RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 SYMPKQ92797 1274 aaKnown RBP8.5□□□□□ -1.05
TOPBP1-204ENST00000505804 C6orf229H3BNL8 230 aa8.49□□□□□ -1.05
TOPBP1-204ENST00000505804 COPS2P61201 443 aa8.49□□□□□ -1.05
TOPBP1-204ENST00000505804 NYAP1Q6ZVC0 841 aa8.49□□□□□ -1.05
TOPBP1-204ENST00000505804 RFC5P40937 340 aa8.48□□□□□ -1.05
TOPBP1-204ENST00000505804 PRPF38BQ5VTL8 546 aaKnown RBP8.48□□□□□ -1.05
TOPBP1-204ENST00000505804 PPP2R2DQ66LE6 453 aa8.48□□□□□ -1.05
TOPBP1-204ENST00000505804 ZBTB3Q9H5J0 574 aa8.48□□□□□ -1.05
TOPBP1-204ENST00000505804 NR1I2O75469 434 aa8.47□□□□□ -1.05
TOPBP1-204ENST00000505804 MTMR2Q13614 643 aa8.47□□□□□ -1.05
TOPBP1-204ENST00000505804 HCSTQ9UBK5 93 aa8.47□□□□□ -1.05
TOPBP1-204ENST00000505804 Q3C1V9 767 aa8.46□□□□□ -1.06
TOPBP1-204ENST00000505804 RNF19BQ6ZMZ0 732 aa8.46□□□□□ -1.06
TOPBP1-204ENST00000505804 MMRN1Q13201 1228 aa8.45□□□□□ -1.06
TOPBP1-204ENST00000505804 BRICD5Q6PL45 260 aa8.45□□□□□ -1.06
TOPBP1-204ENST00000505804 MTRQ99707 1265 aa8.45□□□□□ -1.06
TOPBP1-204ENST00000505804 TJAP1Q5JTD0 557 aa8.44□□□□□ -1.06
TOPBP1-204ENST00000505804 ZNF516Q92618 1163 aa8.44□□□□□ -1.06
TOPBP1-204ENST00000505804 THAP11Q96EK4 314 aa8.44□□□□□ -1.06
TOPBP1-204ENST00000505804 SALL2Q9Y467 1007 aaPredicted RBP8.44□□□□□ -1.06
TOPBP1-204ENST00000505804 SPDYE5A6NIY4 337 aa8.43□□□□□ -1.06
TOPBP1-204ENST00000505804 CFAP99D6REC4 459 aa8.43□□□□□ -1.06
TOPBP1-204ENST00000505804 ZPR1O75312 459 aa8.43□□□□□ -1.06
TOPBP1-204ENST00000505804 FMNL1O95466 1100 aaPredicted RBP8.43□□□□□ -1.06
TOPBP1-204ENST00000505804 AP1G2O75843 785 aa8.42□□□□□ -1.06
TOPBP1-204ENST00000505804 TMEM259Q4ZIN3 620 aa8.42□□□□□ -1.06
TOPBP1-204ENST00000505804 RETREG3Q86VR2 466 aa8.42□□□□□ -1.06
TOPBP1-204ENST00000505804 PRR7Q8TB68 274 aa8.42□□□□□ -1.06
TOPBP1-204ENST00000505804 TSC1Q92574 1164 aa8.42□□□□□ -1.06
TOPBP1-204ENST00000505804 USB1Q9BQ65 265 aaKnown RBP8.42□□□□□ -1.06
TOPBP1-204ENST00000505804 SPSB2Q99619 263 aa8.41□□□□□ -1.06
TOPBP1-204ENST00000505804 IL21Q9HBE4 155 aa8.41□□□□□ -1.06
TOPBP1-204ENST00000505804 TLL1O43897 1013 aa8.4□□□□□ -1.06
TOPBP1-204ENST00000505804 CTDSPL2Q05D32 466 aa8.4□□□□□ -1.06
TOPBP1-204ENST00000505804 FAM160A2Q8N612 972 aaPredicted RBP8.4□□□□□ -1.06
TOPBP1-204ENST00000505804 SNRKQ9NRH2 765 aa8.4□□□□□ -1.06
TOPBP1-204ENST00000505804 BANK1Q8NDB2 785 aa8.39□□□□□ -1.07
TOPBP1-204ENST00000505804 NKX2-3Q8TAU0 364 aa8.39□□□□□ -1.07
TOPBP1-204ENST00000505804 FLIIQ13045 1269 aa8.38□□□□□ -1.07
TOPBP1-204ENST00000505804 TIMELESSQ9UNS1 1208 aa8.38□□□□□ -1.07
TOPBP1-204ENST00000505804 C14orf37Q86TY3 774 aa8.37□□□□□ -1.07
TOPBP1-204ENST00000505804 HELBQ8NG08 1087 aaPredicted RBP8.37□□□□□ -1.07
TOPBP1-204ENST00000505804 PER1O15534 1290 aaPredicted RBP8.36□□□□□ -1.07
TOPBP1-204ENST00000505804 ADH1BP00325 375 aa8.36□□□□□ -1.07
TOPBP1-204ENST00000505804 USP17L8P0C7I0 530 aa8.36□□□□□ -1.07
TOPBP1-204ENST00000505804 MCM6Q14566 821 aa8.36□□□□□ -1.07
TOPBP1-204ENST00000505804 LRRN4Q8WUT4 740 aa8.36□□□□□ -1.07
TOPBP1-204ENST00000505804 KCNC4Q03721 635 aa8.35□□□□□ -1.07
TOPBP1-204ENST00000505804 DESI1Q6ICB0 168 aa8.35□□□□□ -1.07
TOPBP1-204ENST00000505804 PRDM9Q9NQV7 894 aa8.35□□□□□ -1.07
TOPBP1-204ENST00000505804 MSS51Q4VC12 460 aa8.34□□□□□ -1.07
TOPBP1-204ENST00000505804 ITGBL1O95965 494 aaPredicted RBP8.33□□□□□ -1.08
TOPBP1-204ENST00000505804 JUNDP17535 347 aa8.33□□□□□ -1.08
TOPBP1-204ENST00000505804 LYPD8Q6UX82 237 aa8.33□□□□□ -1.08
TOPBP1-204ENST00000505804 MTMR14Q8NCE2 650 aa8.33□□□□□ -1.08
TOPBP1-204ENST00000505804 SLC6A16Q9GZN6 736 aa8.33□□□□□ -1.08
TOPBP1-204ENST00000505804 DXOO77932 396 aaKnown RBP8.32□□□□□ -1.08
TOPBP1-204ENST00000505804 HMX1Q9NP08 348 aaPredicted RBP8.32□□□□□ -1.08
TOPBP1-204ENST00000505804 UBTFP17480 764 aaKnown RBP8.31□□□□□ -1.08
TOPBP1-204ENST00000505804 MMP16P51512 607 aa8.31□□□□□ -1.08
TOPBP1-204ENST00000505804 ERICH6Q7L0X2 663 aa8.31□□□□□ -1.08
TOPBP1-204ENST00000505804 S1PR4O95977 384 aa8.3□□□□□ -1.08
TOPBP1-204ENST00000505804 EPS8L1Q8TE68 723 aa8.3□□□□□ -1.08
TOPBP1-204ENST00000505804 PTPRNQ16849 979 aa8.29□□□□□ -1.08
TOPBP1-204ENST00000505804 CLUAP1Q96AJ1 413 aa8.29□□□□□ -1.08
TOPBP1-204ENST00000505804 POM121Q96HA1 1249 aa8.29□□□□□ -1.08
TOPBP1-204ENST00000505804 GJD4Q96KN9 370 aaPredicted RBP8.29□□□□□ -1.08
TOPBP1-204ENST00000505804 ZMYND15Q9H091 742 aa8.29□□□□□ -1.08
TOPBP1-204ENST00000505804 PPEF1O14829 653 aaPredicted RBP8.28□□□□□ -1.08
TOPBP1-204ENST00000505804 NR6A1Q15406 480 aa8.28□□□□□ -1.08
TOPBP1-204ENST00000505804 NUDT12Q9BQG2 462 aa8.28□□□□□ -1.08
TOPBP1-204ENST00000505804 TRIM34Q9BYJ4 488 aa8.28□□□□□ -1.08
TOPBP1-204ENST00000505804 CCNYL3P0C7X3 344 aa8.27□□□□□ -1.09
TOPBP1-204ENST00000505804 CTHP32929 405 aa8.27□□□□□ -1.09
TOPBP1-204ENST00000505804 CCDC24Q8N4L8 307 aa8.27□□□□□ -1.09
TOPBP1-204ENST00000505804 EVA1BQ9NVM1 165 aa8.27□□□□□ -1.09
TOPBP1-204ENST00000505804 MAP10Q9P2G4 905 aa8.27□□□□□ -1.09
TOPBP1-204ENST00000505804 COG6Q9Y2V7 657 aa8.27□□□□□ -1.09
TOPBP1-204ENST00000505804 GDPD2Q9HCC8 539 aa8.26□□□□□ -1.09
TOPBP1-204ENST00000505804 APBB1O00213 710 aa8.25□□□□□ -1.09
TOPBP1-204ENST00000505804 SOCS7O14512 581 aa8.25□□□□□ -1.09
TOPBP1-204ENST00000505804 RAD21O60216 631 aa8.25□□□□□ -1.09
TOPBP1-204ENST00000505804 F12P00748 615 aaPredicted RBP8.25□□□□□ -1.09
TOPBP1-204ENST00000505804 PPP1R18Q6NYC8 613 aa8.25□□□□□ -1.09
TOPBP1-204ENST00000505804 TBC1D2BQ9UPU7 963 aa8.25□□□□□ -1.09
TOPBP1-204ENST00000505804 FCF1Q9Y324 198 aaKnown RBP8.25□□□□□ -1.09
TOPBP1-204ENST00000505804 RNF223E7ERA6 249 aa8.24□□□□□ -1.09
TOPBP1-204ENST00000505804 KCNH2Q12809 1159 aa8.24□□□□□ -1.09
TOPBP1-204ENST00000505804 PTCRAQ6ISU1 281 aaPredicted RBP8.24□□□□□ -1.09
TOPBP1-204ENST00000505804 PRM3Q9NNZ6 103 aa8.24□□□□□ -1.09
TOPBP1-204ENST00000505804 ABL2P42684 1182 aa8.23□□□□□ -1.09
TOPBP1-204ENST00000505804 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.23□□□□□ -1.09
TOPBP1-204ENST00000505804 PLA2G2EQ9NZK7 142 aa8.23□□□□□ -1.09
TOPBP1-204ENST00000505804 NDUFB9Q9Y6M9 179 aa8.23□□□□□ -1.09
TOPBP1-204ENST00000505804 A6NJR5 290 aa8.22□□□□□ -1.09
TOPBP1-204ENST00000505804 GGCXP38435 758 aa8.22□□□□□ -1.09
TOPBP1-204ENST00000505804 IFFO2Q5TF58 517 aa8.2□□□□□ -1.1
TOPBP1-204ENST00000505804 ANKLE1Q8NAG6 615 aa8.2□□□□□ -1.1
TOPBP1-204ENST00000505804 GPR37L1O60883 481 aa8.19□□□□□ -1.1
TOPBP1-204ENST00000505804 PLA2G2CQ5R387 149 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms