RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 CDC42BPGQ6DT37 1551 aa26.33■■□□□ 1.8
PDLIM7-216ENST00000506537 SIRT1Q96EB6 747 aa26.32■■□□□ 1.8
PDLIM7-216ENST00000506537 TRPM1Q7Z4N2 1603 aa26.3■■□□□ 1.8
PDLIM7-216ENST00000506537 ARHGEF28Q8N1W1 1705 aaKnown RBP26.3■■□□□ 1.8
PDLIM7-216ENST00000506537 NBPF1Q3BBV0 1214 aa26.29■■□□□ 1.8
PDLIM7-216ENST00000506537 TRAK1Q9UPV9 953 aa26.29■■□□□ 1.8
PDLIM7-216ENST00000506537 TONSLQ96HA7 1378 aa26.29■■□□□ 1.8
PDLIM7-216ENST00000506537 PRAM1Q96QH2 718 aa26.28■■□□□ 1.8
PDLIM7-216ENST00000506537 C1orf167Q5SNV9 1468 aa26.25■■□□□ 1.79
PDLIM7-216ENST00000506537 NBPF8Q3BBV2 869 aa26.24■■□□□ 1.79
PDLIM7-216ENST00000506537 SAFB2Q14151 953 aaKnown RBP eCLIP26.23■■□□□ 1.79
PDLIM7-216ENST00000506537 BRINP3Q76B58 766 aa26.23■■□□□ 1.79
PDLIM7-216ENST00000506537 FMN2Q9NZ56 1722 aa26.22■■□□□ 1.79
PDLIM7-216ENST00000506537 CLSPNQ9HAW4 1339 aa26.22■■□□□ 1.79
PDLIM7-216ENST00000506537 ADGRB2O60241 1585 aa26.22■■□□□ 1.79
PDLIM7-216ENST00000506537 POGKQ9P215 609 aa26.21■■□□□ 1.79
PDLIM7-216ENST00000506537 AHDC1Q5TGY3 1603 aaPredicted RBP26.21■■□□□ 1.79
PDLIM7-216ENST00000506537 PHLPP1O60346 1717 aa26.2■■□□□ 1.79
PDLIM7-216ENST00000506537 COL16A1Q07092 1604 aaPredicted RBP26.18■■□□□ 1.78
PDLIM7-216ENST00000506537 NHSL1Q5SYE7 1610 aa26.18■■□□□ 1.78
PDLIM7-216ENST00000506537 ROCK2O75116 1388 aaKnown RBP26.15■■□□□ 1.78
PDLIM7-216ENST00000506537 RALGAPBQ86X10 1494 aa26.15■■□□□ 1.78
PDLIM7-216ENST00000506537 ORAI2Q96SN7 254 aa26.14■■□□□ 1.78
PDLIM7-216ENST00000506537 GPRASP1Q5JY77 1395 aa26.14■■□□□ 1.78
PDLIM7-216ENST00000506537 MINK1Q8N4C8 1332 aaPredicted RBP26.14■■□□□ 1.77
PDLIM7-216ENST00000506537 NUTM2FA1L443 756 aa26.13■■□□□ 1.77
PDLIM7-216ENST00000506537 CCER1Q8TC90 406 aaPredicted RBP26.13■■□□□ 1.77
PDLIM7-216ENST00000506537 HIRIP3Q9BW71 556 aaPredicted RBP26.13■■□□□ 1.77
PDLIM7-216ENST00000506537 USP32Q8NFA0 1604 aa26.12■■□□□ 1.77
PDLIM7-216ENST00000506537 RGPD8O14715 1765 aaPredicted RBP26.1■■□□□ 1.77
PDLIM7-216ENST00000506537 DDX17Q92841 729 aaKnown RBP26.1■■□□□ 1.77
PDLIM7-216ENST00000506537 MED1Q15648 1581 aaPredicted RBP26.09■■□□□ 1.77
PDLIM7-216ENST00000506537 QRICH2Q9H0J4 1663 aa26.09■■□□□ 1.77
PDLIM7-216ENST00000506537 TULP4Q9NRJ4 1543 aa26.06■■□□□ 1.76
PDLIM7-216ENST00000506537 ESCO1Q5FWF5 840 aa26.06■■□□□ 1.76
PDLIM7-216ENST00000506537 CENPJQ9HC77 1338 aaPredicted RBP26.06■■□□□ 1.76
PDLIM7-216ENST00000506537 ANKARQ7Z5J8 1434 aa26.05■■□□□ 1.76
PDLIM7-216ENST00000506537 WASLO00401 505 aaPredicted RBP26.05■■□□□ 1.76
PDLIM7-216ENST00000506537 KIF1AQ12756 1690 aa26.05■■□□□ 1.76
PDLIM7-216ENST00000506537 PRR36Q9H6K5 1346 aa26.03■■□□□ 1.76
PDLIM7-216ENST00000506537 TIMELESSQ9UNS1 1208 aa26.02■■□□□ 1.76
PDLIM7-216ENST00000506537 SHPRHQ149N8 1683 aa26.02■■□□□ 1.76
PDLIM7-216ENST00000506537 ATP7BP35670 1465 aa26.01■■□□□ 1.75
PDLIM7-216ENST00000506537 CARD11Q9BXL7 1154 aa26.01■■□□□ 1.75
PDLIM7-216ENST00000506537 JCADQ9P266 1359 aa26.01■■□□□ 1.75
PDLIM7-216ENST00000506537 PXDNQ92626 1479 aa26■■□□□ 1.75
PDLIM7-216ENST00000506537 EIF3AQ14152 1382 aaKnown RBP26■■□□□ 1.75
PDLIM7-216ENST00000506537 SOS2Q07890 1332 aaPredicted RBP25.99■■□□□ 1.75
PDLIM7-216ENST00000506537 NPHP3Q7Z494 1330 aa25.97■■□□□ 1.75
PDLIM7-216ENST00000506537 FOXO3O43524 673 aa25.97■■□□□ 1.75
PDLIM7-216ENST00000506537 TOPAZ1Q8N9V7 1692 aa25.96■■□□□ 1.75
PDLIM7-216ENST00000506537 CDK19Q9BWU1 502 aa25.96■■□□□ 1.75
PDLIM7-216ENST00000506537 PHF8Q9UPP1 1060 aa25.96■■□□□ 1.75
PDLIM7-216ENST00000506537 ITSN1Q15811 1721 aa25.95■■□□□ 1.74
PDLIM7-216ENST00000506537 XPCQ01831 940 aaPredicted RBP25.94■■□□□ 1.74
PDLIM7-216ENST00000506537 LRRC59Q96AG4 307 aaKnown RBP25.93■■□□□ 1.74
PDLIM7-216ENST00000506537 PHF23Q9BUL5 403 aaPredicted RBP25.93■■□□□ 1.74
PDLIM7-216ENST00000506537 PNPLA6Q8IY17 1366 aa25.93■■□□□ 1.74
PDLIM7-216ENST00000506537 NUDT16Q96DE0 195 aaKnown RBP25.92■■□□□ 1.74
PDLIM7-216ENST00000506537 LRP6O75581 1613 aa25.92■■□□□ 1.74
PDLIM7-216ENST00000506537 PMFBP1Q8TBY8 1022 aa25.91■■□□□ 1.74
PDLIM7-216ENST00000506537 SBNO2Q9Y2G9 1366 aa25.9■■□□□ 1.74
PDLIM7-216ENST00000506537 CABP2Q9NPB3 220 aa25.88■■□□□ 1.73
PDLIM7-216ENST00000506537 SPATA31A6Q5VVP1 1343 aa25.88■■□□□ 1.73
PDLIM7-216ENST00000506537 COL22A1Q8NFW1 1626 aaPredicted RBP25.87■■□□□ 1.73
PDLIM7-216ENST00000506537 TRPM3Q9HCF6 1732 aaPredicted RBP25.86■■□□□ 1.73
PDLIM7-216ENST00000506537 SRPK2P78362 688 aaKnown RBP25.86■■□□□ 1.73
PDLIM7-216ENST00000506537 KRT28Q7Z3Y7 464 aa25.86■■□□□ 1.73
PDLIM7-216ENST00000506537 EVC2Q86UK5 1308 aa25.85■■□□□ 1.73
PDLIM7-216ENST00000506537 CCDC61Q9Y6R9 512 aa25.84■■□□□ 1.73
PDLIM7-216ENST00000506537 USP47Q96K76 1375 aa25.83■■□□□ 1.73
PDLIM7-216ENST00000506537 SPATA31A3Q5VYP0 1347 aa25.83■■□□□ 1.73
PDLIM7-216ENST00000506537 TNS3Q68CZ2 1445 aa25.82■■□□□ 1.72
PDLIM7-216ENST00000506537 PPIP5K1Q6PFW1 1433 aa25.82■■□□□ 1.72
PDLIM7-216ENST00000506537 SBNO1A3KN83 1393 aa25.82■■□□□ 1.72
PDLIM7-216ENST00000506537 ST20-MTHFSA0A0A6YYL1 179 aa25.81■■□□□ 1.72
PDLIM7-216ENST00000506537 POLR3AO14802 1390 aaPredicted RBP25.81■■□□□ 1.72
PDLIM7-216ENST00000506537 PSME1Q06323 249 aa25.8■■□□□ 1.72
PDLIM7-216ENST00000506537 TESK2Q96S53 571 aa25.8■■□□□ 1.72
PDLIM7-216ENST00000506537 PLEKHG3A1L390 1219 aa25.79■■□□□ 1.72
PDLIM7-216ENST00000506537 NGDNQ8NEJ9 315 aaKnown RBP25.79■■□□□ 1.72
PDLIM7-216ENST00000506537 ALS2Q96Q42 1657 aa25.79■■□□□ 1.72
PDLIM7-216ENST00000506537 NUTM2BA6NNL0 878 aaPredicted RBP25.78■■□□□ 1.72
PDLIM7-216ENST00000506537 NUTM2EB1AL46 878 aaPredicted RBP25.78■■□□□ 1.72
PDLIM7-216ENST00000506537 NUTM2AQ8IVF1 878 aaPredicted RBP25.78■■□□□ 1.72
PDLIM7-216ENST00000506537 ACEP12821 1306 aa25.77■■□□□ 1.72
PDLIM7-216ENST00000506537 CABP1Q9NZU7 370 aa25.74■■□□□ 1.71
PDLIM7-216ENST00000506537 RGS17Q9UGC6 210 aaPredicted RBP25.74■■□□□ 1.71
PDLIM7-216ENST00000506537 ATAD2Q6PL18 1390 aa25.73■■□□□ 1.71
PDLIM7-216ENST00000506537 ABCA3Q99758 1704 aa25.73■■□□□ 1.71
PDLIM7-216ENST00000506537 ARHGEF10O15013 1369 aa25.71■■□□□ 1.71
PDLIM7-216ENST00000506537 MEX3CQ5U5Q3 659 aaKnown RBP25.71■■□□□ 1.71
PDLIM7-216ENST00000506537 AKAP12Q02952 1782 aa25.69■■□□□ 1.7
PDLIM7-216ENST00000506537 CRYBG1Q9Y4K1 1723 aa25.68■■□□□ 1.7
PDLIM7-216ENST00000506537 LMOD2Q6P5Q4 547 aa25.68■■□□□ 1.7
PDLIM7-216ENST00000506537 MARF1Q9Y4F3 1742 aaKnown RBP25.68■■□□□ 1.7
PDLIM7-216ENST00000506537 ADAMTS2O95450 1211 aa25.67■■□□□ 1.7
PDLIM7-216ENST00000506537 USP6P35125 1406 aa25.67■■□□□ 1.7
PDLIM7-216ENST00000506537 PAK3O75914 559 aaPredicted RBP25.66■■□□□ 1.7
PDLIM7-216ENST00000506537 CABLES1Q8TDN4 633 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms