RNA–Protein interactions for RNA: ENST00000507197.5

SNHG4-204, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 2 BASIC

Gene SNHG4, Length 865 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-204ENST00000507197 ESCO1Q5FWF5 840 aa19.05■□□□□ 0.64
SNHG4-204ENST00000507197 NGLY1Q96IV0 654 aa19.05■□□□□ 0.64
SNHG4-204ENST00000507197 TECPR2O15040 1411 aa19.05■□□□□ 0.64
SNHG4-204ENST00000507197 CDC42BPGQ6DT37 1551 aa19.05■□□□□ 0.64
SNHG4-204ENST00000507197 LRPPRCP42704 1394 aaKnown RBP19.05■□□□□ 0.64
SNHG4-204ENST00000507197 ABCC11Q96J66 1382 aa19.05■□□□□ 0.64
SNHG4-204ENST00000507197 RBM6P78332 1123 aaKnown RBP19.04■□□□□ 0.64
SNHG4-204ENST00000507197 QTRT2Q9H974 415 aaKnown RBP19.04■□□□□ 0.64
SNHG4-204ENST00000507197 STK26Q9P289 416 aa19.04■□□□□ 0.64
SNHG4-204ENST00000507197 ADAMTS2O95450 1211 aa19.03■□□□□ 0.64
SNHG4-204ENST00000507197 UPF1Q92900 1129 aaKnown RBP eCLIP19.03■□□□□ 0.64
SNHG4-204ENST00000507197 PIK3C2GO75747 1445 aa19.02■□□□□ 0.64
SNHG4-204ENST00000507197 TMEM132EQ6IEE7 984 aa18.99■□□□□ 0.63
SNHG4-204ENST00000507197 WAPLQ7Z5K2 1190 aa18.99■□□□□ 0.63
SNHG4-204ENST00000507197 SIRT1Q96EB6 747 aa18.99■□□□□ 0.63
SNHG4-204ENST00000507197 IFT172Q9UG01 1749 aa18.98■□□□□ 0.63
SNHG4-204ENST00000507197 USP21Q9UK80 565 aa18.98■□□□□ 0.63
SNHG4-204ENST00000507197 YTHDC2Q9H6S0 1430 aaKnown RBP18.98■□□□□ 0.63
SNHG4-204ENST00000507197 FOXO3O43524 673 aa18.97■□□□□ 0.63
SNHG4-204ENST00000507197 C14orf93Q9H972 538 aaKnown RBP18.97■□□□□ 0.63
SNHG4-204ENST00000507197 TRPC5Q9UL62 973 aaPredicted RBP18.97■□□□□ 0.63
SNHG4-204ENST00000507197 FNBP4Q8N3X1 1017 aaPredicted RBP18.96■□□□□ 0.63
SNHG4-204ENST00000507197 DHX57Q6P158 1386 aaKnown RBP18.95■□□□□ 0.62
SNHG4-204ENST00000507197 KNDC1Q76NI1 1749 aa18.95■□□□□ 0.62
SNHG4-204ENST00000507197 COL22A1Q8NFW1 1626 aaPredicted RBP18.95■□□□□ 0.62
SNHG4-204ENST00000507197 PXDNQ92626 1479 aa18.95■□□□□ 0.62
SNHG4-204ENST00000507197 RGS12O14924 1447 aa18.94■□□□□ 0.62
SNHG4-204ENST00000507197 NUTM2FA1L443 756 aa18.94■□□□□ 0.62
SNHG4-204ENST00000507197 MYOM2P54296 1465 aa18.94■□□□□ 0.62
SNHG4-204ENST00000507197 PLEKHH1Q9ULM0 1364 aa18.93■□□□□ 0.62
SNHG4-204ENST00000507197 NRXN1Q9ULB1 1477 aa18.92■□□□□ 0.62
SNHG4-204ENST00000507197 RAB3GAP2Q9H2M9 1393 aa18.92■□□□□ 0.62
SNHG4-204ENST00000507197 XPCQ01831 940 aaPredicted RBP18.91■□□□□ 0.62
SNHG4-204ENST00000507197 CFAP70Q5T0N1 1121 aa18.91■□□□□ 0.62
SNHG4-204ENST00000507197 PSME1Q06323 249 aa18.89■□□□□ 0.61
SNHG4-204ENST00000507197 KIF1AQ12756 1690 aa18.89■□□□□ 0.61
SNHG4-204ENST00000507197 FMN2Q9NZ56 1722 aa18.88■□□□□ 0.61
SNHG4-204ENST00000507197 STAC3Q96MF2 364 aa18.88■□□□□ 0.61
SNHG4-204ENST00000507197 POGKQ9P215 609 aa18.88■□□□□ 0.61
SNHG4-204ENST00000507197 SPATA31A3Q5VYP0 1347 aa18.88■□□□□ 0.61
SNHG4-204ENST00000507197 ATAD2Q6PL18 1390 aa18.88■□□□□ 0.61
SNHG4-204ENST00000507197 ATRNO75882 1429 aa18.88■□□□□ 0.61
SNHG4-204ENST00000507197 KRT28Q7Z3Y7 464 aa18.87■□□□□ 0.61
SNHG4-204ENST00000507197 PRAM1Q96QH2 718 aa18.87■□□□□ 0.61
SNHG4-204ENST00000507197 PHF8Q9UPP1 1060 aa18.87■□□□□ 0.61
SNHG4-204ENST00000507197 HAP1P54257 671 aaPredicted RBP18.85■□□□□ 0.61
SNHG4-204ENST00000507197 DLC1Q96QB1 1528 aa18.84■□□□□ 0.61
SNHG4-204ENST00000507197 BCL9LQ86UU0 1499 aa18.84■□□□□ 0.61
SNHG4-204ENST00000507197 HRCP23327 699 aa18.84■□□□□ 0.61
SNHG4-204ENST00000507197 SAFB2Q14151 953 aaKnown RBP eCLIP18.84■□□□□ 0.61
SNHG4-204ENST00000507197 TNS3Q68CZ2 1445 aa18.83■□□□□ 0.6
SNHG4-204ENST00000507197 UNC5CLQ8IV45 518 aa18.82■□□□□ 0.6
SNHG4-204ENST00000507197 GJD4Q96KN9 370 aaPredicted RBP18.82■□□□□ 0.6
SNHG4-204ENST00000507197 ANKARQ7Z5J8 1434 aa18.82■□□□□ 0.6
SNHG4-204ENST00000507197 SBNO1A3KN83 1393 aa18.81■□□□□ 0.6
SNHG4-204ENST00000507197 EIF3AQ14152 1382 aaKnown RBP18.81■□□□□ 0.6
SNHG4-204ENST00000507197 ARHGEF10O15013 1369 aa18.81■□□□□ 0.6
SNHG4-204ENST00000507197 DCAF11Q8TEB1 546 aa18.8■□□□□ 0.6
SNHG4-204ENST00000507197 MARF1Q9Y4F3 1742 aaKnown RBP18.8■□□□□ 0.6
SNHG4-204ENST00000507197 CCDC125Q86Z20 511 aa18.79■□□□□ 0.6
SNHG4-204ENST00000507197 TRAK1Q9UPV9 953 aa18.79■□□□□ 0.6
SNHG4-204ENST00000507197 KDM2AQ9Y2K7 1162 aa18.79■□□□□ 0.6
SNHG4-204ENST00000507197 SLIT2O94813 1529 aa18.79■□□□□ 0.6
SNHG4-204ENST00000507197 LMOD2Q6P5Q4 547 aa18.78■□□□□ 0.6
SNHG4-204ENST00000507197 ADGRB1O14514 1584 aa18.77■□□□□ 0.6
SNHG4-204ENST00000507197 ADGRB2O60241 1585 aa18.77■□□□□ 0.6
SNHG4-204ENST00000507197 USP32Q8NFA0 1604 aa18.76■□□□□ 0.59
SNHG4-204ENST00000507197 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.76■□□□□ 0.59
SNHG4-204ENST00000507197 GPRASP1Q5JY77 1395 aa18.76■□□□□ 0.59
SNHG4-204ENST00000507197 PMFBP1Q8TBY8 1022 aa18.75■□□□□ 0.59
SNHG4-204ENST00000507197 HIRIP3Q9BW71 556 aaPredicted RBP18.74■□□□□ 0.59
SNHG4-204ENST00000507197 MINK1Q8N4C8 1332 aaPredicted RBP18.74■□□□□ 0.59
SNHG4-204ENST00000507197 RALGAPBQ86X10 1494 aa18.73■□□□□ 0.59
SNHG4-204ENST00000507197 WASLO00401 505 aaPredicted RBP18.73■□□□□ 0.59
SNHG4-204ENST00000507197 CABLES1Q8TDN4 633 aa18.73■□□□□ 0.59
SNHG4-204ENST00000507197 VPS72Q15906 364 aa18.72■□□□□ 0.59
SNHG4-204ENST00000507197 RGPD8O14715 1765 aaPredicted RBP18.72■□□□□ 0.59
SNHG4-204ENST00000507197 TULP4Q9NRJ4 1543 aa18.71■□□□□ 0.59
SNHG4-204ENST00000507197 PLEKHG5O94827 1062 aa18.7■□□□□ 0.58
SNHG4-204ENST00000507197 NGDNQ8NEJ9 315 aaKnown RBP18.7■□□□□ 0.58
SNHG4-204ENST00000507197 ZRANB1Q9UGI0 708 aa18.7■□□□□ 0.58
SNHG4-204ENST00000507197 CCDC9Q9Y3X0 531 aaKnown RBP18.7■□□□□ 0.58
SNHG4-204ENST00000507197 GLI3P10071 1580 aa18.68■□□□□ 0.58
SNHG4-204ENST00000507197 SEPT12Q8IYM1 358 aa18.67■□□□□ 0.58
SNHG4-204ENST00000507197 PRR36Q9H6K5 1346 aa18.67■□□□□ 0.58
SNHG4-204ENST00000507197 EP400Q96L91 3159 aa18.67■□□□□ 0.58
SNHG4-204ENST00000507197 NWD2Q9ULI1 1742 aa18.66■□□□□ 0.58
SNHG4-204ENST00000507197 FAM83GA6ND36 823 aa18.66■□□□□ 0.58
SNHG4-204ENST00000507197 ONECUT3O60422 494 aaPredicted RBP18.66■□□□□ 0.58
SNHG4-204ENST00000507197 SF3B2Q13435 895 aaKnown RBP18.66■□□□□ 0.58
SNHG4-204ENST00000507197 BLMP54132 1417 aaPredicted RBP18.66■□□□□ 0.58
SNHG4-204ENST00000507197 PAK3O75914 559 aaPredicted RBP18.64■□□□□ 0.57
SNHG4-204ENST00000507197 PLCH1Q4KWH8 1693 aa18.63■□□□□ 0.57
SNHG4-204ENST00000507197 ABCA3Q99758 1704 aa18.63■□□□□ 0.57
SNHG4-204ENST00000507197 NUDT16Q96DE0 195 aaKnown RBP18.63■□□□□ 0.57
SNHG4-204ENST00000507197 BTG4Q9NY30 223 aa18.63■□□□□ 0.57
SNHG4-204ENST00000507197 TRPM3Q9HCF6 1732 aaPredicted RBP18.63■□□□□ 0.57
SNHG4-204ENST00000507197 A0A0G2JS52 829 aa18.62■□□□□ 0.57
SNHG4-204ENST00000507197 MYT1Q01538 1121 aa18.62■□□□□ 0.57
SNHG4-204ENST00000507197 KRT27Q7Z3Y8 459 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms