RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 UNC13BO14795 1591 aa8.88□□□□□ -0.99
GYPB-208ENST00000507009 DIP2AQ14689 1571 aa8.88□□□□□ -0.99
GYPB-208ENST00000507009 ZNF326Q5BKZ1 582 aaKnown RBP8.88□□□□□ -0.99
GYPB-208ENST00000507009 DDX17Q92841 729 aaKnown RBP8.88□□□□□ -0.99
GYPB-208ENST00000507009 C8orf37Q96NL8 207 aa8.88□□□□□ -0.99
GYPB-208ENST00000507009 PTPRUQ92729 1446 aa8.88□□□□□ -0.99
GYPB-208ENST00000507009 NCOA3Q9Y6Q9 1424 aa8.87□□□□□ -0.99
GYPB-208ENST00000507009 ASXL1Q8IXJ9 1541 aa8.86□□□□□ -0.99
GYPB-208ENST00000507009 ADAMTS2O95450 1211 aa8.85□□□□□ -0.99
GYPB-208ENST00000507009 NUP155O75694 1391 aa8.85□□□□□ -0.99
GYPB-208ENST00000507009 PIK3R4Q99570 1358 aa8.85□□□□□ -0.99
GYPB-208ENST00000507009 IQGAP3Q86VI3 1631 aa8.84□□□□□ -0.99
GYPB-208ENST00000507009 PRR29P0C7W0 189 aa8.84□□□□□ -0.99
GYPB-208ENST00000507009 EVX2Q03828 476 aa8.84□□□□□ -0.99
GYPB-208ENST00000507009 PPARGC1BQ86YN6 1023 aaKnown RBP8.84□□□□□ -0.99
GYPB-208ENST00000507009 QTRT2Q9H974 415 aaKnown RBP8.84□□□□□ -0.99
GYPB-208ENST00000507009 NHSL1Q5SYE7 1610 aa8.83□□□□□ -1
GYPB-208ENST00000507009 RGS12O14924 1447 aa8.83□□□□□ -1
GYPB-208ENST00000507009 MST1RQ04912 1400 aa8.83□□□□□ -1
GYPB-208ENST00000507009 CHADLQ6NUI6 762 aa8.83□□□□□ -1
GYPB-208ENST00000507009 LRRC59Q96AG4 307 aaKnown RBP8.83□□□□□ -1
GYPB-208ENST00000507009 NGLY1Q96IV0 654 aa8.83□□□□□ -1
GYPB-208ENST00000507009 METP08581 1390 aa8.83□□□□□ -1
GYPB-208ENST00000507009 NRXN3Q9Y4C0 1643 aa8.83□□□□□ -1
GYPB-208ENST00000507009 SPHKAPQ2M3C7 1700 aa8.83□□□□□ -1
GYPB-208ENST00000507009 NALCNQ8IZF0 1738 aa8.83□□□□□ -1
GYPB-208ENST00000507009 XRN1Q8IZH2 1706 aaKnown RBP8.83□□□□□ -1
GYPB-208ENST00000507009 RBM6P78332 1123 aaKnown RBP8.82□□□□□ -1
GYPB-208ENST00000507009 PNPLA6Q8IY17 1366 aa8.82□□□□□ -1
GYPB-208ENST00000507009 CDK12Q9NYV4 1490 aaPredicted RBP8.82□□□□□ -1
GYPB-208ENST00000507009 DCCP43146 1447 aa8.81□□□□□ -1
GYPB-208ENST00000507009 SETD5Q9C0A6 1442 aa8.81□□□□□ -1
GYPB-208ENST00000507009 SETBP1Q9Y6X0 1596 aa8.8□□□□□ -1
GYPB-208ENST00000507009 ADGRL3Q9HAR2 1447 aa8.8□□□□□ -1
GYPB-208ENST00000507009 ROCK1Q13464 1354 aa8.79□□□□□ -1
GYPB-208ENST00000507009 USP21Q9UK80 565 aa8.79□□□□□ -1
GYPB-208ENST00000507009 ORAI2Q96SN7 254 aa8.78□□□□□ -1
GYPB-208ENST00000507009 CLTCL1P53675 1640 aa8.78□□□□□ -1
GYPB-208ENST00000507009 KIF1BO60333 1816 aa8.77□□□□□ -1
GYPB-208ENST00000507009 C1orf167Q5SNV9 1468 aa8.77□□□□□ -1
GYPB-208ENST00000507009 ATAD2Q6PL18 1390 aa8.77□□□□□ -1.01
GYPB-208ENST00000507009 NEXMIFQ5QGS0 1516 aa8.77□□□□□ -1.01
GYPB-208ENST00000507009 PLEKHG5O94827 1062 aa8.77□□□□□ -1.01
GYPB-208ENST00000507009 NUTM2FA1L443 756 aa8.76□□□□□ -1.01
GYPB-208ENST00000507009 C19orf67A6NJJ6 358 aa8.76□□□□□ -1.01
GYPB-208ENST00000507009 XPCQ01831 940 aaPredicted RBP8.76□□□□□ -1.01
GYPB-208ENST00000507009 TRPC5Q9UL62 973 aaPredicted RBP8.76□□□□□ -1.01
GYPB-208ENST00000507009 ZRANB1Q9UGI0 708 aa8.75□□□□□ -1.01
GYPB-208ENST00000507009 ROBO2Q9HCK4 1378 aa8.74□□□□□ -1.01
GYPB-208ENST00000507009 ESCO1Q5FWF5 840 aa8.74□□□□□ -1.01
GYPB-208ENST00000507009 STK26Q9P289 416 aa8.73□□□□□ -1.01
GYPB-208ENST00000507009 SOS2Q07890 1332 aaPredicted RBP8.73□□□□□ -1.01
GYPB-208ENST00000507009 ATRNO75882 1429 aa8.72□□□□□ -1.01
GYPB-208ENST00000507009 PTCH1Q13635 1447 aa8.72□□□□□ -1.01
GYPB-208ENST00000507009 SPDYE4A6NLX3 237 aa8.72□□□□□ -1.01
GYPB-208ENST00000507009 VGFO15240 615 aaPredicted RBP8.72□□□□□ -1.01
GYPB-208ENST00000507009 FOXO3O43524 673 aa8.72□□□□□ -1.01
GYPB-208ENST00000507009 MARF1Q9Y4F3 1742 aaKnown RBP8.71□□□□□ -1.01
GYPB-208ENST00000507009 HAP1P54257 671 aaPredicted RBP8.71□□□□□ -1.02
GYPB-208ENST00000507009 FNBP4Q8N3X1 1017 aaPredicted RBP8.71□□□□□ -1.02
GYPB-208ENST00000507009 LAMC1P11047 1609 aa8.71□□□□□ -1.02
GYPB-208ENST00000507009 COL22A1Q8NFW1 1626 aaPredicted RBP8.7□□□□□ -1.02
GYPB-208ENST00000507009 NPHP3Q7Z494 1330 aa8.7□□□□□ -1.02
GYPB-208ENST00000507009 PPLO60437 1756 aa8.69□□□□□ -1.02
GYPB-208ENST00000507009 WAPLQ7Z5K2 1190 aa8.69□□□□□ -1.02
GYPB-208ENST00000507009 GJD4Q96KN9 370 aaPredicted RBP8.69□□□□□ -1.02
GYPB-208ENST00000507009 CCDC9Q9Y3X0 531 aaKnown RBP8.69□□□□□ -1.02
GYPB-208ENST00000507009 HFM1A2PYH4 1435 aa8.69□□□□□ -1.02
GYPB-208ENST00000507009 MYOM2P54296 1465 aa8.69□□□□□ -1.02
GYPB-208ENST00000507009 A0A0G2JS52 829 aa8.68□□□□□ -1.02
GYPB-208ENST00000507009 MYT1Q01538 1121 aa8.68□□□□□ -1.02
GYPB-208ENST00000507009 SF3B2Q13435 895 aaKnown RBP8.68□□□□□ -1.02
GYPB-208ENST00000507009 RGL3Q3MIN7 710 aa8.68□□□□□ -1.02
GYPB-208ENST00000507009 LMOD2Q6P5Q4 547 aa8.68□□□□□ -1.02
GYPB-208ENST00000507009 DEFB132Q7Z7B7 95 aa8.68□□□□□ -1.02
GYPB-208ENST00000507009 NAIPQ13075 1403 aa8.68□□□□□ -1.02
GYPB-208ENST00000507009 BCL9LQ86UU0 1499 aa8.68□□□□□ -1.02
GYPB-208ENST00000507009 PXDNQ92626 1479 aa8.68□□□□□ -1.02
GYPB-208ENST00000507009 CDC42BPGQ6DT37 1551 aa8.68□□□□□ -1.02
GYPB-208ENST00000507009 BRWD3Q6RI45 1802 aa8.68□□□□□ -1.02
GYPB-208ENST00000507009 SRCAPQ6ZRS2 3230 aa8.67□□□□□ -1.02
GYPB-208ENST00000507009 GLI3P10071 1580 aa8.66□□□□□ -1.02
GYPB-208ENST00000507009 RALGAPBQ86X10 1494 aa8.66□□□□□ -1.02
GYPB-208ENST00000507009 LRPPRCP42704 1394 aaKnown RBP8.66□□□□□ -1.02
GYPB-208ENST00000507009 RPGRIP1LQ68CZ1 1315 aa8.66□□□□□ -1.02
GYPB-208ENST00000507009 ADGRF5Q8IZF2 1346 aa8.66□□□□□ -1.02
GYPB-208ENST00000507009 TMEM132EQ6IEE7 984 aa8.66□□□□□ -1.02
GYPB-208ENST00000507009 CCDC125Q86Z20 511 aa8.66□□□□□ -1.02
GYPB-208ENST00000507009 CABLES1Q8TDN4 633 aa8.66□□□□□ -1.02
GYPB-208ENST00000507009 FARP1Q9Y4F1 1045 aaPredicted RBP8.66□□□□□ -1.02
GYPB-208ENST00000507009 EP400Q96L91 3159 aa8.66□□□□□ -1.02
GYPB-208ENST00000507009 PLEKHH1Q9ULM0 1364 aa8.65□□□□□ -1.02
GYPB-208ENST00000507009 KRT28Q7Z3Y7 464 aa8.65□□□□□ -1.02
GYPB-208ENST00000507009 UNC5CLQ8IV45 518 aa8.65□□□□□ -1.02
GYPB-208ENST00000507009 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.65□□□□□ -1.03
GYPB-208ENST00000507009 BLMP54132 1417 aaPredicted RBP8.64□□□□□ -1.03
GYPB-208ENST00000507009 RGPD8O14715 1765 aaPredicted RBP8.64□□□□□ -1.03
GYPB-208ENST00000507009 FMN2Q9NZ56 1722 aa8.64□□□□□ -1.03
GYPB-208ENST00000507009 PSDA5PKW4 1024 aaPredicted RBP8.64□□□□□ -1.03
GYPB-208ENST00000507009 GABBR2O75899 941 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms