RNA–Protein interactions for RNA: ENST00000506874.1

SNX2-205, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 200 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-205ENST00000506874 ESCO1Q5FWF5 840 aa24.18■■□□□ 1.46
SNX2-205ENST00000506874 SPATA31E1Q6ZUB1 1445 aa24.18■■□□□ 1.46
SNX2-205ENST00000506874 TMEM132EQ6IEE7 984 aa24.17■■□□□ 1.46
SNX2-205ENST00000506874 WAPLQ7Z5K2 1190 aa24.17■■□□□ 1.46
SNX2-205ENST00000506874 CDK12Q9NYV4 1490 aaPredicted RBP24.17■■□□□ 1.46
SNX2-205ENST00000506874 ANKRD30BQ9BXX2 1392 aa24.16■■□□□ 1.46
SNX2-205ENST00000506874 NUTM2FA1L443 756 aa24.15■■□□□ 1.46
SNX2-205ENST00000506874 RBM6P78332 1123 aaKnown RBP24.15■■□□□ 1.46
SNX2-205ENST00000506874 IFT172Q9UG01 1749 aa24.15■■□□□ 1.46
SNX2-205ENST00000506874 CDC42BPGQ6DT37 1551 aa24.14■■□□□ 1.45
SNX2-205ENST00000506874 XPCQ01831 940 aaPredicted RBP24.13■■□□□ 1.45
SNX2-205ENST00000506874 LRPPRCP42704 1394 aaKnown RBP24.13■■□□□ 1.45
SNX2-205ENST00000506874 NPHP3Q7Z494 1330 aa24.11■■□□□ 1.45
SNX2-205ENST00000506874 RGS12O14924 1447 aa24.11■■□□□ 1.45
SNX2-205ENST00000506874 FOXO3O43524 673 aa24.11■■□□□ 1.45
SNX2-205ENST00000506874 USP21Q9UK80 565 aa24.11■■□□□ 1.45
SNX2-205ENST00000506874 PLEKHH1Q9ULM0 1364 aa24.11■■□□□ 1.45
SNX2-205ENST00000506874 TECPR2O15040 1411 aa24.1■■□□□ 1.45
SNX2-205ENST00000506874 PIK3C2GO75747 1445 aa24.09■■□□□ 1.45
SNX2-205ENST00000506874 ABCC11Q96J66 1382 aa24.08■■□□□ 1.45
SNX2-205ENST00000506874 KNDC1Q76NI1 1749 aa24.07■■□□□ 1.44
SNX2-205ENST00000506874 PXDNQ92626 1479 aa24.07■■□□□ 1.44
SNX2-205ENST00000506874 COL22A1Q8NFW1 1626 aaPredicted RBP24.06■■□□□ 1.44
SNX2-205ENST00000506874 YTHDC2Q9H6S0 1430 aaKnown RBP24.06■■□□□ 1.44
SNX2-205ENST00000506874 TRPC5Q9UL62 973 aaPredicted RBP24.05■■□□□ 1.44
SNX2-205ENST00000506874 MYOM2P54296 1465 aa24.03■■□□□ 1.44
SNX2-205ENST00000506874 FNBP4Q8N3X1 1017 aaPredicted RBP24.03■■□□□ 1.44
SNX2-205ENST00000506874 FMN2Q9NZ56 1722 aa24.02■■□□□ 1.44
SNX2-205ENST00000506874 CFAP70Q5T0N1 1121 aa24.02■■□□□ 1.44
SNX2-205ENST00000506874 C14orf93Q9H972 538 aaKnown RBP24.02■■□□□ 1.44
SNX2-205ENST00000506874 SAFB2Q14151 953 aaKnown RBP eCLIP23.99■■□□□ 1.43
SNX2-205ENST00000506874 ACIN1Q9UKV3 1341 aaKnown RBP23.99■■□□□ 1.43
SNX2-205ENST00000506874 MARF1Q9Y4F3 1742 aaKnown RBP23.98■■□□□ 1.43
SNX2-205ENST00000506874 DHX57Q6P158 1386 aaKnown RBP23.98■■□□□ 1.43
SNX2-205ENST00000506874 ATRNO75882 1429 aa23.98■■□□□ 1.43
SNX2-205ENST00000506874 RGPD8O14715 1765 aaPredicted RBP23.98■■□□□ 1.43
SNX2-205ENST00000506874 RAB3GAP2Q9H2M9 1393 aa23.96■■□□□ 1.43
SNX2-205ENST00000506874 KRT28Q7Z3Y7 464 aa23.96■■□□□ 1.43
SNX2-205ENST00000506874 SIRT1Q96EB6 747 aa23.96■■□□□ 1.43
SNX2-205ENST00000506874 KIF1AQ12756 1690 aa23.95■■□□□ 1.43
SNX2-205ENST00000506874 NRXN1Q9ULB1 1477 aa23.95■■□□□ 1.42
SNX2-205ENST00000506874 PLEKHG5O94827 1062 aa23.95■■□□□ 1.42
SNX2-205ENST00000506874 BCL9LQ86UU0 1499 aa23.94■■□□□ 1.42
SNX2-205ENST00000506874 ATAD2Q6PL18 1390 aa23.94■■□□□ 1.42
SNX2-205ENST00000506874 SPATA31A3Q5VYP0 1347 aa23.94■■□□□ 1.42
SNX2-205ENST00000506874 PRAM1Q96QH2 718 aa23.94■■□□□ 1.42
SNX2-205ENST00000506874 PHF8Q9UPP1 1060 aa23.93■■□□□ 1.42
SNX2-205ENST00000506874 POGKQ9P215 609 aa23.92■■□□□ 1.42
SNX2-205ENST00000506874 HAP1P54257 671 aaPredicted RBP23.89■■□□□ 1.41
SNX2-205ENST00000506874 GJD4Q96KN9 370 aaPredicted RBP23.89■■□□□ 1.41
SNX2-205ENST00000506874 KDM2AQ9Y2K7 1162 aa23.89■■□□□ 1.41
SNX2-205ENST00000506874 PSME1Q06323 249 aa23.88■■□□□ 1.41
SNX2-205ENST00000506874 LMOD2Q6P5Q4 547 aa23.88■■□□□ 1.41
SNX2-205ENST00000506874 CABLES1Q8TDN4 633 aa23.87■■□□□ 1.41
SNX2-205ENST00000506874 TNS3Q68CZ2 1445 aa23.86■■□□□ 1.41
SNX2-205ENST00000506874 UNC5CLQ8IV45 518 aa23.86■■□□□ 1.41
SNX2-205ENST00000506874 PMFBP1Q8TBY8 1022 aa23.86■■□□□ 1.41
SNX2-205ENST00000506874 TRAK1Q9UPV9 953 aa23.86■■□□□ 1.41
SNX2-205ENST00000506874 HIRIP3Q9BW71 556 aaPredicted RBP23.85■■□□□ 1.41
SNX2-205ENST00000506874 USP32Q8NFA0 1604 aa23.84■■□□□ 1.41
SNX2-205ENST00000506874 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.84■■□□□ 1.41
SNX2-205ENST00000506874 SLIT2O94813 1529 aa23.84■■□□□ 1.41
SNX2-205ENST00000506874 DLC1Q96QB1 1528 aa23.84■■□□□ 1.41
SNX2-205ENST00000506874 DCAF11Q8TEB1 546 aa23.83■■□□□ 1.41
SNX2-205ENST00000506874 ADGRB1O14514 1584 aa23.82■■□□□ 1.4
SNX2-205ENST00000506874 MINK1Q8N4C8 1332 aaPredicted RBP23.82■■□□□ 1.4
SNX2-205ENST00000506874 RALGAPBQ86X10 1494 aa23.81■■□□□ 1.4
SNX2-205ENST00000506874 SBNO1A3KN83 1393 aa23.81■■□□□ 1.4
SNX2-205ENST00000506874 GLI3P10071 1580 aa23.8■■□□□ 1.4
SNX2-205ENST00000506874 ANKARQ7Z5J8 1434 aa23.78■■□□□ 1.4
SNX2-205ENST00000506874 CCDC9Q9Y3X0 531 aaKnown RBP23.78■■□□□ 1.4
SNX2-205ENST00000506874 EP400Q96L91 3159 aa23.78■■□□□ 1.4
SNX2-205ENST00000506874 ADGRB2O60241 1585 aa23.78■■□□□ 1.4
SNX2-205ENST00000506874 ARHGEF10O15013 1369 aa23.78■■□□□ 1.4
SNX2-205ENST00000506874 ABCA3Q99758 1704 aa23.76■■□□□ 1.39
SNX2-205ENST00000506874 PLCH1Q4KWH8 1693 aa23.76■■□□□ 1.39
SNX2-205ENST00000506874 PRR36Q9H6K5 1346 aa23.75■■□□□ 1.39
SNX2-205ENST00000506874 BRWD3Q6RI45 1802 aa23.75■■□□□ 1.39
SNX2-205ENST00000506874 VPS72Q15906 364 aa23.74■■□□□ 1.39
SNX2-205ENST00000506874 FAM83GA6ND36 823 aa23.73■■□□□ 1.39
SNX2-205ENST00000506874 WASLO00401 505 aaPredicted RBP23.73■■□□□ 1.39
SNX2-205ENST00000506874 CCDC125Q86Z20 511 aa23.73■■□□□ 1.39
SNX2-205ENST00000506874 SEPT12Q8IYM1 358 aa23.73■■□□□ 1.39
SNX2-205ENST00000506874 GPRASP1Q5JY77 1395 aa23.73■■□□□ 1.39
SNX2-205ENST00000506874 ZRANB1Q9UGI0 708 aa23.72■■□□□ 1.39
SNX2-205ENST00000506874 NWD2Q9ULI1 1742 aa23.72■■□□□ 1.39
SNX2-205ENST00000506874 TRPM3Q9HCF6 1732 aaPredicted RBP23.71■■□□□ 1.39
SNX2-205ENST00000506874 EIF3AQ14152 1382 aaKnown RBP23.71■■□□□ 1.39
SNX2-205ENST00000506874 TULP4Q9NRJ4 1543 aa23.7■■□□□ 1.38
SNX2-205ENST00000506874 NGDNQ8NEJ9 315 aaKnown RBP23.7■■□□□ 1.38
SNX2-205ENST00000506874 STAC3Q96MF2 364 aa23.69■■□□□ 1.38
SNX2-205ENST00000506874 PAK3O75914 559 aaPredicted RBP23.68■■□□□ 1.38
SNX2-205ENST00000506874 HRCP23327 699 aa23.68■■□□□ 1.38
SNX2-205ENST00000506874 A0A0G2JS52 829 aa23.67■■□□□ 1.38
SNX2-205ENST00000506874 MYT1Q01538 1121 aa23.67■■□□□ 1.38
SNX2-205ENST00000506874 ALS2Q96Q42 1657 aa23.67■■□□□ 1.38
SNX2-205ENST00000506874 BTG4Q9NY30 223 aa23.66■■□□□ 1.38
SNX2-205ENST00000506874 ARHGEF28Q8N1W1 1705 aaKnown RBP23.66■■□□□ 1.38
SNX2-205ENST00000506874 BLMP54132 1417 aaPredicted RBP23.66■■□□□ 1.38
SNX2-205ENST00000506874 KRT27Q7Z3Y8 459 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms