RNA–Protein interactions for RNA: ENST00000506687.5

CPNE4-207, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-207ENST00000506687 RTEL1-TNFRSF6BF6WH68 1400 aa7.41□□□□□ -1.22
CPNE4-207ENST00000506687 RGS12O14924 1447 aa7.41□□□□□ -1.22
CPNE4-207ENST00000506687 ABCC5O15440 1437 aa7.41□□□□□ -1.22
CPNE4-207ENST00000506687 DEPDC5O75140 1603 aa7.41□□□□□ -1.22
CPNE4-207ENST00000506687 POLR1AO95602 1720 aaPredicted RBP7.41□□□□□ -1.22
CPNE4-207ENST00000506687 KIDINS220Q9ULH0 1771 aa7.41□□□□□ -1.22
CPNE4-207ENST00000506687 GGT6Q6P531 493 aa7.4□□□□□ -1.22
CPNE4-207ENST00000506687 SPAG9O60271 1321 aaKnown RBP7.4□□□□□ -1.22
CPNE4-207ENST00000506687 RRBP1Q9P2E9 1410 aaKnown RBP7.4□□□□□ -1.22
CPNE4-207ENST00000506687 CCDC141Q6ZP82 1450 aa7.4□□□□□ -1.22
CPNE4-207ENST00000506687 FAM135AQ9P2D6 1515 aa7.4□□□□□ -1.22
CPNE4-207ENST00000506687 DSG3P32926 999 aa7.39□□□□□ -1.23
CPNE4-207ENST00000506687 MNX1P50219 401 aaPredicted RBP7.39□□□□□ -1.23
CPNE4-207ENST00000506687 INO80Q9ULG1 1556 aaPredicted RBP7.38□□□□□ -1.23
CPNE4-207ENST00000506687 DAPK1P53355 1430 aa7.38□□□□□ -1.23
CPNE4-207ENST00000506687 AFF2P51816 1311 aa7.38□□□□□ -1.23
CPNE4-207ENST00000506687 RAD21O60216 631 aa7.38□□□□□ -1.23
CPNE4-207ENST00000506687 TSPY4P0CV99 314 aa7.38□□□□□ -1.23
CPNE4-207ENST00000506687 TSPY10P0CW01 314 aa7.38□□□□□ -1.23
CPNE4-207ENST00000506687 CREBZFQ9NS37 354 aa7.38□□□□□ -1.23
CPNE4-207ENST00000506687 MAST1Q9Y2H9 1570 aa7.37□□□□□ -1.23
CPNE4-207ENST00000506687 ATP7AQ04656 1500 aa7.37□□□□□ -1.23
CPNE4-207ENST00000506687 TMEM94Q12767 1356 aa7.37□□□□□ -1.23
CPNE4-207ENST00000506687 SENP3-EIF4A1A0A087X0R7 540 aa7.37□□□□□ -1.23
CPNE4-207ENST00000506687 TRAK2O60296 914 aa7.37□□□□□ -1.23
CPNE4-207ENST00000506687 FBXO31Q5XUX0 539 aaPredicted RBP7.37□□□□□ -1.23
CPNE4-207ENST00000506687 CLUAP1Q96AJ1 413 aa7.37□□□□□ -1.23
CPNE4-207ENST00000506687 NGLY1Q96IV0 654 aa7.37□□□□□ -1.23
CPNE4-207ENST00000506687 LARP6Q9BRS8 491 aaKnown RBP7.37□□□□□ -1.23
CPNE4-207ENST00000506687 QTRT2Q9H974 415 aaKnown RBP7.37□□□□□ -1.23
CPNE4-207ENST00000506687 ROBO1Q9Y6N7 1651 aa7.37□□□□□ -1.23
CPNE4-207ENST00000506687 LRP5O75197 1615 aa7.37□□□□□ -1.23
CPNE4-207ENST00000506687 NLRP1Q9C000 1473 aa7.36□□□□□ -1.23
CPNE4-207ENST00000506687 IQGAP1P46940 1657 aa7.36□□□□□ -1.23
CPNE4-207ENST00000506687 CLTCQ00610 1675 aaKnown RBP7.36□□□□□ -1.23
CPNE4-207ENST00000506687 PDAP1Q13442 181 aaKnown RBP7.36□□□□□ -1.23
CPNE4-207ENST00000506687 FAM50AQ14320 339 aaKnown RBP7.36□□□□□ -1.23
CPNE4-207ENST00000506687 ZNF467Q7Z7K2 595 aaPredicted RBP7.36□□□□□ -1.23
CPNE4-207ENST00000506687 SLAIN2Q9P270 581 aa7.36□□□□□ -1.23
CPNE4-207ENST00000506687 UGGT1Q9NYU2 1555 aa7.36□□□□□ -1.23
CPNE4-207ENST00000506687 STRCP1A6NGW2 1772 aa7.36□□□□□ -1.23
CPNE4-207ENST00000506687 DHX29Q7Z478 1369 aaKnown RBP7.35□□□□□ -1.23
CPNE4-207ENST00000506687 PLEKHG3A1L390 1219 aa7.35□□□□□ -1.23
CPNE4-207ENST00000506687 A6NJR5 290 aa7.35□□□□□ -1.23
CPNE4-207ENST00000506687 MLLT3P42568 568 aaPredicted RBP7.35□□□□□ -1.23
CPNE4-207ENST00000506687 AEBP1Q8IUX7 1158 aa7.35□□□□□ -1.23
CPNE4-207ENST00000506687 ADGRL2O95490 1459 aa7.35□□□□□ -1.23
CPNE4-207ENST00000506687 A2MP01023 1474 aa7.35□□□□□ -1.23
CPNE4-207ENST00000506687 CROCC2H7BZ55 1655 aa7.35□□□□□ -1.23
CPNE4-207ENST00000506687 PLXNC1O60486 1568 aa7.34□□□□□ -1.23
CPNE4-207ENST00000506687 TRAIPQ9BWF2 469 aa7.34□□□□□ -1.23
CPNE4-207ENST00000506687 ROCK1Q13464 1354 aa7.33□□□□□ -1.24
CPNE4-207ENST00000506687 ADGBQ8N7X0 1667 aa7.33□□□□□ -1.24
CPNE4-207ENST00000506687 PZPP20742 1482 aa7.33□□□□□ -1.24
CPNE4-207ENST00000506687 DDRGK1Q96HY6 314 aa7.33□□□□□ -1.24
CPNE4-207ENST00000506687 CHIC2Q9UKJ5 165 aa7.33□□□□□ -1.24
CPNE4-207ENST00000506687 ARIH1Q9Y4X5 557 aaPredicted RBP7.33□□□□□ -1.24
CPNE4-207ENST00000506687 ONECUT3O60422 494 aaPredicted RBP7.32□□□□□ -1.24
CPNE4-207ENST00000506687 PDE4AP27815 886 aa7.32□□□□□ -1.24
CPNE4-207ENST00000506687 PROSER2Q86WR7 435 aaPredicted RBP7.32□□□□□ -1.24
CPNE4-207ENST00000506687 RRP7BPQ9NSQ0 103 aa7.32□□□□□ -1.24
CPNE4-207ENST00000506687 MSH6P52701 1360 aa7.32□□□□□ -1.24
CPNE4-207ENST00000506687 ANKRD30AQ9BXX3 1397 aa7.32□□□□□ -1.24
CPNE4-207ENST00000506687 KIF15Q9NS87 1388 aa7.32□□□□□ -1.24
CPNE4-207ENST00000506687 COL16A1Q07092 1604 aaPredicted RBP7.31□□□□□ -1.24
CPNE4-207ENST00000506687 PHLPP1O60346 1717 aa7.31□□□□□ -1.24
CPNE4-207ENST00000506687 KCNA6P17658 529 aa7.31□□□□□ -1.24
CPNE4-207ENST00000506687 PCDHB8Q9UN66 801 aa7.31□□□□□ -1.24
CPNE4-207ENST00000506687 PCDHB13Q9Y5F0 798 aa7.31□□□□□ -1.24
CPNE4-207ENST00000506687 DUOX2Q9NRD8 1548 aa7.31□□□□□ -1.24
CPNE4-207ENST00000506687 NWD1Q149M9 1564 aa7.3□□□□□ -1.24
CPNE4-207ENST00000506687 PRR29P0C7W0 189 aa7.3□□□□□ -1.24
CPNE4-207ENST00000506687 RGS22Q8NE09 1264 aa7.3□□□□□ -1.24
CPNE4-207ENST00000506687 C8orf37Q96NL8 207 aa7.3□□□□□ -1.24
CPNE4-207ENST00000506687 NHSL1Q5SYE7 1610 aa7.3□□□□□ -1.24
CPNE4-207ENST00000506687 SCAF11Q99590 1463 aaKnown RBP7.3□□□□□ -1.24
CPNE4-207ENST00000506687 ERBINQ96RT1 1412 aa7.29□□□□□ -1.24
CPNE4-207ENST00000506687 KIF3BO15066 747 aa7.29□□□□□ -1.24
CPNE4-207ENST00000506687 ITGAEP38570 1179 aa7.29□□□□□ -1.24
CPNE4-207ENST00000506687 PSEN1P49768 467 aa7.29□□□□□ -1.24
CPNE4-207ENST00000506687 NLRP6P59044 892 aa7.29□□□□□ -1.24
CPNE4-207ENST00000506687 MFSD10Q14728 455 aa7.29□□□□□ -1.24
CPNE4-207ENST00000506687 TXNDC2Q86VQ3 553 aa7.29□□□□□ -1.24
CPNE4-207ENST00000506687 FBXO22Q8NEZ5 403 aa7.29□□□□□ -1.24
CPNE4-207ENST00000506687 MTMR7Q9Y216 660 aa7.29□□□□□ -1.24
CPNE4-207ENST00000506687 BLMP54132 1417 aaPredicted RBP7.28□□□□□ -1.24
CPNE4-207ENST00000506687 NAIPQ13075 1403 aa7.28□□□□□ -1.24
CPNE4-207ENST00000506687 ANKRD50Q9ULJ7 1429 aa7.28□□□□□ -1.24
CPNE4-207ENST00000506687 EIF2AK4Q9P2K8 1649 aaKnown RBP7.28□□□□□ -1.24
CPNE4-207ENST00000506687 IGSF3O75054 1194 aa7.28□□□□□ -1.24
CPNE4-207ENST00000506687 LTKP29376 864 aa7.28□□□□□ -1.24
CPNE4-207ENST00000506687 C1QTNF8P60827 252 aa7.28□□□□□ -1.24
CPNE4-207ENST00000506687 TMCO4Q5TGY1 634 aa7.28□□□□□ -1.24
CPNE4-207ENST00000506687 SPDYE1Q8NFV5 336 aaPredicted RBP7.28□□□□□ -1.24
CPNE4-207ENST00000506687 DDX27Q96GQ7 796 aaKnown RBP7.28□□□□□ -1.24
CPNE4-207ENST00000506687 CLEC11AQ9Y240 323 aa7.28□□□□□ -1.24
CPNE4-207ENST00000506687 WASHC2CQ9Y4E1 1318 aa7.27□□□□□ -1.24
CPNE4-207ENST00000506687 ABCC3O15438 1527 aa7.27□□□□□ -1.25
CPNE4-207ENST00000506687 MROH1Q8NDA8 1641 aa7.27□□□□□ -1.25
CPNE4-207ENST00000506687 TRPC5Q9UL62 973 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms