RNA–Protein interactions for RNA: ENST00000506320.1

SIKE1-209, Transcript of suppressor of IKBKE 1, humanhuman

TSL 2

Gene SIKE1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIKE1-209ENST00000506320 FMN2Q9NZ56 1722 aa29.4■■■□□ 2.3
SIKE1-209ENST00000506320 DHX57Q6P158 1386 aaKnown RBP29.39■■■□□ 2.3
SIKE1-209ENST00000506320 SIRT1Q96EB6 747 aa29.39■■■□□ 2.3
SIKE1-209ENST00000506320 STAC3Q96MF2 364 aa29.38■■■□□ 2.29
SIKE1-209ENST00000506320 MEX3CQ5U5Q3 659 aaKnown RBP29.37■■■□□ 2.29
SIKE1-209ENST00000506320 DLC1Q96QB1 1528 aa29.36■■■□□ 2.29
SIKE1-209ENST00000506320 WAPLQ7Z5K2 1190 aa29.35■■■□□ 2.29
SIKE1-209ENST00000506320 ORAI2Q96SN7 254 aa29.35■■■□□ 2.29
SIKE1-209ENST00000506320 PNPLA6Q8IY17 1366 aa29.35■■■□□ 2.29
SIKE1-209ENST00000506320 CFAP70Q5T0N1 1121 aa29.34■■■□□ 2.29
SIKE1-209ENST00000506320 POTEAQ6S8J7 498 aa29.34■■■□□ 2.29
SIKE1-209ENST00000506320 SOS2Q07890 1332 aaPredicted RBP29.34■■■□□ 2.29
SIKE1-209ENST00000506320 PLEKHH1Q9ULM0 1364 aa29.34■■■□□ 2.29
SIKE1-209ENST00000506320 ADGRB1O14514 1584 aa29.33■■■□□ 2.29
SIKE1-209ENST00000506320 KIF1AQ12756 1690 aa29.33■■■□□ 2.29
SIKE1-209ENST00000506320 DDX17Q92841 729 aaKnown RBP29.32■■■□□ 2.28
SIKE1-209ENST00000506320 NPHP3Q7Z494 1330 aa29.3■■■□□ 2.28
SIKE1-209ENST00000506320 ZNF772Q68DY9 489 aaPredicted RBP29.3■■■□□ 2.28
SIKE1-209ENST00000506320 COL22A1Q8NFW1 1626 aaPredicted RBP29.3■■■□□ 2.28
SIKE1-209ENST00000506320 ESCO1Q5FWF5 840 aa29.28■■■□□ 2.28
SIKE1-209ENST00000506320 DCAF11Q8TEB1 546 aa29.28■■■□□ 2.28
SIKE1-209ENST00000506320 ADGRB2O60241 1585 aa29.27■■■□□ 2.28
SIKE1-209ENST00000506320 NUTM2BA6NNL0 878 aaPredicted RBP29.27■■■□□ 2.28
SIKE1-209ENST00000506320 NUTM2EB1AL46 878 aaPredicted RBP29.27■■■□□ 2.28
SIKE1-209ENST00000506320 NUTM2AQ8IVF1 878 aaPredicted RBP29.27■■■□□ 2.28
SIKE1-209ENST00000506320 PXDNQ92626 1479 aa29.26■■■□□ 2.27
SIKE1-209ENST00000506320 RGPD8O14715 1765 aaPredicted RBP29.22■■■□□ 2.27
SIKE1-209ENST00000506320 KDM2AQ9Y2K7 1162 aa29.22■■■□□ 2.27
SIKE1-209ENST00000506320 KIAA1210Q9ULL0 1709 aa29.21■■■□□ 2.27
SIKE1-209ENST00000506320 PRAM1Q96QH2 718 aa29.21■■■□□ 2.27
SIKE1-209ENST00000506320 POGKQ9P215 609 aa29.18■■■□□ 2.26
SIKE1-209ENST00000506320 ARHGEF28Q8N1W1 1705 aaKnown RBP29.17■■■□□ 2.26
SIKE1-209ENST00000506320 NUTM2FA1L443 756 aa29.17■■■□□ 2.26
SIKE1-209ENST00000506320 FOXO3O43524 673 aa29.17■■■□□ 2.26
SIKE1-209ENST00000506320 AFF2P51816 1311 aa29.17■■■□□ 2.26
SIKE1-209ENST00000506320 ANKARQ7Z5J8 1434 aa29.16■■■□□ 2.26
SIKE1-209ENST00000506320 MARF1Q9Y4F3 1742 aaKnown RBP29.16■■■□□ 2.26
SIKE1-209ENST00000506320 USP32Q8NFA0 1604 aa29.14■■■□□ 2.26
SIKE1-209ENST00000506320 CDK12Q9NYV4 1490 aaPredicted RBP29.14■■■□□ 2.26
SIKE1-209ENST00000506320 EIF3AQ14152 1382 aaKnown RBP29.13■■■□□ 2.25
SIKE1-209ENST00000506320 SAFB2Q14151 953 aaKnown RBP eCLIP29.12■■■□□ 2.25
SIKE1-209ENST00000506320 C8orf37Q96NL8 207 aa29.12■■■□□ 2.25
SIKE1-209ENST00000506320 TRAK1Q9UPV9 953 aa29.12■■■□□ 2.25
SIKE1-209ENST00000506320 RXRBP28702 533 aa29.09■■■□□ 2.25
SIKE1-209ENST00000506320 PHF8Q9UPP1 1060 aa29.09■■■□□ 2.25
SIKE1-209ENST00000506320 TULP4Q9NRJ4 1543 aa29.09■■■□□ 2.25
SIKE1-209ENST00000506320 ADAMTS2O95450 1211 aa29.08■■■□□ 2.25
SIKE1-209ENST00000506320 XPCQ01831 940 aaPredicted RBP29.08■■■□□ 2.25
SIKE1-209ENST00000506320 NGLY1Q96IV0 654 aa29.07■■■□□ 2.24
SIKE1-209ENST00000506320 ITSN1Q15811 1721 aa29.06■■■□□ 2.24
SIKE1-209ENST00000506320 SPATA31A3Q5VYP0 1347 aa29.06■■■□□ 2.24
SIKE1-209ENST00000506320 TNS3Q68CZ2 1445 aa29.04■■■□□ 2.24
SIKE1-209ENST00000506320 PSME1Q06323 249 aa29.04■■■□□ 2.24
SIKE1-209ENST00000506320 KRT28Q7Z3Y7 464 aa29.03■■■□□ 2.24
SIKE1-209ENST00000506320 MINK1Q8N4C8 1332 aaPredicted RBP29.02■■■□□ 2.24
SIKE1-209ENST00000506320 SBNO1A3KN83 1393 aa29.01■■■□□ 2.24
SIKE1-209ENST00000506320 FNBP4Q8N3X1 1017 aaPredicted RBP29■■■□□ 2.23
SIKE1-209ENST00000506320 HIRIP3Q9BW71 556 aaPredicted RBP29■■■□□ 2.23
SIKE1-209ENST00000506320 QTRT2Q9H974 415 aaKnown RBP29■■■□□ 2.23
SIKE1-209ENST00000506320 TNKS1BP1Q9C0C2 1729 aaKnown RBP29■■■□□ 2.23
SIKE1-209ENST00000506320 WASLO00401 505 aaPredicted RBP28.99■■■□□ 2.23
SIKE1-209ENST00000506320 RBM6P78332 1123 aaKnown RBP28.99■■■□□ 2.23
SIKE1-209ENST00000506320 ABCA3Q99758 1704 aa28.99■■■□□ 2.23
SIKE1-209ENST00000506320 TRPM3Q9HCF6 1732 aaPredicted RBP28.98■■■□□ 2.23
SIKE1-209ENST00000506320 ARHGEF10O15013 1369 aa28.98■■■□□ 2.23
SIKE1-209ENST00000506320 USP21Q9UK80 565 aa28.97■■■□□ 2.23
SIKE1-209ENST00000506320 ALS2Q96Q42 1657 aa28.94■■■□□ 2.22
SIKE1-209ENST00000506320 ATP7BP35670 1465 aa28.94■■■□□ 2.22
SIKE1-209ENST00000506320 TRPC5Q9UL62 973 aaPredicted RBP28.94■■■□□ 2.22
SIKE1-209ENST00000506320 RGS12O14924 1447 aa28.94■■■□□ 2.22
SIKE1-209ENST00000506320 PRR36Q9H6K5 1346 aa28.94■■■□□ 2.22
SIKE1-209ENST00000506320 GPRASP1Q5JY77 1395 aa28.93■■■□□ 2.22
SIKE1-209ENST00000506320 ATRNO75882 1429 aa28.93■■■□□ 2.22
SIKE1-209ENST00000506320 TOPAZ1Q8N9V7 1692 aa28.93■■■□□ 2.22
SIKE1-209ENST00000506320 PMFBP1Q8TBY8 1022 aa28.92■■■□□ 2.22
SIKE1-209ENST00000506320 TRPM1Q7Z4N2 1603 aa28.91■■■□□ 2.22
SIKE1-209ENST00000506320 BCL9LQ86UU0 1499 aa28.9■■■□□ 2.22
SIKE1-209ENST00000506320 NWD2Q9ULI1 1742 aa28.89■■■□□ 2.21
SIKE1-209ENST00000506320 L3MBTL2Q969R5 705 aa28.88■■■□□ 2.21
SIKE1-209ENST00000506320 SLIT2O94813 1529 aa28.88■■■□□ 2.21
SIKE1-209ENST00000506320 PLCH1Q4KWH8 1693 aa28.87■■■□□ 2.21
SIKE1-209ENST00000506320 QRICH2Q9H0J4 1663 aa28.87■■■□□ 2.21
SIKE1-209ENST00000506320 HAP1P54257 671 aaPredicted RBP28.87■■■□□ 2.21
SIKE1-209ENST00000506320 NBPF1Q3BBV0 1214 aa28.87■■■□□ 2.21
SIKE1-209ENST00000506320 LMOD2Q6P5Q4 547 aa28.84■■■□□ 2.21
SIKE1-209ENST00000506320 NUDT16Q96DE0 195 aaKnown RBP28.84■■■□□ 2.21
SIKE1-209ENST00000506320 CRYBG1Q9Y4K1 1723 aa28.83■■■□□ 2.21
SIKE1-209ENST00000506320 NGDNQ8NEJ9 315 aaKnown RBP28.83■■■□□ 2.21
SIKE1-209ENST00000506320 SIN3AQ96ST3 1273 aa28.83■■■□□ 2.21
SIKE1-209ENST00000506320 CDK19Q9BWU1 502 aa28.82■■■□□ 2.2
SIKE1-209ENST00000506320 CENPJQ9HC77 1338 aaPredicted RBP28.82■■■□□ 2.2
SIKE1-209ENST00000506320 UPF1Q92900 1129 aaKnown RBP eCLIP28.81■■■□□ 2.2
SIKE1-209ENST00000506320 UNC5CLQ8IV45 518 aa28.79■■■□□ 2.2
SIKE1-209ENST00000506320 POLR3AO14802 1390 aaPredicted RBP28.78■■■□□ 2.2
SIKE1-209ENST00000506320 NEUROD1Q13562 356 aa28.78■■■□□ 2.2
SIKE1-209ENST00000506320 CABLES1Q8TDN4 633 aa28.78■■■□□ 2.2
SIKE1-209ENST00000506320 CCDC61Q9Y6R9 512 aa28.78■■■□□ 2.2
SIKE1-209ENST00000506320 COL14A1Q05707 1796 aaKnown RBP28.76■■■□□ 2.19
SIKE1-209ENST00000506320 GJD4Q96KN9 370 aaPredicted RBP28.76■■■□□ 2.19
SIKE1-209ENST00000506320 GLI3P10071 1580 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms