RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 FAM50AQ14320 339 aaKnown RBP10.23□□□□□ -0.77
CLCN3-206ENST00000507875 HIC1Q14526 733 aa10.23□□□□□ -0.77
CLCN3-206ENST00000507875 SPDYE16A6NNV3 312 aaPredicted RBP10.23□□□□□ -0.77
CLCN3-206ENST00000507875 HFM1A2PYH4 1435 aa10.22□□□□□ -0.77
CLCN3-206ENST00000507875 SETD5Q9C0A6 1442 aa10.22□□□□□ -0.77
CLCN3-206ENST00000507875 ABCC1P33527 1531 aa10.22□□□□□ -0.77
CLCN3-206ENST00000507875 MDM2Q00987 491 aaPredicted RBP10.22□□□□□ -0.77
CLCN3-206ENST00000507875 GDPD2Q9HCC8 539 aa10.22□□□□□ -0.77
CLCN3-206ENST00000507875 FAM161AQ3B820 660 aa10.21□□□□□ -0.78
CLCN3-206ENST00000507875 CCDC141Q6ZP82 1450 aa10.2□□□□□ -0.78
CLCN3-206ENST00000507875 PLXNC1O60486 1568 aa10.2□□□□□ -0.78
CLCN3-206ENST00000507875 ABCC5O15440 1437 aa10.2□□□□□ -0.78
CLCN3-206ENST00000507875 EFCAB2Q5VUJ9 269 aa10.2□□□□□ -0.78
CLCN3-206ENST00000507875 DPY19L2Q6NUT2 758 aa10.2□□□□□ -0.78
CLCN3-206ENST00000507875 UPF1Q92900 1129 aaKnown RBP eCLIP10.19□□□□□ -0.78
CLCN3-206ENST00000507875 NEO1Q92859 1461 aa10.19□□□□□ -0.78
CLCN3-206ENST00000507875 MBD5Q9P267 1494 aa10.19□□□□□ -0.78
CLCN3-206ENST00000507875 CLSPNQ9HAW4 1339 aa10.19□□□□□ -0.78
CLCN3-206ENST00000507875 PDE4CQ08493 712 aa10.18□□□□□ -0.78
CLCN3-206ENST00000507875 PTGDRQ13258 359 aa10.18□□□□□ -0.78
CLCN3-206ENST00000507875 CCER1Q8TC90 406 aaPredicted RBP10.18□□□□□ -0.78
CLCN3-206ENST00000507875 COL17A1Q9UMD9 1497 aaPredicted RBP10.18□□□□□ -0.78
CLCN3-206ENST00000507875 SKIV2LQ15477 1246 aaKnown RBP10.18□□□□□ -0.78
CLCN3-206ENST00000507875 BEGAINQ9BUH8 593 aa10.18□□□□□ -0.78
CLCN3-206ENST00000507875 FCHSD2O94868 740 aa10.17□□□□□ -0.78
CLCN3-206ENST00000507875 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.17□□□□□ -0.78
CLCN3-206ENST00000507875 TMUB1Q9BVT8 246 aa10.17□□□□□ -0.78
CLCN3-206ENST00000507875 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.17□□□□□ -0.78
CLCN3-206ENST00000507875 FANCAO15360 1455 aa10.17□□□□□ -0.78
CLCN3-206ENST00000507875 SYCP2Q9BX26 1530 aa10.16□□□□□ -0.78
CLCN3-206ENST00000507875 E9PSI1 815 aa10.16□□□□□ -0.78
CLCN3-206ENST00000507875 RFX1P22670 979 aa10.16□□□□□ -0.78
CLCN3-206ENST00000507875 RTEL1-TNFRSF6BF6WH68 1400 aa10.16□□□□□ -0.78
CLCN3-206ENST00000507875 NAIPQ13075 1403 aa10.16□□□□□ -0.78
CLCN3-206ENST00000507875 PTPRKQ15262 1439 aa10.16□□□□□ -0.78
CLCN3-206ENST00000507875 CDHR5Q9HBB8 845 aa10.16□□□□□ -0.78
CLCN3-206ENST00000507875 ANKRD30AQ9BXX3 1397 aa10.16□□□□□ -0.78
CLCN3-206ENST00000507875 SSTR3P32745 418 aaPredicted RBP10.15□□□□□ -0.78
CLCN3-206ENST00000507875 C9orf84Q5VXU9 1444 aa10.15□□□□□ -0.79
CLCN3-206ENST00000507875 RAB3GAP2Q9H2M9 1393 aa10.14□□□□□ -0.79
CLCN3-206ENST00000507875 MTMR14Q8NCE2 650 aa10.14□□□□□ -0.79
CLCN3-206ENST00000507875 GLMNQ92990 594 aa10.14□□□□□ -0.79
CLCN3-206ENST00000507875 INO80Q9ULG1 1556 aaPredicted RBP10.14□□□□□ -0.79
CLCN3-206ENST00000507875 NCOA1Q15788 1441 aa10.14□□□□□ -0.79
CLCN3-206ENST00000507875 KDM4FA0A1W2PPD8 638 aa10.13□□□□□ -0.79
CLCN3-206ENST00000507875 TSPY4P0CV99 314 aa10.13□□□□□ -0.79
CLCN3-206ENST00000507875 TSPY10P0CW01 314 aa10.13□□□□□ -0.79
CLCN3-206ENST00000507875 MYSM1Q5VVJ2 828 aa10.13□□□□□ -0.79
CLCN3-206ENST00000507875 PLPP6Q8IY26 295 aa10.13□□□□□ -0.79
CLCN3-206ENST00000507875 CALR3Q96L12 384 aaKnown RBP10.13□□□□□ -0.79
CLCN3-206ENST00000507875 USP35Q9P2H5 1018 aa10.13□□□□□ -0.79
CLCN3-206ENST00000507875 SPDYE5A6NIY4 337 aa10.13□□□□□ -0.79
CLCN3-206ENST00000507875 TMEM106CQ9BVX2 250 aa10.13□□□□□ -0.79
CLCN3-206ENST00000507875 UNCXA6NJT0 531 aa10.12□□□□□ -0.79
CLCN3-206ENST00000507875 ADGRL1O94910 1474 aa10.12□□□□□ -0.79
CLCN3-206ENST00000507875 ZNF644Q9H582 1327 aaPredicted RBP10.12□□□□□ -0.79
CLCN3-206ENST00000507875 DUOX2Q9NRD8 1548 aa10.12□□□□□ -0.79
CLCN3-206ENST00000507875 KDM5CP41229 1560 aa10.12□□□□□ -0.79
CLCN3-206ENST00000507875 EIF2AK4Q9P2K8 1649 aaKnown RBP10.12□□□□□ -0.79
CLCN3-206ENST00000507875 ZNF518AQ6AHZ1 1483 aa10.11□□□□□ -0.79
CLCN3-206ENST00000507875 RFC5P40937 340 aa10.11□□□□□ -0.79
CLCN3-206ENST00000507875 FOXK1P85037 733 aa10.11□□□□□ -0.79
CLCN3-206ENST00000507875 ARHGEF12Q9NZN5 1544 aa10.11□□□□□ -0.79
CLCN3-206ENST00000507875 ITGAEP38570 1179 aa10.11□□□□□ -0.79
CLCN3-206ENST00000507875 ADAMTS19Q8TE59 1207 aa10.11□□□□□ -0.79
CLCN3-206ENST00000507875 KDM5DQ9BY66 1539 aa10.1□□□□□ -0.79
CLCN3-206ENST00000507875 ABL2P42684 1182 aa10.1□□□□□ -0.79
CLCN3-206ENST00000507875 MAP3K9P80192 1104 aa10.1□□□□□ -0.79
CLCN3-206ENST00000507875 GOLGA2Q08379 1002 aa10.1□□□□□ -0.79
CLCN3-206ENST00000507875 PHF12Q96QT6 1004 aa10.1□□□□□ -0.79
CLCN3-206ENST00000507875 BCORL1Q5H9F3 1711 aa10.1□□□□□ -0.79
CLCN3-206ENST00000507875 RICTORQ6R327 1708 aa10.1□□□□□ -0.79
CLCN3-206ENST00000507875 RAPGEF3O95398 923 aa10.1□□□□□ -0.79
CLCN3-206ENST00000507875 GPCPD1Q9NPB8 672 aa10.1□□□□□ -0.79
CLCN3-206ENST00000507875 UNC13BO14795 1591 aa10.1□□□□□ -0.79
CLCN3-206ENST00000507875 ZFYVE16Q7Z3T8 1539 aa10.1□□□□□ -0.79
CLCN3-206ENST00000507875 TBC1D12O60347 775 aa10.09□□□□□ -0.79
CLCN3-206ENST00000507875 CDK11BP21127 795 aaKnown RBP10.09□□□□□ -0.79
CLCN3-206ENST00000507875 TBC1D2BQ9UPU7 963 aa10.09□□□□□ -0.79
CLCN3-206ENST00000507875 ATP7AQ04656 1500 aa10.09□□□□□ -0.79
CLCN3-206ENST00000507875 DENND4BO75064 1496 aaPredicted RBP10.09□□□□□ -0.79
CLCN3-206ENST00000507875 ERBINQ96RT1 1412 aa10.09□□□□□ -0.79
CLCN3-206ENST00000507875 DHX57Q6P158 1386 aaKnown RBP10.09□□□□□ -0.79
CLCN3-206ENST00000507875 NPDC1Q9NQX5 325 aaPredicted RBP10.09□□□□□ -0.79
CLCN3-206ENST00000507875 HECW2Q9P2P5 1572 aa10.08□□□□□ -0.8
CLCN3-206ENST00000507875 MLH3Q9UHC1 1453 aa10.08□□□□□ -0.8
CLCN3-206ENST00000507875 ZMYM4Q5VZL5 1548 aa10.08□□□□□ -0.8
CLCN3-206ENST00000507875 C2orf72A6NCS6 295 aa10.08□□□□□ -0.8
CLCN3-206ENST00000507875 HNRNPMP52272 730 aaKnown RBP eCLIP10.08□□□□□ -0.8
CLCN3-206ENST00000507875 LIMD1Q9UGP4 676 aa10.08□□□□□ -0.8
CLCN3-206ENST00000507875 IVNS1ABPQ9Y6Y0 642 aa10.08□□□□□ -0.8
CLCN3-206ENST00000507875 KIDINS220Q9ULH0 1771 aa10.08□□□□□ -0.8
CLCN3-206ENST00000507875 POGZQ7Z3K3 1410 aa10.08□□□□□ -0.8
CLCN3-206ENST00000507875 SCAPERQ9BY12 1400 aa10.08□□□□□ -0.8
CLCN3-206ENST00000507875 RBM42Q9BTD8 480 aaKnown RBP10.07□□□□□ -0.8
CLCN3-206ENST00000507875 ANKRD50Q9ULJ7 1429 aa10.06□□□□□ -0.8
CLCN3-206ENST00000507875 TRAPPC8Q9Y2L5 1435 aa10.06□□□□□ -0.8
CLCN3-206ENST00000507875 DEPDC5O75140 1603 aa10.06□□□□□ -0.8
CLCN3-206ENST00000507875 MAGI2Q86UL8 1455 aa10.06□□□□□ -0.8
CLCN3-206ENST00000507875 CLCN1P35523 988 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms