RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 PXDNQ92626 1479 aa5.73□□□□□ -1.49
TCOF1-208ENST00000506063 FYCO1Q9BQS8 1478 aa5.73□□□□□ -1.49
TCOF1-208ENST00000506063 GIGYF1O75420 1035 aaPredicted RBP5.73□□□□□ -1.49
TCOF1-208ENST00000506063 LMTK2Q8IWU2 1503 aa5.73□□□□□ -1.49
TCOF1-208ENST00000506063 ADGRL3Q9HAR2 1447 aa5.73□□□□□ -1.49
TCOF1-208ENST00000506063 RIMS2Q9UQ26 1411 aa5.73□□□□□ -1.49
TCOF1-208ENST00000506063 CROCC2H7BZ55 1655 aa5.72□□□□□ -1.49
TCOF1-208ENST00000506063 ADGRB2O60241 1585 aa5.72□□□□□ -1.49
TCOF1-208ENST00000506063 ABCA3Q99758 1704 aa5.72□□□□□ -1.49
TCOF1-208ENST00000506063 KCNQ2O43526 872 aa5.72□□□□□ -1.49
TCOF1-208ENST00000506063 SPON1Q9HCB6 807 aa5.72□□□□□ -1.49
TCOF1-208ENST00000506063 DCAF8L1A6NGE4 600 aa5.71□□□□□ -1.5
TCOF1-208ENST00000506063 PPP1R15AO75807 674 aaPredicted RBP5.71□□□□□ -1.5
TCOF1-208ENST00000506063 PRELPP51888 382 aa5.71□□□□□ -1.5
TCOF1-208ENST00000506063 COL13A1Q5TAT6 717 aaPredicted RBP5.71□□□□□ -1.5
TCOF1-208ENST00000506063 EHMT2Q96KQ7 1210 aa5.71□□□□□ -1.5
TCOF1-208ENST00000506063 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.71□□□□□ -1.53e-8■■■■■ 27.6
TCOF1-208ENST00000506063 STAG3Q9UJ98 1225 aa5.71□□□□□ -1.5
TCOF1-208ENST00000506063 AMOTL2Q9Y2J4 779 aa5.71□□□□□ -1.5
TCOF1-208ENST00000506063 PARD3Q8TEW0 1356 aa5.7□□□□□ -1.5
TCOF1-208ENST00000506063 VPS72Q15906 364 aa5.7□□□□□ -1.5
TCOF1-208ENST00000506063 FAM182BQ5T319 152 aa5.7□□□□□ -1.5
TCOF1-208ENST00000506063 PPP1R1BQ9UD71 204 aaPredicted RBP5.7□□□□□ -1.5
TCOF1-208ENST00000506063 EEA1Q15075 1411 aa5.7□□□□□ -1.5
TCOF1-208ENST00000506063 DUOX2Q9NRD8 1548 aa5.69□□□□□ -1.5
TCOF1-208ENST00000506063 CAPN15O75808 1086 aa5.69□□□□□ -1.5
TCOF1-208ENST00000506063 PTGER2P43116 358 aa5.69□□□□□ -1.5
TCOF1-208ENST00000506063 ORAI2Q96SN7 254 aa5.69□□□□□ -1.5
TCOF1-208ENST00000506063 CEP162Q5TB80 1403 aa5.68□□□□□ -1.5
TCOF1-208ENST00000506063 HSPA6P17066 643 aa5.68□□□□□ -1.5
TCOF1-208ENST00000506063 RSPH4AQ5TD94 716 aa5.68□□□□□ -1.5
TCOF1-208ENST00000506063 BCANQ96GW7 911 aa5.68□□□□□ -1.5
TCOF1-208ENST00000506063 PDGFDQ9GZP0 370 aaPredicted RBP5.68□□□□□ -1.5
TCOF1-208ENST00000506063 ADGRL2O95490 1459 aa5.68□□□□□ -1.5
TCOF1-208ENST00000506063 RPRD2Q5VT52 1461 aaKnown RBP5.68□□□□□ -1.5
TCOF1-208ENST00000506063 RGPD3A6NKT7 1758 aaPredicted RBP5.67□□□□□ -1.5
TCOF1-208ENST00000506063 RGPD4Q7Z3J3 1758 aa5.67□□□□□ -1.5
TCOF1-208ENST00000506063 DNAJC5GQ8N7S2 189 aa5.67□□□□□ -1.5
TCOF1-208ENST00000506063 SYT17Q9BSW7 474 aa5.67□□□□□ -1.5
TCOF1-208ENST00000506063 NEXMIFQ5QGS0 1516 aa5.67□□□□□ -1.5
TCOF1-208ENST00000506063 DLC1Q96QB1 1528 aa5.67□□□□□ -1.5
TCOF1-208ENST00000506063 SGIP1Q9BQI5 828 aa5.66□□□□□ -1.5
TCOF1-208ENST00000506063 SLC52A1Q9NWF4 448 aa5.66□□□□□ -1.5
TCOF1-208ENST00000506063 METP08581 1390 aa5.66□□□□□ -1.5
TCOF1-208ENST00000506063 ERBINQ96RT1 1412 aa5.65□□□□□ -1.5
TCOF1-208ENST00000506063 SBF2Q86WG5 1849 aa5.65□□□□□ -1.5
TCOF1-208ENST00000506063 TRIM37O94972 964 aa5.65□□□□□ -1.5
TCOF1-208ENST00000506063 FHDC1Q9C0D6 1143 aaPredicted RBP5.65□□□□□ -1.5
TCOF1-208ENST00000506063 IQGAP3Q86VI3 1631 aa5.64□□□□□ -1.51
TCOF1-208ENST00000506063 FAM98CQ17RN3 349 aaKnown RBP5.64□□□□□ -1.51
TCOF1-208ENST00000506063 ANO8Q9HCE9 1232 aaPredicted RBP5.64□□□□□ -1.51
TCOF1-208ENST00000506063 MAP3K5Q99683 1374 aa5.64□□□□□ -1.51
TCOF1-208ENST00000506063 COL24A1Q17RW2 1714 aa5.63□□□□□ -1.51
TCOF1-208ENST00000506063 WDR90Q96KV7 1748 aa5.63□□□□□ -1.51
TCOF1-208ENST00000506063 TSPY4P0CV99 314 aa5.63□□□□□ -1.51
TCOF1-208ENST00000506063 TSPY10P0CW01 314 aa5.63□□□□□ -1.51
TCOF1-208ENST00000506063 XPCQ01831 940 aaPredicted RBP5.63□□□□□ -1.51
TCOF1-208ENST00000506063 NPHP3Q7Z494 1330 aa5.63□□□□□ -1.51
TCOF1-208ENST00000506063 PRAG1Q86YV5 1406 aa5.63□□□□□ -1.51
TCOF1-208ENST00000506063 FAM83GA6ND36 823 aa5.62□□□□□ -1.51
TCOF1-208ENST00000506063 APBA3O96018 575 aa5.62□□□□□ -1.51
TCOF1-208ENST00000506063 TNS4Q8IZW8 715 aa5.62□□□□□ -1.51
TCOF1-208ENST00000506063 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.62□□□□□ -1.51
TCOF1-208ENST00000506063 SPATA31A3Q5VYP0 1347 aa5.62□□□□□ -1.51
TCOF1-208ENST00000506063 ATP10DQ9P241 1426 aa5.62□□□□□ -1.51
TCOF1-208ENST00000506063 CDC42BPGQ6DT37 1551 aa5.62□□□□□ -1.51
TCOF1-208ENST00000506063 PEAK1Q9H792 1746 aa5.62□□□□□ -1.51
TCOF1-208ENST00000506063 CRYBG1Q9Y4K1 1723 aa5.62□□□□□ -1.51
TCOF1-208ENST00000506063 ABCC5O15440 1437 aa5.61□□□□□ -1.51
TCOF1-208ENST00000506063 ADCY9O60503 1353 aa5.61□□□□□ -1.51
TCOF1-208ENST00000506063 ZBTB7AO95365 584 aa5.61□□□□□ -1.51
TCOF1-208ENST00000506063 NBPF8Q3BBV2 869 aa5.61□□□□□ -1.51
TCOF1-208ENST00000506063 NBPF14Q5TI25 921 aa5.61□□□□□ -1.51
TCOF1-208ENST00000506063 ROBO2Q9HCK4 1378 aa5.61□□□□□ -1.51
TCOF1-208ENST00000506063 KIF15Q9NS87 1388 aa5.61□□□□□ -1.51
TCOF1-208ENST00000506063 RGPD8O14715 1765 aaPredicted RBP5.6□□□□□ -1.51
TCOF1-208ENST00000506063 COL14A1Q05707 1796 aaKnown RBP5.6□□□□□ -1.51
TCOF1-208ENST00000506063 E9PCH4 1651 aa5.6□□□□□ -1.51
TCOF1-208ENST00000506063 SPATA31A5Q5VU36 1347 aa5.6□□□□□ -1.51
TCOF1-208ENST00000506063 SPATA31A7Q8IWB4 1347 aa5.6□□□□□ -1.51
TCOF1-208ENST00000506063 FOXO3O43524 673 aa5.6□□□□□ -1.51
TCOF1-208ENST00000506063 UBTFP17480 764 aaKnown RBP5.6□□□□□ -1.51
TCOF1-208ENST00000506063 HDGFP51858 240 aaKnown RBP5.6□□□□□ -1.51
TCOF1-208ENST00000506063 JMYQ8N9B5 988 aa5.6□□□□□ -1.51
TCOF1-208ENST00000506063 CCDC9Q9Y3X0 531 aaKnown RBP5.6□□□□□ -1.51
TCOF1-208ENST00000506063 TNS2Q63HR2 1409 aa5.59□□□□□ -1.51
TCOF1-208ENST00000506063 FAM196AQ6ZSG2 479 aa5.59□□□□□ -1.51
TCOF1-208ENST00000506063 CABLES1Q8TDN4 633 aa5.59□□□□□ -1.51
TCOF1-208ENST00000506063 ATF5Q9Y2D1 282 aaPredicted RBP5.59□□□□□ -1.51
TCOF1-208ENST00000506063 KIF1AQ12756 1690 aa5.59□□□□□ -1.52
TCOF1-208ENST00000506063 KANK1Q14678 1352 aa5.58□□□□□ -1.52
TCOF1-208ENST00000506063 FMN2Q9NZ56 1722 aa5.58□□□□□ -1.52
TCOF1-208ENST00000506063 A0A0G2JS52 829 aa5.58□□□□□ -1.52
TCOF1-208ENST00000506063 MYT1Q01538 1121 aa5.58□□□□□ -1.52
TCOF1-208ENST00000506063 TNS3Q68CZ2 1445 aa5.57□□□□□ -1.52
TCOF1-208ENST00000506063 RRBP1Q9P2E9 1410 aaKnown RBP5.57□□□□□ -1.52
TCOF1-208ENST00000506063 TRPM3Q9HCF6 1732 aaPredicted RBP5.57□□□□□ -1.52
TCOF1-208ENST00000506063 KIF3CO14782 793 aa5.57□□□□□ -1.52
TCOF1-208ENST00000506063 PROM2Q8N271 834 aa5.57□□□□□ -1.52
TCOF1-208ENST00000506063 PARP4Q9UKK3 1724 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms