RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 SBNO2Q9Y2G9 1366 aa9.87□□□□□ -0.83
PPARGC1A-204ENST00000506055 IGHDP01880 384 aa9.87□□□□□ -0.83
PPARGC1A-204ENST00000506055 TCP11L2Q8N4U5 519 aa9.87□□□□□ -0.83
PPARGC1A-204ENST00000506055 NGEFQ8N5V2 710 aa9.87□□□□□ -0.83
PPARGC1A-204ENST00000506055 COG6Q9Y2V7 657 aa9.87□□□□□ -0.83
PPARGC1A-204ENST00000506055 CD109Q6YHK3 1445 aa9.87□□□□□ -0.83
PPARGC1A-204ENST00000506055 IFT172Q9UG01 1749 aa9.87□□□□□ -0.83
PPARGC1A-204ENST00000506055 RAPGEF3O95398 923 aa9.86□□□□□ -0.83
PPARGC1A-204ENST00000506055 RUNDC1Q96C34 613 aa9.86□□□□□ -0.83
PPARGC1A-204ENST00000506055 ADGRB3O60242 1522 aa9.86□□□□□ -0.83
PPARGC1A-204ENST00000506055 CGNL1Q0VF96 1302 aa9.86□□□□□ -0.83
PPARGC1A-204ENST00000506055 LMTK2Q8IWU2 1503 aa9.86□□□□□ -0.83
PPARGC1A-204ENST00000506055 PPM1GO15355 546 aaPredicted RBP9.85□□□□□ -0.83
PPARGC1A-204ENST00000506055 PDE3AQ14432 1141 aa9.85□□□□□ -0.83
PPARGC1A-204ENST00000506055 CABP2Q9NPB3 220 aa9.85□□□□□ -0.83
PPARGC1A-204ENST00000506055 MYO3AQ8NEV4 1616 aa9.84□□□□□ -0.83
PPARGC1A-204ENST00000506055 RPGRIP1LQ68CZ1 1315 aa9.84□□□□□ -0.83
PPARGC1A-204ENST00000506055 SETBP1Q9Y6X0 1596 aa9.84□□□□□ -0.83
PPARGC1A-204ENST00000506055 VGFO15240 615 aaPredicted RBP9.84□□□□□ -0.83
PPARGC1A-204ENST00000506055 CFAP53Q96M91 514 aa9.84□□□□□ -0.83
PPARGC1A-204ENST00000506055 BCL2L13Q9BXK5 485 aa9.84□□□□□ -0.83
PPARGC1A-204ENST00000506055 STK26Q9P289 416 aa9.84□□□□□ -0.83
PPARGC1A-204ENST00000506055 POGZQ7Z3K3 1410 aa9.84□□□□□ -0.83
PPARGC1A-204ENST00000506055 EVC2Q86UK5 1308 aa9.84□□□□□ -0.83
PPARGC1A-204ENST00000506055 CLUAP1Q96AJ1 413 aa9.84□□□□□ -0.83
PPARGC1A-204ENST00000506055 QRICH2Q9H0J4 1663 aa9.83□□□□□ -0.84
PPARGC1A-204ENST00000506055 U2AF1L5P0DN76 240 aaPredicted RBP9.83□□□□□ -0.84
PPARGC1A-204ENST00000506055 RARSP54136 660 aaKnown RBP9.83□□□□□ -0.84
PPARGC1A-204ENST00000506055 U2AF1Q01081 240 aaKnown RBP eCLIP9.83□□□□□ -0.84
PPARGC1A-204ENST00000506055 USP35Q9P2H5 1018 aa9.83□□□□□ -0.84
PPARGC1A-204ENST00000506055 ADGRB1O14514 1584 aa9.83□□□□□ -0.84
PPARGC1A-204ENST00000506055 OSCARQ8IYS5 282 aa9.83□□□□□ -0.84
PPARGC1A-204ENST00000506055 FRMPD1Q5SYB0 1578 aa9.82□□□□□ -0.84
PPARGC1A-204ENST00000506055 PPLO60437 1756 aa9.82□□□□□ -0.84
PPARGC1A-204ENST00000506055 TNNQ9UQP3 1299 aa9.82□□□□□ -0.84
PPARGC1A-204ENST00000506055 MLH3Q9UHC1 1453 aa9.82□□□□□ -0.84
PPARGC1A-204ENST00000506055 SRPK2P78362 688 aaKnown RBP9.81□□□□□ -0.84
PPARGC1A-204ENST00000506055 IDI1Q13907 227 aa9.81□□□□□ -0.84
PPARGC1A-204ENST00000506055 WDR63Q8IWG1 891 aa9.81□□□□□ -0.84
PPARGC1A-204ENST00000506055 SHPRHQ149N8 1683 aa9.81□□□□□ -0.84
PPARGC1A-204ENST00000506055 ABCC3O15438 1527 aa9.8□□□□□ -0.84
PPARGC1A-204ENST00000506055 RLBP1P12271 317 aa9.8□□□□□ -0.84
PPARGC1A-204ENST00000506055 HECW2Q9P2P5 1572 aa9.8□□□□□ -0.84
PPARGC1A-204ENST00000506055 U2SURPO15042 1029 aaKnown RBP9.8□□□□□ -0.84
PPARGC1A-204ENST00000506055 NFKBIBQ15653 356 aa9.79□□□□□ -0.84
PPARGC1A-204ENST00000506055 GGNBP2Q9H3C7 697 aa9.79□□□□□ -0.84
PPARGC1A-204ENST00000506055 ANKRD36BQ8N2N9 1353 aa9.79□□□□□ -0.84
PPARGC1A-204ENST00000506055 MYH16Q9H6N6 1097 aa9.79□□□□□ -0.84
PPARGC1A-204ENST00000506055 PCDHB15Q9Y5E8 787 aa9.79□□□□□ -0.84
PPARGC1A-204ENST00000506055 NINLQ9Y2I6 1382 aa9.79□□□□□ -0.84
PPARGC1A-204ENST00000506055 ZC3H13Q5T200 1668 aaKnown RBP9.79□□□□□ -0.84
PPARGC1A-204ENST00000506055 GLI2P10070 1586 aa9.78□□□□□ -0.84
PPARGC1A-204ENST00000506055 SEC24BO95487 1268 aa9.78□□□□□ -0.84
PPARGC1A-204ENST00000506055 CCDC27Q2M243 656 aa9.78□□□□□ -0.84
PPARGC1A-204ENST00000506055 TSR2Q969E8 191 aaKnown RBP9.78□□□□□ -0.84
PPARGC1A-204ENST00000506055 CFAP74Q9C0B2 1584 aa9.77□□□□□ -0.84
PPARGC1A-204ENST00000506055 IQSEC2Q5JU85 1478 aa9.77□□□□□ -0.84
PPARGC1A-204ENST00000506055 MINK1Q8N4C8 1332 aaPredicted RBP9.77□□□□□ -0.84
PPARGC1A-204ENST00000506055 MAPK8IP3Q9UPT6 1336 aa9.77□□□□□ -0.84
PPARGC1A-204ENST00000506055 PMFBP1Q8TBY8 1022 aa9.77□□□□□ -0.85
PPARGC1A-204ENST00000506055 PUS7Q96PZ0 661 aaKnown RBP9.77□□□□□ -0.85
PPARGC1A-204ENST00000506055 TULP4Q9NRJ4 1543 aa9.77□□□□□ -0.85
PPARGC1A-204ENST00000506055 SIGLEC1Q9BZZ2 1709 aa9.77□□□□□ -0.85
PPARGC1A-204ENST00000506055 POGKQ9P215 609 aa9.77□□□□□ -0.85
PPARGC1A-204ENST00000506055 CAMSAP1Q5T5Y3 1602 aa9.77□□□□□ -0.85
PPARGC1A-204ENST00000506055 A0A1W2PP64 1363 aa9.76□□□□□ -0.85
PPARGC1A-204ENST00000506055 PRAM1Q96QH2 718 aa9.76□□□□□ -0.85
PPARGC1A-204ENST00000506055 NSD2O96028 1365 aa9.76□□□□□ -0.85
PPARGC1A-204ENST00000506055 NEXMIFQ5QGS0 1516 aa9.75□□□□□ -0.85
PPARGC1A-204ENST00000506055 FTSJ3Q8IY81 847 aaKnown RBP9.75□□□□□ -0.85
PPARGC1A-204ENST00000506055 SLC52A1Q9NWF4 448 aa9.75□□□□□ -0.85
PPARGC1A-204ENST00000506055 FYB1O15117 783 aa9.75□□□□□ -0.85
PPARGC1A-204ENST00000506055 RWDD1Q9H446 243 aaPredicted RBP9.75□□□□□ -0.85
PPARGC1A-204ENST00000506055 TERF2IPQ9NYB0 399 aa9.75□□□□□ -0.85
PPARGC1A-204ENST00000506055 USP19O94966 1318 aa9.74□□□□□ -0.85
PPARGC1A-204ENST00000506055 USP32Q8NFA0 1604 aa9.74□□□□□ -0.85
PPARGC1A-204ENST00000506055 EXOSC9Q06265 439 aaKnown RBP9.74□□□□□ -0.85
PPARGC1A-204ENST00000506055 FBXO31Q5XUX0 539 aaPredicted RBP9.74□□□□□ -0.85
PPARGC1A-204ENST00000506055 ARHGEF28Q8N1W1 1705 aaKnown RBP9.74□□□□□ -0.85
PPARGC1A-204ENST00000506055 PDZRN3Q9UPQ7 1066 aa9.74□□□□□ -0.85
PPARGC1A-204ENST00000506055 TMPOP42166 694 aaKnown RBP9.74□□□□□ -0.85
PPARGC1A-204ENST00000506055 AAMPQ13685 434 aa9.74□□□□□ -0.85
PPARGC1A-204ENST00000506055 GSE1Q14687 1217 aa9.74□□□□□ -0.85
PPARGC1A-204ENST00000506055 ZKSCAN2Q63HK3 967 aa9.74□□□□□ -0.85
PPARGC1A-204ENST00000506055 DZIP1LQ8IYY4 767 aaKnown RBP9.74□□□□□ -0.85
PPARGC1A-204ENST00000506055 PLEKHF1Q96S99 279 aa9.74□□□□□ -0.85
PPARGC1A-204ENST00000506055 SMC4Q9NTJ3 1288 aa9.74□□□□□ -0.85
PPARGC1A-204ENST00000506055 FRAT2O75474 233 aaPredicted RBP9.73□□□□□ -0.85
PPARGC1A-204ENST00000506055 MVPQ14764 893 aaKnown RBP9.73□□□□□ -0.85
PPARGC1A-204ENST00000506055 STAG3Q9UJ98 1225 aa9.73□□□□□ -0.85
PPARGC1A-204ENST00000506055 ABCC11Q96J66 1382 aa9.73□□□□□ -0.85
PPARGC1A-204ENST00000506055 PIK3C2BO00750 1634 aa9.73□□□□□ -0.85
PPARGC1A-204ENST00000506055 TRIM35Q9UPQ4 493 aa9.73□□□□□ -0.85
PPARGC1A-204ENST00000506055 YEATS2Q9ULM3 1422 aa9.73□□□□□ -0.85
PPARGC1A-204ENST00000506055 RIPK4P57078 832 aa9.72□□□□□ -0.85
PPARGC1A-204ENST00000506055 CABP1Q9NZU7 370 aa9.72□□□□□ -0.85
PPARGC1A-204ENST00000506055 NEO1Q92859 1461 aa9.72□□□□□ -0.85
PPARGC1A-204ENST00000506055 DIP2CQ9Y2E4 1556 aa9.72□□□□□ -0.85
PPARGC1A-204ENST00000506055 FBLN1P23142 703 aa9.72□□□□□ -0.85
PPARGC1A-204ENST00000506055 IL27Q8NEV9 243 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms