RNA–Protein interactions for RNA: ENST00000506626.1

SMAD1-205, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-205ENST00000506626 TTC24A2A3L6 582 aaPredicted RBP8.57□□□□□ -1.04
SMAD1-205ENST00000506626 LORP23490 312 aaPredicted RBP8.57□□□□□ -1.04
SMAD1-205ENST00000506626 PRDM9Q9NQV7 894 aa8.57□□□□□ -1.04
SMAD1-205ENST00000506626 DAXXQ9UER7 740 aaPredicted RBP8.57□□□□□ -1.04
SMAD1-205ENST00000506626 WNT7AO00755 349 aa8.56□□□□□ -1.04
SMAD1-205ENST00000506626 NLRP7Q8WX94 980 aa8.56□□□□□ -1.04
SMAD1-205ENST00000506626 RDH13Q8NBN7 331 aa8.55□□□□□ -1.04
SMAD1-205ENST00000506626 SNIP1Q8TAD8 396 aaKnown RBP8.55□□□□□ -1.04
SMAD1-205ENST00000506626 SENP2Q9HC62 589 aa8.55□□□□□ -1.04
SMAD1-205ENST00000506626 DDX11L8A8MPP1 907 aa8.54□□□□□ -1.04
SMAD1-205ENST00000506626 PHOX2BQ99453 314 aa8.54□□□□□ -1.04
SMAD1-205ENST00000506626 VSIG10Q8N0Z9 540 aa8.53□□□□□ -1.04
SMAD1-205ENST00000506626 J3QL48 77 aa8.52□□□□□ -1.05
SMAD1-205ENST00000506626 FMNL1O95466 1100 aaPredicted RBP8.52□□□□□ -1.05
SMAD1-205ENST00000506626 FUT2Q10981 343 aa8.52□□□□□ -1.05
SMAD1-205ENST00000506626 SLC27A5Q9Y2P5 690 aa8.52□□□□□ -1.05
SMAD1-205ENST00000506626 SALL2Q9Y467 1007 aaPredicted RBP8.52□□□□□ -1.05
SMAD1-205ENST00000506626 MSS51Q4VC12 460 aa8.51□□□□□ -1.05
SMAD1-205ENST00000506626 SULF1Q8IWU6 871 aa8.51□□□□□ -1.05
SMAD1-205ENST00000506626 KIFC2Q96AC6 838 aa8.51□□□□□ -1.05
SMAD1-205ENST00000506626 MRGPRX2Q96LB1 330 aa8.51□□□□□ -1.05
SMAD1-205ENST00000506626 ATP6V1AP38606 617 aa8.5□□□□□ -1.05
SMAD1-205ENST00000506626 TRIM32Q13049 653 aa8.5□□□□□ -1.05
SMAD1-205ENST00000506626 BRICD5Q6PL45 260 aa8.5□□□□□ -1.05
SMAD1-205ENST00000506626 HPS1Q92902 700 aa8.5□□□□□ -1.05
SMAD1-205ENST00000506626 FAM181BA6NEQ2 426 aa8.49□□□□□ -1.05
SMAD1-205ENST00000506626 ZBTB24O43167 697 aaPredicted RBP8.49□□□□□ -1.05
SMAD1-205ENST00000506626 TULP1O00294 542 aaPredicted RBP8.48□□□□□ -1.05
SMAD1-205ENST00000506626 GCGRP47871 477 aa8.48□□□□□ -1.05
SMAD1-205ENST00000506626 MAP2K5Q13163 448 aa8.48□□□□□ -1.05
SMAD1-205ENST00000506626 GMPRP36959 345 aa8.47□□□□□ -1.05
SMAD1-205ENST00000506626 RNF19BQ6ZMZ0 732 aa8.47□□□□□ -1.05
SMAD1-205ENST00000506626 ZSCAN1Q8NBB4 408 aa8.47□□□□□ -1.05
SMAD1-205ENST00000506626 SLC16A10Q8TF71 515 aa8.45□□□□□ -1.06
SMAD1-205ENST00000506626 NXF1Q9UBU9 619 aaKnown RBP8.45□□□□□ -1.06
SMAD1-205ENST00000506626 MMP16P51512 607 aa8.44□□□□□ -1.06
SMAD1-205ENST00000506626 REPIN1Q9BWE0 567 aaKnown RBP8.44□□□□□ -1.06
SMAD1-205ENST00000506626 IRF6O14896 467 aa8.43□□□□□ -1.06
SMAD1-205ENST00000506626 NPAS3Q8IXF0 933 aa8.43□□□□□ -1.06
SMAD1-205ENST00000506626 CD46P15529 392 aa8.42□□□□□ -1.06
SMAD1-205ENST00000506626 MINK1Q8N4C8 1332 aaPredicted RBP8.42□□□□□ -1.06
SMAD1-205ENST00000506626 SKOR1P84550 965 aa8.41□□□□□ -1.06
SMAD1-205ENST00000506626 GRIPAP1Q4V328 841 aa8.41□□□□□ -1.06
SMAD1-205ENST00000506626 IRF7Q92985 503 aa8.41□□□□□ -1.06
SMAD1-205ENST00000506626 H3BM21 787 aa8.4□□□□□ -1.06
SMAD1-205ENST00000506626 MDM2Q00987 491 aaPredicted RBP8.4□□□□□ -1.06
SMAD1-205ENST00000506626 CCDC102AQ96A19 550 aa8.4□□□□□ -1.06
SMAD1-205ENST00000506626 ERBB4Q15303 1308 aa8.39□□□□□ -1.07
SMAD1-205ENST00000506626 DXOO77932 396 aaKnown RBP8.39□□□□□ -1.07
SMAD1-205ENST00000506626 SUZ12Q15022 739 aaKnown RBP8.39□□□□□ -1.07
SMAD1-205ENST00000506626 TRIM46Q7Z4K8 759 aa8.39□□□□□ -1.07
SMAD1-205ENST00000506626 RC3H1Q5TC82 1133 aaKnown RBP8.38□□□□□ -1.07
SMAD1-205ENST00000506626 KDM4AO75164 1064 aa8.37□□□□□ -1.07
SMAD1-205ENST00000506626 BMP1P13497 986 aa8.37□□□□□ -1.07
SMAD1-205ENST00000506626 VEGFBP49765 207 aa8.37□□□□□ -1.07
SMAD1-205ENST00000506626 WNT7BP56706 349 aa8.37□□□□□ -1.07
SMAD1-205ENST00000506626 Q3C1V9 767 aa8.37□□□□□ -1.07
SMAD1-205ENST00000506626 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.36□□□□□ -1.07
SMAD1-205ENST00000506626 USP46P62068 366 aa8.34□□□□□ -1.07
SMAD1-205ENST00000506626 HLA-CQ95604 372 aa8.34□□□□□ -1.07
SMAD1-205ENST00000506626 GPCPD1Q9NPB8 672 aa8.34□□□□□ -1.07
SMAD1-205ENST00000506626 ALDH1A1P00352 501 aa8.33□□□□□ -1.08
SMAD1-205ENST00000506626 CLCN1P35523 988 aa8.33□□□□□ -1.08
SMAD1-205ENST00000506626 FAM217BQ9NTX9 383 aaPredicted RBP8.33□□□□□ -1.08
SMAD1-205ENST00000506626 SIAH2O43255 324 aa8.32□□□□□ -1.08
SMAD1-205ENST00000506626 HOXA2O43364 376 aa8.32□□□□□ -1.08
SMAD1-205ENST00000506626 USB1Q9BQ65 265 aaKnown RBP8.32□□□□□ -1.08
SMAD1-205ENST00000506626 CAPN5O15484 640 aaPredicted RBP8.3□□□□□ -1.08
SMAD1-205ENST00000506626 GSK3AP49840 483 aa8.3□□□□□ -1.08
SMAD1-205ENST00000506626 GUCA2AQ02747 115 aa8.29□□□□□ -1.08
SMAD1-205ENST00000506626 KRI1Q8N9T8 703 aaKnown RBP8.29□□□□□ -1.08
SMAD1-205ENST00000506626 VSIG8P0DPA2 414 aa8.28□□□□□ -1.08
SMAD1-205ENST00000506626 CCDC24Q8N4L8 307 aa8.28□□□□□ -1.08
SMAD1-205ENST00000506626 NUTM1Q86Y26 1132 aa8.27□□□□□ -1.09
SMAD1-205ENST00000506626 KCNMA1Q12791 1236 aa8.26□□□□□ -1.09
SMAD1-205ENST00000506626 BARGINQ6ZT62 677 aa8.26□□□□□ -1.09
SMAD1-205ENST00000506626 ZFP42Q96MM3 310 aa8.26□□□□□ -1.09
SMAD1-205ENST00000506626 ZMYND10O75800 440 aa8.25□□□□□ -1.09
SMAD1-205ENST00000506626 SYMPKQ92797 1274 aaKnown RBP8.25□□□□□ -1.09
SMAD1-205ENST00000506626 JUNDP17535 347 aa8.24□□□□□ -1.09
SMAD1-205ENST00000506626 WASF2Q9Y6W5 498 aa8.24□□□□□ -1.09
SMAD1-205ENST00000506626 SSTR3P32745 418 aaPredicted RBP8.23□□□□□ -1.09
SMAD1-205ENST00000506626 AMHR2Q16671 573 aa8.23□□□□□ -1.09
SMAD1-205ENST00000506626 PTCRAQ6ISU1 281 aaPredicted RBP8.23□□□□□ -1.09
SMAD1-205ENST00000506626 KCTD17Q8N5Z5 321 aa8.23□□□□□ -1.09
SMAD1-205ENST00000506626 EHBP1Q8NDI1 1231 aa8.23□□□□□ -1.09
SMAD1-205ENST00000506626 ZC3H15Q8WU90 426 aaKnown RBP8.23□□□□□ -1.09
SMAD1-205ENST00000506626 FDX1P10109 184 aa8.22□□□□□ -1.09
SMAD1-205ENST00000506626 TTLL12Q14166 644 aaPredicted RBP8.22□□□□□ -1.09
SMAD1-205ENST00000506626 RETREG3Q86VR2 466 aa8.22□□□□□ -1.09
SMAD1-205ENST00000506626 PCDHGC3Q9UN70 934 aa8.21□□□□□ -1.1
SMAD1-205ENST00000506626 SH3BP2P78314 561 aa8.2□□□□□ -1.1
SMAD1-205ENST00000506626 GIGYF2Q6Y7W6 1299 aaKnown RBP8.2□□□□□ -1.1
SMAD1-205ENST00000506626 SPIRE2Q8WWL2 714 aa8.2□□□□□ -1.1
SMAD1-205ENST00000506626 C6orf229H3BNL8 230 aa8.19□□□□□ -1.1
SMAD1-205ENST00000506626 NUDT12Q9BQG2 462 aa8.19□□□□□ -1.1
SMAD1-205ENST00000506626 MOXD2PA6NHM9 499 aa8.18□□□□□ -1.1
SMAD1-205ENST00000506626 MRPL14Q6P1L8 145 aaKnown RBP8.18□□□□□ -1.1
SMAD1-205ENST00000506626 TLL2Q9Y6L7 1015 aa8.18□□□□□ -1.1
SMAD1-205ENST00000506626 SOBPA7XYQ1 873 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms