RNA–Protein interactions for RNA: ENST00000507226.1

CCHCR1-221, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 544 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-221ENST00000507226 POGKQ9P215 609 aa25.47■■□□□ 1.67
CCHCR1-221ENST00000507226 SCAF1Q9H7N4 1312 aaKnown RBP25.46■■□□□ 1.67
CCHCR1-221ENST00000507226 TRPM1Q7Z4N2 1603 aa25.46■■□□□ 1.67
CCHCR1-221ENST00000507226 SAFB2Q14151 953 aaKnown RBP eCLIP25.46■■□□□ 1.67
CCHCR1-221ENST00000507226 GPRASP1Q5JY77 1395 aa25.45■■□□□ 1.67
CCHCR1-221ENST00000507226 SLAIN2Q9P270 581 aa25.45■■□□□ 1.66
CCHCR1-221ENST00000507226 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.44■■□□□ 1.66
CCHCR1-221ENST00000507226 NALCNQ8IZF0 1738 aa25.43■■□□□ 1.66
CCHCR1-221ENST00000507226 RALGAPBQ86X10 1494 aa25.43■■□□□ 1.66
CCHCR1-221ENST00000507226 MST1RQ04912 1400 aa25.4■■□□□ 1.66
CCHCR1-221ENST00000507226 CARD11Q9BXL7 1154 aa25.38■■□□□ 1.65
CCHCR1-221ENST00000507226 MINK1Q8N4C8 1332 aaPredicted RBP25.37■■□□□ 1.65
CCHCR1-221ENST00000507226 CDC42BPGQ6DT37 1551 aa25.37■■□□□ 1.65
CCHCR1-221ENST00000507226 HIRIP3Q9BW71 556 aaPredicted RBP25.36■■□□□ 1.65
CCHCR1-221ENST00000507226 CENPJQ9HC77 1338 aaPredicted RBP25.35■■□□□ 1.65
CCHCR1-221ENST00000507226 ARHGEF28Q8N1W1 1705 aaKnown RBP25.34■■□□□ 1.65
CCHCR1-221ENST00000507226 C1orf167Q5SNV9 1468 aa25.34■■□□□ 1.65
CCHCR1-221ENST00000507226 BRINP3Q76B58 766 aa25.32■■□□□ 1.64
CCHCR1-221ENST00000507226 HSPA1LP34931 641 aa25.31■■□□□ 1.64
CCHCR1-221ENST00000507226 NUTM2FA1L443 756 aa25.3■■□□□ 1.64
CCHCR1-221ENST00000507226 ADGRB2O60241 1585 aa25.3■■□□□ 1.64
CCHCR1-221ENST00000507226 EIF3AQ14152 1382 aaKnown RBP25.3■■□□□ 1.64
CCHCR1-221ENST00000507226 WASLO00401 505 aaPredicted RBP25.29■■□□□ 1.64
CCHCR1-221ENST00000507226 ORAI2Q96SN7 254 aa25.28■■□□□ 1.64
CCHCR1-221ENST00000507226 ROBO1Q9Y6N7 1651 aa25.28■■□□□ 1.64
CCHCR1-221ENST00000507226 ESCO1Q5FWF5 840 aa25.24■■□□□ 1.63
CCHCR1-221ENST00000507226 FMN2Q9NZ56 1722 aa25.23■■□□□ 1.63
CCHCR1-221ENST00000507226 CDK19Q9BWU1 502 aa25.23■■□□□ 1.63
CCHCR1-221ENST00000507226 ANKARQ7Z5J8 1434 aa25.22■■□□□ 1.63
CCHCR1-221ENST00000507226 PRR36Q9H6K5 1346 aa25.22■■□□□ 1.63
CCHCR1-221ENST00000507226 TULP4Q9NRJ4 1543 aa25.2■■□□□ 1.62
CCHCR1-221ENST00000507226 DDX17Q92841 729 aaKnown RBP25.19■■□□□ 1.62
CCHCR1-221ENST00000507226 USP47Q96K76 1375 aa25.18■■□□□ 1.62
CCHCR1-221ENST00000507226 SBNO2Q9Y2G9 1366 aa25.18■■□□□ 1.62
CCHCR1-221ENST00000507226 ST20-MTHFSA0A0A6YYL1 179 aa25.18■■□□□ 1.62
CCHCR1-221ENST00000507226 QRICH2Q9H0J4 1663 aa25.17■■□□□ 1.62
CCHCR1-221ENST00000507226 AHDC1Q5TGY3 1603 aaPredicted RBP25.17■■□□□ 1.62
CCHCR1-221ENST00000507226 NUDT16Q96DE0 195 aaKnown RBP25.17■■□□□ 1.62
CCHCR1-221ENST00000507226 EVC2Q86UK5 1308 aa25.16■■□□□ 1.62
CCHCR1-221ENST00000507226 PHF8Q9UPP1 1060 aa25.16■■□□□ 1.62
CCHCR1-221ENST00000507226 ATP7BP35670 1465 aa25.15■■□□□ 1.62
CCHCR1-221ENST00000507226 SRPK2P78362 688 aaKnown RBP25.15■■□□□ 1.62
CCHCR1-221ENST00000507226 CABP2Q9NPB3 220 aa25.15■■□□□ 1.62
CCHCR1-221ENST00000507226 USP32Q8NFA0 1604 aa25.15■■□□□ 1.62
CCHCR1-221ENST00000507226 FOXO3O43524 673 aa25.14■■□□□ 1.62
CCHCR1-221ENST00000507226 TESK2Q96S53 571 aa25.14■■□□□ 1.62
CCHCR1-221ENST00000507226 PMFBP1Q8TBY8 1022 aa25.12■■□□□ 1.61
CCHCR1-221ENST00000507226 NPHP3Q7Z494 1330 aa25.12■■□□□ 1.61
CCHCR1-221ENST00000507226 CCDC61Q9Y6R9 512 aa25.11■■□□□ 1.61
CCHCR1-221ENST00000507226 SOS2Q07890 1332 aaPredicted RBP25.11■■□□□ 1.61
CCHCR1-221ENST00000507226 COL16A1Q07092 1604 aaPredicted RBP25.09■■□□□ 1.61
CCHCR1-221ENST00000507226 NHSL1Q5SYE7 1610 aa25.09■■□□□ 1.61
CCHCR1-221ENST00000507226 PHLPP1O60346 1717 aa25.09■■□□□ 1.61
CCHCR1-221ENST00000507226 XPCQ01831 940 aaPredicted RBP25.08■■□□□ 1.61
CCHCR1-221ENST00000507226 PLEKHG3A1L390 1219 aa25.06■■□□□ 1.6
CCHCR1-221ENST00000507226 EIF4G2P78344 907 aaKnown RBP eCLIP25.06■■□□□ 1.6
CCHCR1-221ENST00000507226 LRRC59Q96AG4 307 aaKnown RBP25.06■■□□□ 1.6
CCHCR1-221ENST00000507226 PXDNQ92626 1479 aa25.06■■□□□ 1.6
CCHCR1-221ENST00000507226 KIF1AQ12756 1690 aa25.06■■□□□ 1.6
CCHCR1-221ENST00000507226 KRT28Q7Z3Y7 464 aa25.05■■□□□ 1.6
CCHCR1-221ENST00000507226 JCADQ9P266 1359 aa25.05■■□□□ 1.6
CCHCR1-221ENST00000507226 SLC24A1O60721 1099 aa25.04■■□□□ 1.6
CCHCR1-221ENST00000507226 HSPA5P11021 654 aaKnown RBP25.04■■□□□ 1.6
CCHCR1-221ENST00000507226 NGDNQ8NEJ9 315 aaKnown RBP25.04■■□□□ 1.6
CCHCR1-221ENST00000507226 PPIP5K1Q6PFW1 1433 aa25.03■■□□□ 1.6
CCHCR1-221ENST00000507226 ATAD2Q6PL18 1390 aa25.03■■□□□ 1.6
CCHCR1-221ENST00000507226 PSME1Q06323 249 aa25.02■■□□□ 1.6
CCHCR1-221ENST00000507226 CABP1Q9NZU7 370 aa25.02■■□□□ 1.6
CCHCR1-221ENST00000507226 RGPD8O14715 1765 aaPredicted RBP25.01■■□□□ 1.59
CCHCR1-221ENST00000507226 TMF1P82094 1093 aa25.01■■□□□ 1.59
CCHCR1-221ENST00000507226 PUS7Q96PZ0 661 aaKnown RBP25.01■■□□□ 1.59
CCHCR1-221ENST00000507226 ACEP12821 1306 aa25.01■■□□□ 1.59
CCHCR1-221ENST00000507226 POLR3AO14802 1390 aaPredicted RBP25.01■■□□□ 1.59
CCHCR1-221ENST00000507226 DISP3Q9P2K9 1392 aa25.01■■□□□ 1.59
CCHCR1-221ENST00000507226 TOPAZ1Q8N9V7 1692 aa25■■□□□ 1.59
CCHCR1-221ENST00000507226 PNPLA6Q8IY17 1366 aa24.99■■□□□ 1.59
CCHCR1-221ENST00000507226 SBNO1A3KN83 1393 aa24.97■■□□□ 1.59
CCHCR1-221ENST00000507226 SPATA31A3Q5VYP0 1347 aa24.97■■□□□ 1.59
CCHCR1-221ENST00000507226 ITSN1Q15811 1721 aa24.95■■□□□ 1.59
CCHCR1-221ENST00000507226 SPATA31A6Q5VVP1 1343 aa24.93■■□□□ 1.58
CCHCR1-221ENST00000507226 TNS3Q68CZ2 1445 aa24.93■■□□□ 1.58
CCHCR1-221ENST00000507226 CDCA8Q53HL2 280 aa24.92■■□□□ 1.58
CCHCR1-221ENST00000507226 TMC1Q8TDI8 760 aa24.92■■□□□ 1.58
CCHCR1-221ENST00000507226 SLC12A5Q9H2X9 1139 aa24.91■■□□□ 1.58
CCHCR1-221ENST00000507226 SHPRHQ149N8 1683 aa24.9■■□□□ 1.58
CCHCR1-221ENST00000507226 PAK3O75914 559 aaPredicted RBP24.89■■□□□ 1.58
CCHCR1-221ENST00000507226 USP6P35125 1406 aa24.88■■□□□ 1.57
CCHCR1-221ENST00000507226 CPSF1Q10570 1443 aaKnown RBP24.88■■□□□ 1.57
CCHCR1-221ENST00000507226 NUTM2BA6NNL0 878 aaPredicted RBP24.88■■□□□ 1.57
CCHCR1-221ENST00000507226 NUTM2EB1AL46 878 aaPredicted RBP24.88■■□□□ 1.57
CCHCR1-221ENST00000507226 LMOD2Q6P5Q4 547 aa24.88■■□□□ 1.57
CCHCR1-221ENST00000507226 NUTM2AQ8IVF1 878 aaPredicted RBP24.88■■□□□ 1.57
CCHCR1-221ENST00000507226 ARHGEF10O15013 1369 aa24.88■■□□□ 1.57
CCHCR1-221ENST00000507226 ZNF692Q9BU19 519 aaPredicted RBP24.87■■□□□ 1.57
CCHCR1-221ENST00000507226 NINLQ9Y2I6 1382 aa24.87■■□□□ 1.57
CCHCR1-221ENST00000507226 LRP6O75581 1613 aa24.86■■□□□ 1.57
CCHCR1-221ENST00000507226 TRPM3Q9HCF6 1732 aaPredicted RBP24.86■■□□□ 1.57
CCHCR1-221ENST00000507226 CD163L1Q9NR16 1453 aa24.86■■□□□ 1.57
CCHCR1-221ENST00000507226 BRD4O60885 1362 aaPredicted RBP24.86■■□□□ 1.57
CCHCR1-221ENST00000507226 MED1Q15648 1581 aaPredicted RBP24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms