RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 ABCC11Q96J66 1382 aa23.86■■□□□ 1.41
HOXC4-203ENST00000507650 WAPLQ7Z5K2 1190 aa23.85■■□□□ 1.41
HOXC4-203ENST00000507650 ORAI2Q96SN7 254 aa23.85■■□□□ 1.41
HOXC4-203ENST00000507650 STK26Q9P289 416 aa23.85■■□□□ 1.41
HOXC4-203ENST00000507650 ADGRB1O14514 1584 aa23.83■■□□□ 1.41
HOXC4-203ENST00000507650 C14orf93Q9H972 538 aaKnown RBP23.83■■□□□ 1.41
HOXC4-203ENST00000507650 PNPLA6Q8IY17 1366 aa23.82■■□□□ 1.4
HOXC4-203ENST00000507650 CFAP70Q5T0N1 1121 aa23.81■■□□□ 1.4
HOXC4-203ENST00000507650 HRCP23327 699 aa23.8■■□□□ 1.4
HOXC4-203ENST00000507650 COL22A1Q8NFW1 1626 aaPredicted RBP23.79■■□□□ 1.4
HOXC4-203ENST00000507650 PXDNQ92626 1479 aa23.78■■□□□ 1.4
HOXC4-203ENST00000507650 SOS2Q07890 1332 aaPredicted RBP23.78■■□□□ 1.4
HOXC4-203ENST00000507650 USP32Q8NFA0 1604 aa23.76■■□□□ 1.39
HOXC4-203ENST00000507650 DHX57Q6P158 1386 aaKnown RBP23.76■■□□□ 1.39
HOXC4-203ENST00000507650 NUTM2BA6NNL0 878 aaPredicted RBP23.75■■□□□ 1.39
HOXC4-203ENST00000507650 NUTM2EB1AL46 878 aaPredicted RBP23.75■■□□□ 1.39
HOXC4-203ENST00000507650 NUTM2AQ8IVF1 878 aaPredicted RBP23.75■■□□□ 1.39
HOXC4-203ENST00000507650 DLC1Q96QB1 1528 aa23.74■■□□□ 1.39
HOXC4-203ENST00000507650 LRRC59Q96AG4 307 aaKnown RBP23.74■■□□□ 1.39
HOXC4-203ENST00000507650 KIF1AQ12756 1690 aa23.73■■□□□ 1.39
HOXC4-203ENST00000507650 MARF1Q9Y4F3 1742 aaKnown RBP23.73■■□□□ 1.39
HOXC4-203ENST00000507650 ADGRB2O60241 1585 aa23.72■■□□□ 1.39
HOXC4-203ENST00000507650 ARHGEF28Q8N1W1 1705 aaKnown RBP23.72■■□□□ 1.39
HOXC4-203ENST00000507650 NUTM2FA1L443 756 aa23.71■■□□□ 1.39
HOXC4-203ENST00000507650 SIRT1Q96EB6 747 aa23.71■■□□□ 1.39
HOXC4-203ENST00000507650 MEX3CQ5U5Q3 659 aaKnown RBP23.7■■□□□ 1.38
HOXC4-203ENST00000507650 ESCO1Q5FWF5 840 aa23.69■■□□□ 1.38
HOXC4-203ENST00000507650 DCAF11Q8TEB1 546 aa23.67■■□□□ 1.38
HOXC4-203ENST00000507650 AFF2P51816 1311 aa23.66■■□□□ 1.38
HOXC4-203ENST00000507650 XPCQ01831 940 aaPredicted RBP23.66■■□□□ 1.38
HOXC4-203ENST00000507650 PRAM1Q96QH2 718 aa23.66■■□□□ 1.38
HOXC4-203ENST00000507650 KDM2AQ9Y2K7 1162 aa23.66■■□□□ 1.38
HOXC4-203ENST00000507650 FOXO3O43524 673 aa23.64■■□□□ 1.37
HOXC4-203ENST00000507650 SAFB2Q14151 953 aaKnown RBP eCLIP23.64■■□□□ 1.37
HOXC4-203ENST00000507650 KIAA1210Q9ULL0 1709 aa23.64■■□□□ 1.37
HOXC4-203ENST00000507650 NPHP3Q7Z494 1330 aa23.63■■□□□ 1.37
HOXC4-203ENST00000507650 ABCA3Q99758 1704 aa23.63■■□□□ 1.37
HOXC4-203ENST00000507650 ZNF772Q68DY9 489 aaPredicted RBP23.62■■□□□ 1.37
HOXC4-203ENST00000507650 TRPM3Q9HCF6 1732 aaPredicted RBP23.6■■□□□ 1.37
HOXC4-203ENST00000507650 C8orf37Q96NL8 207 aa23.6■■□□□ 1.37
HOXC4-203ENST00000507650 ADAMTS2O95450 1211 aa23.59■■□□□ 1.37
HOXC4-203ENST00000507650 TRAK1Q9UPV9 953 aa23.59■■□□□ 1.37
HOXC4-203ENST00000507650 CDK12Q9NYV4 1490 aaPredicted RBP23.56■■□□□ 1.36
HOXC4-203ENST00000507650 HIRIP3Q9BW71 556 aaPredicted RBP23.55■■□□□ 1.36
HOXC4-203ENST00000507650 ANKARQ7Z5J8 1434 aa23.55■■□□□ 1.36
HOXC4-203ENST00000507650 PRR36Q9H6K5 1346 aa23.55■■□□□ 1.36
HOXC4-203ENST00000507650 TULP4Q9NRJ4 1543 aa23.54■■□□□ 1.36
HOXC4-203ENST00000507650 RGS12O14924 1447 aa23.54■■□□□ 1.36
HOXC4-203ENST00000507650 SPATA31A3Q5VYP0 1347 aa23.54■■□□□ 1.36
HOXC4-203ENST00000507650 ALS2Q96Q42 1657 aa23.54■■□□□ 1.36
HOXC4-203ENST00000507650 STAC3Q96MF2 364 aa23.53■■□□□ 1.36
HOXC4-203ENST00000507650 POGKQ9P215 609 aa23.53■■□□□ 1.36
HOXC4-203ENST00000507650 PHF8Q9UPP1 1060 aa23.53■■□□□ 1.36
HOXC4-203ENST00000507650 MINK1Q8N4C8 1332 aaPredicted RBP23.53■■□□□ 1.36
HOXC4-203ENST00000507650 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.53■■□□□ 1.36
HOXC4-203ENST00000507650 CRYBG1Q9Y4K1 1723 aa23.52■■□□□ 1.36
HOXC4-203ENST00000507650 TOPAZ1Q8N9V7 1692 aa23.51■■□□□ 1.35
HOXC4-203ENST00000507650 ITSN1Q15811 1721 aa23.51■■□□□ 1.35
HOXC4-203ENST00000507650 RXRBP28702 533 aa23.51■■□□□ 1.35
HOXC4-203ENST00000507650 TNS3Q68CZ2 1445 aa23.5■■□□□ 1.35
HOXC4-203ENST00000507650 BCL9LQ86UU0 1499 aa23.5■■□□□ 1.35
HOXC4-203ENST00000507650 KRT28Q7Z3Y7 464 aa23.5■■□□□ 1.35
HOXC4-203ENST00000507650 PLCH1Q4KWH8 1693 aa23.49■■□□□ 1.35
HOXC4-203ENST00000507650 FNBP4Q8N3X1 1017 aaPredicted RBP23.49■■□□□ 1.35
HOXC4-203ENST00000507650 NGLY1Q96IV0 654 aa23.49■■□□□ 1.35
HOXC4-203ENST00000507650 ATRNO75882 1429 aa23.49■■□□□ 1.35
HOXC4-203ENST00000507650 ATP7BP35670 1465 aa23.49■■□□□ 1.35
HOXC4-203ENST00000507650 QTRT2Q9H974 415 aaKnown RBP23.48■■□□□ 1.35
HOXC4-203ENST00000507650 NBPF1Q3BBV0 1214 aa23.47■■□□□ 1.35
HOXC4-203ENST00000507650 TRPM1Q7Z4N2 1603 aa23.47■■□□□ 1.35
HOXC4-203ENST00000507650 SBNO1A3KN83 1393 aa23.46■■□□□ 1.35
HOXC4-203ENST00000507650 PMFBP1Q8TBY8 1022 aa23.46■■□□□ 1.35
HOXC4-203ENST00000507650 WASLO00401 505 aaPredicted RBP23.45■■□□□ 1.34
HOXC4-203ENST00000507650 QRICH2Q9H0J4 1663 aa23.44■■□□□ 1.34
HOXC4-203ENST00000507650 SLIT2O94813 1529 aa23.44■■□□□ 1.34
HOXC4-203ENST00000507650 RBM6P78332 1123 aaKnown RBP23.44■■□□□ 1.34
HOXC4-203ENST00000507650 SIN3AQ96ST3 1273 aa23.44■■□□□ 1.34
HOXC4-203ENST00000507650 USP21Q9UK80 565 aa23.44■■□□□ 1.34
HOXC4-203ENST00000507650 GLI3P10071 1580 aa23.43■■□□□ 1.34
HOXC4-203ENST00000507650 NWD2Q9ULI1 1742 aa23.42■■□□□ 1.34
HOXC4-203ENST00000507650 CABLES1Q8TDN4 633 aa23.42■■□□□ 1.34
HOXC4-203ENST00000507650 UPF1Q92900 1129 aaKnown RBP eCLIP23.42■■□□□ 1.34
HOXC4-203ENST00000507650 NRAPQ86VF7 1730 aa23.41■■□□□ 1.34
HOXC4-203ENST00000507650 L3MBTL2Q969R5 705 aa23.4■■□□□ 1.34
HOXC4-203ENST00000507650 BRWD3Q6RI45 1802 aa23.4■■□□□ 1.34
HOXC4-203ENST00000507650 EP400Q96L91 3159 aa23.4■■□□□ 1.34
HOXC4-203ENST00000507650 EIF3AQ14152 1382 aaKnown RBP23.39■■□□□ 1.33
HOXC4-203ENST00000507650 PSME1Q06323 249 aa23.37■■□□□ 1.33
HOXC4-203ENST00000507650 TRPC5Q9UL62 973 aaPredicted RBP23.37■■□□□ 1.33
HOXC4-203ENST00000507650 ARHGEF10O15013 1369 aa23.36■■□□□ 1.33
HOXC4-203ENST00000507650 PHRF1Q9P1Y6 1649 aaKnown RBP23.36■■□□□ 1.33
HOXC4-203ENST00000507650 PLEKHG5O94827 1062 aa23.35■■□□□ 1.33
HOXC4-203ENST00000507650 NUDT16Q96DE0 195 aaKnown RBP23.34■■□□□ 1.33
HOXC4-203ENST00000507650 RALGAPBQ86X10 1494 aa23.33■■□□□ 1.33
HOXC4-203ENST00000507650 CDK19Q9BWU1 502 aa23.33■■□□□ 1.33
HOXC4-203ENST00000507650 LMOD2Q6P5Q4 547 aa23.31■■□□□ 1.32
HOXC4-203ENST00000507650 COL14A1Q05707 1796 aaKnown RBP23.31■■□□□ 1.32
HOXC4-203ENST00000507650 POLR3AO14802 1390 aaPredicted RBP23.3■■□□□ 1.32
HOXC4-203ENST00000507650 GPRASP1Q5JY77 1395 aa23.3■■□□□ 1.32
HOXC4-203ENST00000507650 UNC5CLQ8IV45 518 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms