RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 USP46P62068 366 aa7.84□□□□□ -1.15
CDC42SE2-210ENST00000506929 QPCTQ16769 361 aa7.84□□□□□ -1.15
CDC42SE2-210ENST00000506929 PPP1R18Q6NYC8 613 aa7.84□□□□□ -1.15
CDC42SE2-210ENST00000506929 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.84□□□□□ -1.15
CDC42SE2-210ENST00000506929 SPTLC1O15269 473 aa7.83□□□□□ -1.16
CDC42SE2-210ENST00000506929 ADH1BP00325 375 aa7.83□□□□□ -1.16
CDC42SE2-210ENST00000506929 BRICD5Q6PL45 260 aa7.83□□□□□ -1.16
CDC42SE2-210ENST00000506929 FAM160A2Q8N612 972 aaPredicted RBP7.83□□□□□ -1.16
CDC42SE2-210ENST00000506929 PRDM9Q9NQV7 894 aa7.83□□□□□ -1.16
CDC42SE2-210ENST00000506929 CLK2P49760 499 aaKnown RBP7.81□□□□□ -1.16
CDC42SE2-210ENST00000506929 SH3D19Q5HYK7 790 aa7.81□□□□□ -1.16
CDC42SE2-210ENST00000506929 RTL5Q5HYW3 569 aaPredicted RBP7.81□□□□□ -1.16
CDC42SE2-210ENST00000506929 SALL2Q9Y467 1007 aaPredicted RBP7.81□□□□□ -1.16
CDC42SE2-210ENST00000506929 PPEF1O14829 653 aaPredicted RBP7.8□□□□□ -1.16
CDC42SE2-210ENST00000506929 SKIV2LQ15477 1246 aaKnown RBP7.8□□□□□ -1.16
CDC42SE2-210ENST00000506929 SPSB2Q99619 263 aa7.8□□□□□ -1.16
CDC42SE2-210ENST00000506929 C6orf229H3BNL8 230 aa7.79□□□□□ -1.16
CDC42SE2-210ENST00000506929 FMNL1O95466 1100 aaPredicted RBP7.79□□□□□ -1.16
CDC42SE2-210ENST00000506929 S1PR4O95977 384 aa7.79□□□□□ -1.16
CDC42SE2-210ENST00000506929 HRCP23327 699 aa7.79□□□□□ -1.16
CDC42SE2-210ENST00000506929 Q3C1V9 767 aa7.79□□□□□ -1.16
CDC42SE2-210ENST00000506929 SLC6A16Q9GZN6 736 aa7.79□□□□□ -1.16
CDC42SE2-210ENST00000506929 CFAP99D6REC4 459 aa7.78□□□□□ -1.16
CDC42SE2-210ENST00000506929 RNF223E7ERA6 249 aa7.78□□□□□ -1.16
CDC42SE2-210ENST00000506929 RSPH6AQ9H0K4 717 aa7.78□□□□□ -1.16
CDC42SE2-210ENST00000506929 LILRB3O75022 631 aa7.77□□□□□ -1.17
CDC42SE2-210ENST00000506929 ANKLE1Q8NAG6 615 aa7.77□□□□□ -1.17
CDC42SE2-210ENST00000506929 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.77□□□□□ -1.17
CDC42SE2-210ENST00000506929 PRKD2Q9BZL6 878 aa7.77□□□□□ -1.17
CDC42SE2-210ENST00000506929 ATP1B4Q9UN42 357 aaPredicted RBP7.77□□□□□ -1.17
CDC42SE2-210ENST00000506929 V9GY48 417 aaPredicted RBP7.77□□□□□ -1.17
CDC42SE2-210ENST00000506929 DIXDC1Q155Q3 683 aa7.76□□□□□ -1.17
CDC42SE2-210ENST00000506929 USB1Q9BQ65 265 aaKnown RBP7.76□□□□□ -1.17
CDC42SE2-210ENST00000506929 MTMR2Q13614 643 aa7.75□□□□□ -1.17
CDC42SE2-210ENST00000506929 PRR7Q8TB68 274 aa7.75□□□□□ -1.17
CDC42SE2-210ENST00000506929 GJA5P36382 358 aa7.74□□□□□ -1.17
CDC42SE2-210ENST00000506929 NUTM2BA6NNL0 878 aaPredicted RBP7.73□□□□□ -1.17
CDC42SE2-210ENST00000506929 NUTM2EB1AL46 878 aaPredicted RBP7.73□□□□□ -1.17
CDC42SE2-210ENST00000506929 MSS51Q4VC12 460 aa7.73□□□□□ -1.17
CDC42SE2-210ENST00000506929 PLA2G2CQ5R387 149 aa7.73□□□□□ -1.17
CDC42SE2-210ENST00000506929 NUTM2DQ5VT03 806 aaPredicted RBP7.73□□□□□ -1.17
CDC42SE2-210ENST00000506929 RETREG3Q86VR2 466 aa7.73□□□□□ -1.17
CDC42SE2-210ENST00000506929 NUTM2AQ8IVF1 878 aaPredicted RBP7.73□□□□□ -1.17
CDC42SE2-210ENST00000506929 EMID1Q96A84 441 aaPredicted RBP7.73□□□□□ -1.17
CDC42SE2-210ENST00000506929 PCMTD1Q96MG8 357 aaPredicted RBP7.73□□□□□ -1.17
CDC42SE2-210ENST00000506929 ZBTB3Q9H5J0 574 aa7.73□□□□□ -1.17
CDC42SE2-210ENST00000506929 PER1O15534 1290 aaPredicted RBP7.72□□□□□ -1.17
CDC42SE2-210ENST00000506929 TUSC1Q2TAM9 212 aa7.72□□□□□ -1.17
CDC42SE2-210ENST00000506929 GOPCQ9HD26 462 aa7.72□□□□□ -1.17
CDC42SE2-210ENST00000506929 SLC19A1P41440 591 aa7.71□□□□□ -1.18
CDC42SE2-210ENST00000506929 PRPF38BQ5VTL8 546 aaKnown RBP7.71□□□□□ -1.18
CDC42SE2-210ENST00000506929 TSC1Q92574 1164 aa7.71□□□□□ -1.18
CDC42SE2-210ENST00000506929 IRX2Q9BZI1 471 aaPredicted RBP7.71□□□□□ -1.18
CDC42SE2-210ENST00000506929 DXOO77932 396 aaKnown RBP7.7□□□□□ -1.18
CDC42SE2-210ENST00000506929 RFC5P40937 340 aa7.7□□□□□ -1.18
CDC42SE2-210ENST00000506929 CTDSPL2Q05D32 466 aa7.7□□□□□ -1.18
CDC42SE2-210ENST00000506929 JUNDP17535 347 aa7.69□□□□□ -1.18
CDC42SE2-210ENST00000506929 MMP16P51512 607 aa7.69□□□□□ -1.18
CDC42SE2-210ENST00000506929 TMEM132AQ24JP5 1023 aa7.69□□□□□ -1.18
CDC42SE2-210ENST00000506929 PPP2R2DQ66LE6 453 aa7.69□□□□□ -1.18
CDC42SE2-210ENST00000506929 FCF1Q9Y324 198 aaKnown RBP7.69□□□□□ -1.18
CDC42SE2-210ENST00000506929 PTCRAQ6ISU1 281 aaPredicted RBP7.68□□□□□ -1.18
CDC42SE2-210ENST00000506929 AP1G2O75843 785 aa7.67□□□□□ -1.18
CDC42SE2-210ENST00000506929 LIAT1Q6ZQX7 453 aa7.67□□□□□ -1.18
CDC42SE2-210ENST00000506929 LRRN4Q8WUT4 740 aa7.67□□□□□ -1.18
CDC42SE2-210ENST00000506929 SPDYE5A6NIY4 337 aa7.66□□□□□ -1.18
CDC42SE2-210ENST00000506929 LAPTM4AQ15012 233 aa7.66□□□□□ -1.18
CDC42SE2-210ENST00000506929 SPRYD7Q5W111 196 aa7.66□□□□□ -1.18
CDC42SE2-210ENST00000506929 CCDC24Q8N4L8 307 aa7.66□□□□□ -1.18
CDC42SE2-210ENST00000506929 RPIAP49247 311 aa7.65□□□□□ -1.18
CDC42SE2-210ENST00000506929 LYPD8Q6UX82 237 aa7.65□□□□□ -1.18
CDC42SE2-210ENST00000506929 ZNF598Q86UK7 904 aaKnown RBP7.65□□□□□ -1.18
CDC42SE2-210ENST00000506929 EPS8L1Q8TE68 723 aa7.65□□□□□ -1.18
CDC42SE2-210ENST00000506929 HMX1Q9NP08 348 aaPredicted RBP7.65□□□□□ -1.18
CDC42SE2-210ENST00000506929 MAP10Q9P2G4 905 aa7.65□□□□□ -1.18
CDC42SE2-210ENST00000506929 SNRKQ9NRH2 765 aa7.64□□□□□ -1.19
CDC42SE2-210ENST00000506929 GFRA3O60609 400 aa7.63□□□□□ -1.19
CDC42SE2-210ENST00000506929 CD2BP2O95400 341 aaKnown RBP7.63□□□□□ -1.19
CDC42SE2-210ENST00000506929 NUDT12Q9BQG2 462 aa7.63□□□□□ -1.19
CDC42SE2-210ENST00000506929 ZBTB24O43167 697 aaPredicted RBP7.62□□□□□ -1.19
CDC42SE2-210ENST00000506929 USP17L8P0C7I0 530 aa7.62□□□□□ -1.19
CDC42SE2-210ENST00000506929 ZNF697Q5TEC3 545 aa7.62□□□□□ -1.19
CDC42SE2-210ENST00000506929 DESI1Q6ICB0 168 aa7.62□□□□□ -1.19
CDC42SE2-210ENST00000506929 PDZRN3Q9UPQ7 1066 aa7.62□□□□□ -1.19
CDC42SE2-210ENST00000506929 F12P00748 615 aaPredicted RBP7.61□□□□□ -1.19
CDC42SE2-210ENST00000506929 CCNYL3P0C7X3 344 aa7.61□□□□□ -1.19
CDC42SE2-210ENST00000506929 PTPRNQ16849 979 aa7.61□□□□□ -1.19
CDC42SE2-210ENST00000506929 NRG2O14511 850 aaPredicted RBP7.6□□□□□ -1.19
CDC42SE2-210ENST00000506929 CTHP32929 405 aa7.6□□□□□ -1.19
CDC42SE2-210ENST00000506929 NR6A1Q15406 480 aa7.6□□□□□ -1.19
CDC42SE2-210ENST00000506929 EVA1BQ9NVM1 165 aa7.6□□□□□ -1.19
CDC42SE2-210ENST00000506929 KCNH2Q12809 1159 aa7.59□□□□□ -1.19
CDC42SE2-210ENST00000506929 HELBQ8NG08 1087 aaPredicted RBP7.59□□□□□ -1.19
CDC42SE2-210ENST00000506929 PRR20EP86478 221 aa7.58□□□□□ -1.2
CDC42SE2-210ENST00000506929 PRR20CP86479 221 aa7.58□□□□□ -1.2
CDC42SE2-210ENST00000506929 PRR20DP86480 221 aa7.58□□□□□ -1.2
CDC42SE2-210ENST00000506929 PRR20BP86481 221 aa7.58□□□□□ -1.2
CDC42SE2-210ENST00000506929 PRR20AP86496 221 aa7.58□□□□□ -1.2
CDC42SE2-210ENST00000506929 TRIM32Q13049 653 aa7.58□□□□□ -1.2
CDC42SE2-210ENST00000506929 LINC01559Q495D7 138 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms