -0.65
CCSER1-206ENST00000508086 GUCA2AQ02747 115 aa11.02□□□□□ -0.65
CCSER1-206ENST00000508086 NPAS3Q8IXF0 933 aa11.02□□□□□ -0.65
CCSER1-206ENST00000508086 SYMPKQ92797 1274 aaKnown RBP11.02□□□□□ -0.65
CCSER1-206ENST00000508086 BARGINQ6ZT62 677 aa11.01□□□□□ -0.65
CCSER1-206ENST00000508086 TRIM46Q7Z4K8 759 aa11.01□□□□□ -0.65
CCSER1-206ENST00000508086 NUTM1Q86Y26 1132 aa11.01□□□□□ -0.65
CCSER1-206ENST00000508086 KRI1Q8N9T8 703 aaKnown RBP11□□□□□ -0.65
CCSER1-206ENST00000508086 PTCRAQ6ISU1 281 aaPredicted RBP10.98□□□□□ -0.65
CCSER1-206ENST00000508086 H3BM21 787 aa10.97□□□□□ -0.65
CCSER1-206ENST00000508086 C6orf229H3BNL8 230 aa10.97□□□□□ -0.65
CCSER1-206ENST00000508086 SIAH2O43255 324 aa10.97□□□□□ -0.65
CCSER1-206ENST00000508086 RETREG3Q86VR2 466 aa10.97□□□□□ -0.65
CCSER1-206ENST00000508086 SCARF1Q14162 830 aa10.96□□□□□ -0.65
CCSER1-206ENST00000508086 ZFP42Q96MM3 310 aa10.96□□□□□ -0.65
CCSER1-206ENST00000508086 MS4A1P11836 297 aa10.95□□□□□ -0.66
CCSER1-206ENST00000508086 PLEKHG3A1L390 1219 aa10.94□□□□□ -0.66
CCSER1-206ENST00000508086 SH3BP2P78314 561 aa10.94□□□□□ -0.66
CCSER1-206ENST00000508086 BCANQ96GW7 911 aa10.94□□□□□ -0.66
CCSER1-206ENST00000508086 CCNYL3P0C7X3 344 aa10.93□□□□□ -0.66
CCSER1-206ENST00000508086 LINC01559Q495D7 138 aa10.93□□□□□ -0.66
CCSER1-206ENST00000508086 ERBB4Q15303 1308 aa10.92□□□□□ -0.66
CCSER1-206ENST00000508086 FDX1P10109 184 aa10.91□□□□□ -0.66
CCSER1-206ENST00000508086 CLCN1P35523 988 aa10.91□□□□□ -0.66
CCSER1-206ENST00000508086 GPCPD1Q9NPB8 672 aa10.91□□□□□ -0.66
CCSER1-206ENST00000508086 TLL2Q9Y6L7 1015 aa10.91□□□□□ -0.66
CCSER1-206ENST00000508086 PURBQ96QR8 312 aaKnown RBP10.9□□□□□ -0.66
CCSER1-206ENST00000508086 NNTQ13423 1086 aa10.89□□□□□ -0.67
CCSER1-206ENST00000508086 MRPL14Q6P1L8 145 aaKnown RBP10.89□□□□□ -0.67
CCSER1-206ENST00000508086 BAP1Q92560 729 aa10.89□□□□□ -0.67
CCSER1-206ENST00000508086 UNC93B1Q9H1C4 597 aa10.89□□□□□ -0.67
CCSER1-206ENST00000508086 LORP23490 312 aaPredicted RBP10.88□□□□□ -0.67
CCSER1-206ENST00000508086 AMHR2Q16671 573 aa10.87□□□□□ -0.67
CCSER1-206ENST00000508086 VARSP26640 1264 aaKnown RBP10.86□□□□□ -0.67
CCSER1-206ENST00000508086 WDR4P57081 412 aaKnown RBP10.86□□□□□ -0.67
CCSER1-206ENST00000508086 FAM217BQ9NTX9 383 aaPredicted RBP10.86□□□□□ -0.67
CCSER1-206ENST00000508086 SOBPA7XYQ1 873 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms