RNA–Protein interactions for RNA: ENST00000507079.5

NFKB1-206, Transcript of nuclear factor kappa B subunit 1, human

TSL 5

Gene NFKB1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFKB1-206	ENST00000507079	ARHGEF28	Q8N1W1	1705 aa	Known RBP	28.21	■■■□□ 2.11
NFKB1-206	ENST00000507079	AHDC1	Q5TGY3	1603 aa	Predicted RBP	28.2	■■■□□ 2.1
NFKB1-206	ENST00000507079	COL16A1	Q07092	1604 aa	Predicted RBP	28.18	■■■□□ 2.1
NFKB1-206	ENST00000507079	NHSL1	Q5SYE7	1610 aa		28.18	■■■□□ 2.1
NFKB1-206	ENST00000507079	FMN2	Q9NZ56	1722 aa		28.18	■■■□□ 2.1
NFKB1-206	ENST00000507079	C1orf167	Q5SNV9	1468 aa		28.17	■■■□□ 2.1
NFKB1-206	ENST00000507079	BRINP3	Q76B58	766 aa		28.17	■■■□□ 2.1
NFKB1-206	ENST00000507079	TRPM1	Q7Z4N2	1603 aa		28.15	■■■□□ 2.1
NFKB1-206	ENST00000507079	PRAM1	Q96QH2	718 aa		28.15	■■■□□ 2.1
NFKB1-206	ENST00000507079	TRAK1	Q9UPV9	953 aa		28.15	■■■□□ 2.1
NFKB1-206	ENST00000507079	ADGRB2	O60241	1585 aa		28.13	■■■□□ 2.09
NFKB1-206	ENST00000507079	POGK	Q9P215	609 aa		28.13	■■■□□ 2.09
NFKB1-206	ENST00000507079	MED1	Q15648	1581 aa	Predicted RBP	28.11	■■■□□ 2.09
NFKB1-206	ENST00000507079	SAFB2	Q14151	953 aa	Known RBP eCLIP	28.11	■■■□□ 2.09
NFKB1-206	ENST00000507079	TONSL	Q96HA7	1378 aa		28.11	■■■□□ 2.09
NFKB1-206	ENST00000507079	RGPD8	O14715	1765 aa	Predicted RBP	28.09	■■■□□ 2.09
NFKB1-206	ENST00000507079	NBPF1	Q3BBV0	1214 aa		28.07	■■■□□ 2.08
NFKB1-206	ENST00000507079	SHPRH	Q149N8	1683 aa		28.05	■■■□□ 2.08
NFKB1-206	ENST00000507079	ORAI2	Q96SN7	254 aa		28.04	■■■□□ 2.08
NFKB1-206	ENST00000507079	KIF1A	Q12756	1690 aa		28.03	■■■□□ 2.08
NFKB1-206	ENST00000507079	JCAD	Q9P266	1359 aa		28.02	■■■□□ 2.08
NFKB1-206	ENST00000507079	DISP3	Q9P2K9	1392 aa		28.02	■■■□□ 2.08
NFKB1-206	ENST00000507079	NUTM2F	A1L443	756 aa		28.02	■■■□□ 2.08
NFKB1-206	ENST00000507079	USP32	Q8NFA0	1604 aa		28	■■■□□ 2.07
NFKB1-206	ENST00000507079	MINK1	Q8N4C8	1332 aa	Predicted RBP	28	■■■□□ 2.07
NFKB1-206	ENST00000507079	ESCO1	Q5FWF5	840 aa		28	■■■□□ 2.07
NFKB1-206	ENST00000507079	DDX17	Q92841	729 aa	Known RBP	27.99	■■■□□ 2.07
NFKB1-206	ENST00000507079	QRICH2	Q9H0J4	1663 aa		27.99	■■■□□ 2.07
NFKB1-206	ENST00000507079	HIRIP3	Q9BW71	556 aa	Predicted RBP	27.98	■■■□□ 2.07
NFKB1-206	ENST00000507079	ROCK2	O75116	1388 aa	Known RBP	27.98	■■■□□ 2.07
NFKB1-206	ENST00000507079	ANKAR	Q7Z5J8	1434 aa		27.96	■■■□□ 2.07
NFKB1-206	ENST00000507079	NBPF8	Q3BBV2	869 aa		27.96	■■■□□ 2.07
NFKB1-206	ENST00000507079	TULP4	Q9NRJ4	1543 aa		27.96	■■■□□ 2.07
NFKB1-206	ENST00000507079	EIF3A	Q14152	1382 aa	Known RBP	27.96	■■■□□ 2.07
NFKB1-206	ENST00000507079	CLSPN	Q9HAW4	1339 aa		27.95	■■■□□ 2.07
NFKB1-206	ENST00000507079	CCER1	Q8TC90	406 aa	Predicted RBP	27.95	■■■□□ 2.06
NFKB1-206	ENST00000507079	ITSN1	Q15811	1721 aa		27.94	■■■□□ 2.06
NFKB1-206	ENST00000507079	RALGAPB	Q86X10	1494 aa		27.93	■■■□□ 2.06
NFKB1-206	ENST00000507079	NPHP3	Q7Z494	1330 aa		27.92	■■■□□ 2.06
NFKB1-206	ENST00000507079	LRRC59	Q96AG4	307 aa	Known RBP	27.92	■■■□□ 2.06
NFKB1-206	ENST00000507079	SOS2	Q07890	1332 aa	Predicted RBP	27.92	■■■□□ 2.06
NFKB1-206	ENST00000507079	WASL	O00401	505 aa	Predicted RBP	27.91	■■■□□ 2.06
NFKB1-206	ENST00000507079	CENPJ	Q9HC77	1338 aa	Predicted RBP	27.91	■■■□□ 2.06
NFKB1-206	ENST00000507079	PXDN	Q92626	1479 aa		27.9	■■■□□ 2.06
NFKB1-206	ENST00000507079	GPRASP1	Q5JY77	1395 aa		27.9	■■■□□ 2.06
NFKB1-206	ENST00000507079	SPATA31A6	Q5VVP1	1343 aa		27.9	■■■□□ 2.06
NFKB1-206	ENST00000507079	FOXO3	O43524	673 aa		27.88	■■■□□ 2.05
NFKB1-206	ENST00000507079	PHF8	Q9UPP1	1060 aa		27.87	■■■□□ 2.05
NFKB1-206	ENST00000507079	PNPLA6	Q8IY17	1366 aa		27.86	■■■□□ 2.05
NFKB1-206	ENST00000507079	PHF23	Q9BUL5	403 aa	Predicted RBP	27.86	■■■□□ 2.05
NFKB1-206	ENST00000507079	LRP6	O75581	1613 aa		27.85	■■■□□ 2.05
NFKB1-206	ENST00000507079	TOPAZ1	Q8N9V7	1692 aa		27.85	■■■□□ 2.05
NFKB1-206	ENST00000507079	ATP7B	P35670	1465 aa		27.85	■■■□□ 2.05
NFKB1-206	ENST00000507079	PRR36	Q9H6K5	1346 aa		27.85	■■■□□ 2.05
NFKB1-206	ENST00000507079	COL22A1	Q8NFW1	1626 aa	Predicted RBP	27.84	■■■□□ 2.05
NFKB1-206	ENST00000507079	XPC	Q01831	940 aa	Predicted RBP	27.83	■■■□□ 2.05
NFKB1-206	ENST00000507079	CDK19	Q9BWU1	502 aa		27.81	■■■□□ 2.04
NFKB1-206	ENST00000507079	CARD11	Q9BXL7	1154 aa		27.81	■■■□□ 2.04
NFKB1-206	ENST00000507079	PMFBP1	Q8TBY8	1022 aa		27.79	■■■□□ 2.04
NFKB1-206	ENST00000507079	TIMELESS	Q9UNS1	1208 aa		27.78	■■■□□ 2.04
NFKB1-206	ENST00000507079	NUTM2B	A6NNL0	878 aa	Predicted RBP	27.77	■■■□□ 2.04
NFKB1-206	ENST00000507079	NUTM2E	B1AL46	878 aa	Predicted RBP	27.77	■■■□□ 2.04
NFKB1-206	ENST00000507079	NUTM2A	Q8IVF1	878 aa	Predicted RBP	27.77	■■■□□ 2.04
NFKB1-206	ENST00000507079	NUDT16	Q96DE0	195 aa	Known RBP	27.77	■■■□□ 2.04
NFKB1-206	ENST00000507079	TRPM3	Q9HCF6	1732 aa	Predicted RBP	27.77	■■■□□ 2.04
NFKB1-206	ENST00000507079	KRT28	Q7Z3Y7	464 aa		27.76	■■■□□ 2.03
NFKB1-206	ENST00000507079	MEX3C	Q5U5Q3	659 aa	Known RBP	27.75	■■■□□ 2.03
NFKB1-206	ENST00000507079	PSME1	Q06323	249 aa		27.74	■■■□□ 2.03
NFKB1-206	ENST00000507079	TNS3	Q68CZ2	1445 aa		27.74	■■■□□ 2.03
NFKB1-206	ENST00000507079	SRPK2	P78362	688 aa	Known RBP	27.73	■■■□□ 2.03
NFKB1-206	ENST00000507079	SPATA31A3	Q5VYP0	1347 aa		27.72	■■■□□ 2.03
NFKB1-206	ENST00000507079	MARF1	Q9Y4F3	1742 aa	Known RBP	27.72	■■■□□ 2.03
NFKB1-206	ENST00000507079	SBNO1	A3KN83	1393 aa		27.72	■■■□□ 2.03
NFKB1-206	ENST00000507079	EVC2	Q86UK5	1308 aa		27.71	■■■□□ 2.03
NFKB1-206	ENST00000507079	SBNO2	Q9Y2G9	1366 aa		27.71	■■■□□ 2.03
NFKB1-206	ENST00000507079	NGDN	Q8NEJ9	315 aa	Known RBP	27.7	■■■□□ 2.02
NFKB1-206	ENST00000507079	CCDC61	Q9Y6R9	512 aa		27.7	■■■□□ 2.02
NFKB1-206	ENST00000507079	ALS2	Q96Q42	1657 aa		27.7	■■■□□ 2.02
NFKB1-206	ENST00000507079	CABP2	Q9NPB3	220 aa		27.69	■■■□□ 2.02
NFKB1-206	ENST00000507079	ABCA3	Q99758	1704 aa		27.68	■■■□□ 2.02
NFKB1-206	ENST00000507079	ILDR2	Q71H61	639 aa		27.68	■■■□□ 2.02
NFKB1-206	ENST00000507079	RGS17	Q9UGC6	210 aa	Predicted RBP	27.68	■■■□□ 2.02
NFKB1-206	ENST00000507079	PPIP5K1	Q6PFW1	1433 aa		27.67	■■■□□ 2.02
NFKB1-206	ENST00000507079	POLR3A	O14802	1390 aa	Predicted RBP	27.65	■■■□□ 2.02
NFKB1-206	ENST00000507079	ARHGEF10	O15013	1369 aa		27.65	■■■□□ 2.02
NFKB1-206	ENST00000507079	PLEKHG3	A1L390	1219 aa		27.63	■■■□□ 2.01
NFKB1-206	ENST00000507079	ACE	P12821	1306 aa		27.63	■■■□□ 2.01
NFKB1-206	ENST00000507079	ADAMTS2	O95450	1211 aa		27.62	■■■□□ 2.01
NFKB1-206	ENST00000507079	LMOD2	Q6P5Q4	547 aa		27.62	■■■□□ 2.01
NFKB1-206	ENST00000507079	C8orf37	Q96NL8	207 aa		27.6	■■■□□ 2.01
NFKB1-206	ENST00000507079	USP47	Q96K76	1375 aa		27.6	■■■□□ 2.01
NFKB1-206	ENST00000507079	CRYBG1	Q9Y4K1	1723 aa		27.59	■■■□□ 2.01
NFKB1-206	ENST00000507079	AKAP12	Q02952	1782 aa		27.59	■■■□□ 2.01
NFKB1-206	ENST00000507079	ATAD2	Q6PL18	1390 aa		27.59	■■■□□ 2.01
NFKB1-206	ENST00000507079	PAK3	O75914	559 aa	Predicted RBP	27.57	■■■□□ 2
NFKB1-206	ENST00000507079	ZNF772	Q68DY9	489 aa	Predicted RBP	27.57	■■■□□ 2
NFKB1-206	ENST00000507079	AFF2	P51816	1311 aa		27.57	■■■□□ 2
NFKB1-206	ENST00000507079	ST20-MTHFS	A0A0A6YYL1	179 aa		27.56	■■■□□ 2
NFKB1-206	ENST00000507079	POTEA	Q6S8J7	498 aa		27.56	■■■□□ 2
NFKB1-206	ENST00000507079	CABP1	Q9NZU7	370 aa		27.56	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms