RNA–Protein interactions for RNA: ENST00000507785.2

MSX2-202, Transcript of msh homeobox 2, humanhuman

TSL 2 BASIC

Gene MSX2, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-202ENST00000507785 TRAK1Q9UPV9 953 aa40.3■■■■■ 4.04
MSX2-202ENST00000507785 C1orf167Q5SNV9 1468 aa40.28■■■■■ 4.04
MSX2-202ENST00000507785 BRINP3Q76B58 766 aa40.28■■■■■ 4.04
MSX2-202ENST00000507785 ARHGEF28Q8N1W1 1705 aaKnown RBP40.28■■■■■ 4.04
MSX2-202ENST00000507785 NBPF1Q3BBV0 1214 aa40.27■■■■■ 4.04
MSX2-202ENST00000507785 PHLPP1O60346 1717 aa40.26■■■■■ 4.04
MSX2-202ENST00000507785 AHDC1Q5TGY3 1603 aaPredicted RBP40.25■■■■■ 4.03
MSX2-202ENST00000507785 TRPM1Q7Z4N2 1603 aa40.25■■■■■ 4.03
MSX2-202ENST00000507785 TONSLQ96HA7 1378 aa40.23■■■■■ 4.03
MSX2-202ENST00000507785 FMN2Q9NZ56 1722 aa40.22■■■■■ 4.03
MSX2-202ENST00000507785 POGKQ9P215 609 aa40.21■■■■■ 4.03
MSX2-202ENST00000507785 COL16A1Q07092 1604 aaPredicted RBP40.2■■■■■ 4.03
MSX2-202ENST00000507785 SAFB2Q14151 953 aaKnown RBP eCLIP40.19■■■■■ 4.02
MSX2-202ENST00000507785 ADGRB2O60241 1585 aa40.18■■■■■ 4.02
MSX2-202ENST00000507785 NHSL1Q5SYE7 1610 aa40.18■■■■■ 4.02
MSX2-202ENST00000507785 NBPF8Q3BBV2 869 aa40.15■■■■■ 4.02
MSX2-202ENST00000507785 CLSPNQ9HAW4 1339 aa40.14■■■■■ 4.02
MSX2-202ENST00000507785 ORAI2Q96SN7 254 aa40.13■■■■■ 4.01
MSX2-202ENST00000507785 RGPD8O14715 1765 aaPredicted RBP40.07■■■■■ 4.01
MSX2-202ENST00000507785 MINK1Q8N4C8 1332 aaPredicted RBP40.07■■■■■ 4
MSX2-202ENST00000507785 NUTM2FA1L443 756 aa40.06■■■■■ 4
MSX2-202ENST00000507785 ROCK2O75116 1388 aaKnown RBP40.04■■■■■ 4
MSX2-202ENST00000507785 GPRASP1Q5JY77 1395 aa40.03■■■■■ 4
MSX2-202ENST00000507785 DDX17Q92841 729 aaKnown RBP40.03■■■■■ 4
MSX2-202ENST00000507785 HIRIP3Q9BW71 556 aaPredicted RBP40.03■■■■■ 4
MSX2-202ENST00000507785 ESCO1Q5FWF5 840 aa40.02■■■■■ 4
MSX2-202ENST00000507785 USP32Q8NFA0 1604 aa40.02■■■■■ 4
MSX2-202ENST00000507785 MED1Q15648 1581 aaPredicted RBP40.01■■■■■ 4
MSX2-202ENST00000507785 JCADQ9P266 1359 aa40■■■■□ 3.99
MSX2-202ENST00000507785 RALGAPBQ86X10 1494 aa40■■■■□ 3.99
MSX2-202ENST00000507785 ANKARQ7Z5J8 1434 aa39.98■■■■□ 3.99
MSX2-202ENST00000507785 KIF1AQ12756 1690 aa39.96■■■■□ 3.99
MSX2-202ENST00000507785 SHPRHQ149N8 1683 aa39.96■■■■□ 3.99
MSX2-202ENST00000507785 WASLO00401 505 aaPredicted RBP39.96■■■■□ 3.99
MSX2-202ENST00000507785 QRICH2Q9H0J4 1663 aa39.95■■■■□ 3.99
MSX2-202ENST00000507785 TULP4Q9NRJ4 1543 aa39.95■■■■□ 3.99
MSX2-202ENST00000507785 CENPJQ9HC77 1338 aaPredicted RBP39.94■■■■□ 3.98
MSX2-202ENST00000507785 SOS2Q07890 1332 aaPredicted RBP39.93■■■■□ 3.98
MSX2-202ENST00000507785 CCER1Q8TC90 406 aaPredicted RBP39.93■■■■□ 3.98
MSX2-202ENST00000507785 EIF3AQ14152 1382 aaKnown RBP39.93■■■■□ 3.98
MSX2-202ENST00000507785 TIMELESSQ9UNS1 1208 aa39.9■■■■□ 3.98
MSX2-202ENST00000507785 NPHP3Q7Z494 1330 aa39.9■■■■□ 3.98
MSX2-202ENST00000507785 PRR36Q9H6K5 1346 aa39.9■■■■□ 3.98
MSX2-202ENST00000507785 PXDNQ92626 1479 aa39.88■■■■□ 3.98
MSX2-202ENST00000507785 LRRC59Q96AG4 307 aaKnown RBP39.88■■■■□ 3.97
MSX2-202ENST00000507785 FOXO3O43524 673 aa39.87■■■■□ 3.97
MSX2-202ENST00000507785 DISP3Q9P2K9 1392 aa39.86■■■■□ 3.97
MSX2-202ENST00000507785 PHF8Q9UPP1 1060 aa39.86■■■■□ 3.97
MSX2-202ENST00000507785 ATP7BP35670 1465 aa39.84■■■■□ 3.97
MSX2-202ENST00000507785 CARD11Q9BXL7 1154 aa39.84■■■■□ 3.97
MSX2-202ENST00000507785 CDK19Q9BWU1 502 aa39.83■■■■□ 3.97
MSX2-202ENST00000507785 ITSN1Q15811 1721 aa39.81■■■■□ 3.96
MSX2-202ENST00000507785 SPATA31A6Q5VVP1 1343 aa39.81■■■■□ 3.96
MSX2-202ENST00000507785 PNPLA6Q8IY17 1366 aa39.81■■■■□ 3.96
MSX2-202ENST00000507785 TOPAZ1Q8N9V7 1692 aa39.77■■■■□ 3.96
MSX2-202ENST00000507785 XPCQ01831 940 aaPredicted RBP39.77■■■■□ 3.96
MSX2-202ENST00000507785 NUDT16Q96DE0 195 aaKnown RBP39.77■■■■□ 3.96
MSX2-202ENST00000507785 LRP6O75581 1613 aa39.76■■■■□ 3.96
MSX2-202ENST00000507785 PMFBP1Q8TBY8 1022 aa39.75■■■■□ 3.95
MSX2-202ENST00000507785 COL22A1Q8NFW1 1626 aaPredicted RBP39.72■■■■□ 3.95
MSX2-202ENST00000507785 KRT28Q7Z3Y7 464 aa39.71■■■■□ 3.95
MSX2-202ENST00000507785 SBNO2Q9Y2G9 1366 aa39.7■■■■□ 3.95
MSX2-202ENST00000507785 SRPK2P78362 688 aaKnown RBP39.66■■■■□ 3.94
MSX2-202ENST00000507785 CABP2Q9NPB3 220 aa39.66■■■■□ 3.94
MSX2-202ENST00000507785 CCDC61Q9Y6R9 512 aa39.66■■■■□ 3.94
MSX2-202ENST00000507785 SPATA31A3Q5VYP0 1347 aa39.65■■■■□ 3.94
MSX2-202ENST00000507785 EVC2Q86UK5 1308 aa39.65■■■■□ 3.94
MSX2-202ENST00000507785 TRPM3Q9HCF6 1732 aaPredicted RBP39.65■■■■□ 3.94
MSX2-202ENST00000507785 PSME1Q06323 249 aa39.64■■■■□ 3.94
MSX2-202ENST00000507785 SBNO1A3KN83 1393 aa39.63■■■■□ 3.93
MSX2-202ENST00000507785 PHF23Q9BUL5 403 aaPredicted RBP39.63■■■■□ 3.93
MSX2-202ENST00000507785 NUTM2BA6NNL0 878 aaPredicted RBP39.62■■■■□ 3.93
MSX2-202ENST00000507785 NUTM2EB1AL46 878 aaPredicted RBP39.62■■■■□ 3.93
MSX2-202ENST00000507785 NUTM2AQ8IVF1 878 aaPredicted RBP39.62■■■■□ 3.93
MSX2-202ENST00000507785 PLEKHG3A1L390 1219 aa39.61■■■■□ 3.93
MSX2-202ENST00000507785 TNS3Q68CZ2 1445 aa39.61■■■■□ 3.93
MSX2-202ENST00000507785 NGDNQ8NEJ9 315 aaKnown RBP39.6■■■■□ 3.93
MSX2-202ENST00000507785 POLR3AO14802 1390 aaPredicted RBP39.59■■■■□ 3.93
MSX2-202ENST00000507785 RGS17Q9UGC6 210 aaPredicted RBP39.59■■■■□ 3.93
MSX2-202ENST00000507785 PPIP5K1Q6PFW1 1433 aa39.57■■■■□ 3.93
MSX2-202ENST00000507785 ALS2Q96Q42 1657 aa39.55■■■■□ 3.92
MSX2-202ENST00000507785 ACEP12821 1306 aa39.54■■■■□ 3.92
MSX2-202ENST00000507785 USP47Q96K76 1375 aa39.52■■■■□ 3.92
MSX2-202ENST00000507785 ST20-MTHFSA0A0A6YYL1 179 aa39.52■■■■□ 3.92
MSX2-202ENST00000507785 MEX3CQ5U5Q3 659 aaKnown RBP39.52■■■■□ 3.92
MSX2-202ENST00000507785 TESK2Q96S53 571 aa39.52■■■■□ 3.92
MSX2-202ENST00000507785 ARHGEF10O15013 1369 aa39.49■■■■□ 3.91
MSX2-202ENST00000507785 ILDR2Q71H61 639 aa39.48■■■■□ 3.91
MSX2-202ENST00000507785 CABP1Q9NZU7 370 aa39.47■■■■□ 3.91
MSX2-202ENST00000507785 ATAD2Q6PL18 1390 aa39.46■■■■□ 3.91
MSX2-202ENST00000507785 MARF1Q9Y4F3 1742 aaKnown RBP39.45■■■■□ 3.91
MSX2-202ENST00000507785 ABCA3Q99758 1704 aa39.45■■■■□ 3.91
MSX2-202ENST00000507785 ADAMTS2O95450 1211 aa39.43■■■■□ 3.9
MSX2-202ENST00000507785 LMOD2Q6P5Q4 547 aa39.41■■■■□ 3.9
MSX2-202ENST00000507785 AKAP12Q02952 1782 aa39.39■■■■□ 3.9
MSX2-202ENST00000507785 PAK3O75914 559 aaPredicted RBP39.38■■■■□ 3.89
MSX2-202ENST00000507785 POTEAQ6S8J7 498 aa39.38■■■■□ 3.89
MSX2-202ENST00000507785 C8orf37Q96NL8 207 aa39.38■■■■□ 3.89
MSX2-202ENST00000507785 PUS7Q96PZ0 661 aaKnown RBP39.38■■■■□ 3.89
MSX2-202ENST00000507785 CRYBG1Q9Y4K1 1723 aa39.37■■■■□ 3.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms