RNA–Protein interactions for RNA: ENST00000506188.5

SNHG4-203, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 801 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-203ENST00000506188 PRAM1Q96QH2 718 aa20.25■□□□□ 0.83
SNHG4-203ENST00000506188 AHDC1Q5TGY3 1603 aaPredicted RBP20.24■□□□□ 0.83
SNHG4-203ENST00000506188 TRAK1Q9UPV9 953 aa20.24■□□□□ 0.83
SNHG4-203ENST00000506188 NPHP3Q7Z494 1330 aa20.24■□□□□ 0.83
SNHG4-203ENST00000506188 NUTM2BA6NNL0 878 aaPredicted RBP20.23■□□□□ 0.83
SNHG4-203ENST00000506188 NUTM2EB1AL46 878 aaPredicted RBP20.23■□□□□ 0.83
SNHG4-203ENST00000506188 SAFB2Q14151 953 aaKnown RBP eCLIP20.23■□□□□ 0.83
SNHG4-203ENST00000506188 NUTM2AQ8IVF1 878 aaPredicted RBP20.23■□□□□ 0.83
SNHG4-203ENST00000506188 SETD1AO15047 1707 aaKnown RBP20.22■□□□□ 0.83
SNHG4-203ENST00000506188 NUTM2FA1L443 756 aa20.22■□□□□ 0.83
SNHG4-203ENST00000506188 IFT172Q9UG01 1749 aa20.22■□□□□ 0.83
SNHG4-203ENST00000506188 LAMC1P11047 1609 aa20.21■□□□□ 0.83
SNHG4-203ENST00000506188 DDX17Q92841 729 aaKnown RBP20.2■□□□□ 0.82
SNHG4-203ENST00000506188 PLEKHH1Q9ULM0 1364 aa20.2■□□□□ 0.82
SNHG4-203ENST00000506188 ZNF772Q68DY9 489 aaPredicted RBP20.19■□□□□ 0.82
SNHG4-203ENST00000506188 NALCNQ8IZF0 1738 aa20.19■□□□□ 0.82
SNHG4-203ENST00000506188 COL16A1Q07092 1604 aaPredicted RBP20.18■□□□□ 0.82
SNHG4-203ENST00000506188 FOXO3O43524 673 aa20.18■□□□□ 0.82
SNHG4-203ENST00000506188 CDC42BPGQ6DT37 1551 aa20.17■□□□□ 0.82
SNHG4-203ENST00000506188 NEUROD1Q13562 356 aa20.17■□□□□ 0.82
SNHG4-203ENST00000506188 SOS2Q07890 1332 aaPredicted RBP20.17■□□□□ 0.82
SNHG4-203ENST00000506188 PSME1Q06323 249 aa20.16■□□□□ 0.82
SNHG4-203ENST00000506188 EIF3AQ14152 1382 aaKnown RBP20.16■□□□□ 0.82
SNHG4-203ENST00000506188 RGS17Q9UGC6 210 aaPredicted RBP20.15■□□□□ 0.82
SNHG4-203ENST00000506188 PHF8Q9UPP1 1060 aa20.14■□□□□ 0.81
SNHG4-203ENST00000506188 DLC1Q96QB1 1528 aa20.13■□□□□ 0.81
SNHG4-203ENST00000506188 PNPLA6Q8IY17 1366 aa20.12■□□□□ 0.81
SNHG4-203ENST00000506188 MINK1Q8N4C8 1332 aaPredicted RBP20.12■□□□□ 0.81
SNHG4-203ENST00000506188 KNDC1Q76NI1 1749 aa20.11■□□□□ 0.81
SNHG4-203ENST00000506188 L3MBTL2Q969R5 705 aa20.11■□□□□ 0.81
SNHG4-203ENST00000506188 HIRIP3Q9BW71 556 aaPredicted RBP20.11■□□□□ 0.81
SNHG4-203ENST00000506188 POTEAQ6S8J7 498 aa20.1■□□□□ 0.81
SNHG4-203ENST00000506188 KRT28Q7Z3Y7 464 aa20.1■□□□□ 0.81
SNHG4-203ENST00000506188 NGLY1Q96IV0 654 aa20.1■□□□□ 0.81
SNHG4-203ENST00000506188 C8orf37Q96NL8 207 aa20.1■□□□□ 0.81
SNHG4-203ENST00000506188 SIN3AQ96ST3 1273 aa20.1■□□□□ 0.81
SNHG4-203ENST00000506188 WASLO00401 505 aaPredicted RBP20.09■□□□□ 0.81
SNHG4-203ENST00000506188 ADAMTS2O95450 1211 aa20.09■□□□□ 0.81
SNHG4-203ENST00000506188 XPCQ01831 940 aaPredicted RBP20.09■□□□□ 0.81
SNHG4-203ENST00000506188 ADGRB1O14514 1584 aa20.08■□□□□ 0.81
SNHG4-203ENST00000506188 HAP1P54257 671 aaPredicted RBP20.08■□□□□ 0.81
SNHG4-203ENST00000506188 NHSL1Q5SYE7 1610 aa20.08■□□□□ 0.8
SNHG4-203ENST00000506188 SHPRHQ149N8 1683 aa20.07■□□□□ 0.8
SNHG4-203ENST00000506188 ANKARQ7Z5J8 1434 aa20.07■□□□□ 0.8
SNHG4-203ENST00000506188 LMOD2Q6P5Q4 547 aa20.06■□□□□ 0.8
SNHG4-203ENST00000506188 AFF2P51816 1311 aa20.05■□□□□ 0.8
SNHG4-203ENST00000506188 RXRBP28702 533 aa20.05■□□□□ 0.8
SNHG4-203ENST00000506188 NGDNQ8NEJ9 315 aaKnown RBP20.05■□□□□ 0.8
SNHG4-203ENST00000506188 GPRASP1Q5JY77 1395 aa20.05■□□□□ 0.8
SNHG4-203ENST00000506188 LRP6O75581 1613 aa20.05■□□□□ 0.8
SNHG4-203ENST00000506188 NBPF1Q3BBV0 1214 aa20.04■□□□□ 0.8
SNHG4-203ENST00000506188 PMFBP1Q8TBY8 1022 aa20.04■□□□□ 0.8
SNHG4-203ENST00000506188 SPATA31A3Q5VYP0 1347 aa20.02■□□□□ 0.8
SNHG4-203ENST00000506188 TONSLQ96HA7 1378 aa20.01■□□□□ 0.79
SNHG4-203ENST00000506188 CDK19Q9BWU1 502 aa20.01■□□□□ 0.79
SNHG4-203ENST00000506188 QTRT2Q9H974 415 aaKnown RBP20.01■□□□□ 0.79
SNHG4-203ENST00000506188 CENPJQ9HC77 1338 aaPredicted RBP20.01■□□□□ 0.79
SNHG4-203ENST00000506188 PXDNQ92626 1479 aa20■□□□□ 0.79
SNHG4-203ENST00000506188 NUDT16Q96DE0 195 aaKnown RBP20■□□□□ 0.79
SNHG4-203ENST00000506188 SBNO1A3KN83 1393 aa19.99■□□□□ 0.79
SNHG4-203ENST00000506188 ARHGEF10O15013 1369 aa19.99■□□□□ 0.79
SNHG4-203ENST00000506188 SRPK2P78362 688 aaKnown RBP19.99■□□□□ 0.79
SNHG4-203ENST00000506188 USP21Q9UK80 565 aa19.99■□□□□ 0.79
SNHG4-203ENST00000506188 FMN2Q9NZ56 1722 aa19.99■□□□□ 0.79
SNHG4-203ENST00000506188 KIF1AQ12756 1690 aa19.98■□□□□ 0.79
SNHG4-203ENST00000506188 CCDC61Q9Y6R9 512 aa19.98■□□□□ 0.79
SNHG4-203ENST00000506188 ROCK2O75116 1388 aaKnown RBP19.97■□□□□ 0.79
SNHG4-203ENST00000506188 PAK3O75914 559 aaPredicted RBP19.97■□□□□ 0.79
SNHG4-203ENST00000506188 RBM6P78332 1123 aaKnown RBP19.97■□□□□ 0.79
SNHG4-203ENST00000506188 ADGRB2O60241 1585 aa19.96■□□□□ 0.79
SNHG4-203ENST00000506188 TRPC5Q9UL62 973 aaPredicted RBP19.96■□□□□ 0.79
SNHG4-203ENST00000506188 TNS3Q68CZ2 1445 aa19.95■□□□□ 0.78
SNHG4-203ENST00000506188 FNBP4Q8N3X1 1017 aaPredicted RBP19.95■□□□□ 0.78
SNHG4-203ENST00000506188 TULP4Q9NRJ4 1543 aa19.95■□□□□ 0.78
SNHG4-203ENST00000506188 KIAA1210Q9ULL0 1709 aa19.94■□□□□ 0.78
SNHG4-203ENST00000506188 PLEKHG5O94827 1062 aa19.94■□□□□ 0.78
SNHG4-203ENST00000506188 PRR36Q9H6K5 1346 aa19.94■□□□□ 0.78
SNHG4-203ENST00000506188 EVC2Q86UK5 1308 aa19.92■□□□□ 0.78
SNHG4-203ENST00000506188 CARD11Q9BXL7 1154 aa19.91■□□□□ 0.78
SNHG4-203ENST00000506188 PLEKHG3A1L390 1219 aa19.89■□□□□ 0.77
SNHG4-203ENST00000506188 NBPF8Q3BBV2 869 aa19.88■□□□□ 0.77
SNHG4-203ENST00000506188 CABLES1Q8TDN4 633 aa19.88■□□□□ 0.77
SNHG4-203ENST00000506188 COL22A1Q8NFW1 1626 aaPredicted RBP19.87■□□□□ 0.77
SNHG4-203ENST00000506188 ACEP12821 1306 aa19.87■□□□□ 0.77
SNHG4-203ENST00000506188 UNC5CLQ8IV45 518 aa19.87■□□□□ 0.77
SNHG4-203ENST00000506188 CABP2Q9NPB3 220 aa19.87■□□□□ 0.77
SNHG4-203ENST00000506188 SLC24A1O60721 1099 aa19.86■□□□□ 0.77
SNHG4-203ENST00000506188 PCGF6Q9BYE7 350 aa19.86■□□□□ 0.77
SNHG4-203ENST00000506188 CDK12Q9NYV4 1490 aaPredicted RBP19.86■□□□□ 0.77
SNHG4-203ENST00000506188 ARHGEF28Q8N1W1 1705 aaKnown RBP19.85■□□□□ 0.77
SNHG4-203ENST00000506188 ATP7BP35670 1465 aa19.85■□□□□ 0.77
SNHG4-203ENST00000506188 CCDC9Q9Y3X0 531 aaKnown RBP19.84■□□□□ 0.77
SNHG4-203ENST00000506188 ABTB2Q8N961 1025 aa19.83■□□□□ 0.77
SNHG4-203ENST00000506188 GJD4Q96KN9 370 aaPredicted RBP19.83■□□□□ 0.77
SNHG4-203ENST00000506188 POLR3AO14802 1390 aaPredicted RBP19.83■□□□□ 0.76
SNHG4-203ENST00000506188 CABP1Q9NZU7 370 aa19.82■□□□□ 0.76
SNHG4-203ENST00000506188 TIMELESSQ9UNS1 1208 aa19.82■□□□□ 0.76
SNHG4-203ENST00000506188 PPIP5K1Q6PFW1 1433 aa19.82■□□□□ 0.76
SNHG4-203ENST00000506188 BRD4O60885 1362 aaPredicted RBP19.82■□□□□ 0.76
SNHG4-203ENST00000506188 USP32Q8NFA0 1604 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms