RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 MAST1Q9Y2H9 1570 aa11.45□□□□□ -0.58
VCAN-206ENST00000505615 VASPP50552 380 aaPredicted RBP11.44□□□□□ -0.58
VCAN-206ENST00000505615 CDAN1Q8IWY9 1227 aa11.44□□□□□ -0.58
VCAN-206ENST00000505615 CDK12Q9NYV4 1490 aaPredicted RBP11.44□□□□□ -0.58
VCAN-206ENST00000505615 TMEM2Q9UHN6 1383 aa11.43□□□□□ -0.58
VCAN-206ENST00000505615 KCNA6P17658 529 aa11.43□□□□□ -0.58
VCAN-206ENST00000505615 TRIM52Q96A61 297 aa11.43□□□□□ -0.58
VCAN-206ENST00000505615 FGD6Q6ZV73 1430 aa11.43□□□□□ -0.58
VCAN-206ENST00000505615 RBM33Q96EV2 1170 aaKnown RBP11.42□□□□□ -0.58
VCAN-206ENST00000505615 ARHGAP31Q2M1Z3 1444 aa11.42□□□□□ -0.58
VCAN-206ENST00000505615 AHDC1Q5TGY3 1603 aaPredicted RBP11.42□□□□□ -0.58
VCAN-206ENST00000505615 RSPH4AQ5TD94 716 aa11.41□□□□□ -0.58
VCAN-206ENST00000505615 PDCD7Q8N8D1 485 aaKnown RBP11.41□□□□□ -0.58
VCAN-206ENST00000505615 CHD2O14647 1828 aaKnown RBP11.41□□□□□ -0.58
VCAN-206ENST00000505615 ZNF772Q68DY9 489 aaPredicted RBP11.4□□□□□ -0.58
VCAN-206ENST00000505615 PROSER2Q86WR7 435 aaPredicted RBP11.4□□□□□ -0.58
VCAN-206ENST00000505615 MSH6P52701 1360 aa11.4□□□□□ -0.59
VCAN-206ENST00000505615 EFCAB6Q5THR3 1501 aa11.4□□□□□ -0.59
VCAN-206ENST00000505615 SPATA31A6Q5VVP1 1343 aa11.39□□□□□ -0.59
VCAN-206ENST00000505615 SLC24A1O60721 1099 aa11.39□□□□□ -0.59
VCAN-206ENST00000505615 GSE1Q14687 1217 aa11.39□□□□□ -0.59
VCAN-206ENST00000505615 DIP2AQ14689 1571 aa11.39□□□□□ -0.59
VCAN-206ENST00000505615 ZNF467Q7Z7K2 595 aaPredicted RBP11.39□□□□□ -0.59
VCAN-206ENST00000505615 SLAIN2Q9P270 581 aa11.39□□□□□ -0.59
VCAN-206ENST00000505615 EID1Q9Y6B2 187 aa11.39□□□□□ -0.59
VCAN-206ENST00000505615 CHRM1P11229 460 aaPredicted RBP11.38□□□□□ -0.59
VCAN-206ENST00000505615 RGS12O14924 1447 aa11.36□□□□□ -0.59
VCAN-206ENST00000505615 RXRBP28702 533 aa11.36□□□□□ -0.59
VCAN-206ENST00000505615 SLC26A8Q96RN1 970 aa11.36□□□□□ -0.59
VCAN-206ENST00000505615 TMEM121BQ9BXQ6 578 aaPredicted RBP11.36□□□□□ -0.59
VCAN-206ENST00000505615 MYO5BQ9ULV0 1848 aa11.36□□□□□ -0.59
VCAN-206ENST00000505615 ADGRB3O60242 1522 aa11.35□□□□□ -0.59
VCAN-206ENST00000505615 DUOX2Q9NRD8 1548 aa11.35□□□□□ -0.59
VCAN-206ENST00000505615 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.35□□□□□ -0.59
VCAN-206ENST00000505615 TSPY4P0CV99 314 aa11.35□□□□□ -0.59
VCAN-206ENST00000505615 TSPY10P0CW01 314 aa11.35□□□□□ -0.59
VCAN-206ENST00000505615 MEX3CQ5U5Q3 659 aaKnown RBP11.35□□□□□ -0.59
VCAN-206ENST00000505615 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.35□□□□□ -0.59
VCAN-206ENST00000505615 KLHL34Q8N239 644 aa11.34□□□□□ -0.59
VCAN-206ENST00000505615 EP400Q96L91 3159 aa11.34□□□□□ -0.59
VCAN-206ENST00000505615 SETBP1Q9Y6X0 1596 aa11.32□□□□□ -0.6
VCAN-206ENST00000505615 AFF2P51816 1311 aa11.32□□□□□ -0.6
VCAN-206ENST00000505615 LMTK2Q8IWU2 1503 aa11.31□□□□□ -0.6
VCAN-206ENST00000505615 CROCC2H7BZ55 1655 aa11.31□□□□□ -0.6
VCAN-206ENST00000505615 SNPHO15079 494 aa11.31□□□□□ -0.6
VCAN-206ENST00000505615 IDI1Q13907 227 aa11.31□□□□□ -0.6
VCAN-206ENST00000505615 ZFYVE9O95405 1425 aa11.31□□□□□ -0.6
VCAN-206ENST00000505615 NCOA3Q9Y6Q9 1424 aa11.31□□□□□ -0.6
VCAN-206ENST00000505615 NOS1P29475 1434 aa11.3□□□□□ -0.6
VCAN-206ENST00000505615 ERBINQ96RT1 1412 aa11.3□□□□□ -0.6
VCAN-206ENST00000505615 NHSL1Q5SYE7 1610 aa11.3□□□□□ -0.6
VCAN-206ENST00000505615 PLEKHG1Q9ULL1 1385 aa11.28□□□□□ -0.6
VCAN-206ENST00000505615 GCC2Q8IWJ2 1684 aa11.28□□□□□ -0.6
VCAN-206ENST00000505615 PSEN1P49768 467 aa11.28□□□□□ -0.6
VCAN-206ENST00000505615 MKRN3Q13064 507 aaKnown RBP11.28□□□□□ -0.6
VCAN-206ENST00000505615 KIF15Q9NS87 1388 aa11.28□□□□□ -0.6
VCAN-206ENST00000505615 SETD5Q9C0A6 1442 aa11.26□□□□□ -0.61
VCAN-206ENST00000505615 ASXL1Q8IXJ9 1541 aa11.26□□□□□ -0.61
VCAN-206ENST00000505615 NUTM2BA6NNL0 878 aaPredicted RBP11.26□□□□□ -0.61
VCAN-206ENST00000505615 NUTM2EB1AL46 878 aaPredicted RBP11.26□□□□□ -0.61
VCAN-206ENST00000505615 RBM6P78332 1123 aaKnown RBP11.26□□□□□ -0.61
VCAN-206ENST00000505615 GOLGA2Q08379 1002 aa11.26□□□□□ -0.61
VCAN-206ENST00000505615 BRINP3Q76B58 766 aa11.26□□□□□ -0.61
VCAN-206ENST00000505615 NUTM2AQ8IVF1 878 aaPredicted RBP11.26□□□□□ -0.61
VCAN-206ENST00000505615 L3MBTL3Q96JM7 780 aaPredicted RBP11.26□□□□□ -0.61
VCAN-206ENST00000505615 TMEM131LA2VDJ0 1609 aa11.25□□□□□ -0.61
VCAN-206ENST00000505615 C3orf67Q6ZVT6 689 aa11.25□□□□□ -0.61
VCAN-206ENST00000505615 ADAMTS13Q76LX8 1427 aa11.25□□□□□ -0.61
VCAN-206ENST00000505615 CADPS2Q86UW7 1296 aa11.24□□□□□ -0.61
VCAN-206ENST00000505615 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.24□□□□□ -0.61
VCAN-206ENST00000505615 ATAD2Q6PL18 1390 aa11.24□□□□□ -0.61
VCAN-206ENST00000505615 MYOM3Q5VTT5 1437 aa11.24□□□□□ -0.61
VCAN-206ENST00000505615 RIMS2Q9UQ26 1411 aa11.24□□□□□ -0.61
VCAN-206ENST00000505615 PDAP1Q13442 181 aaKnown RBP11.23□□□□□ -0.61
VCAN-206ENST00000505615 NUTM2DQ5VT03 806 aaPredicted RBP11.23□□□□□ -0.61
VCAN-206ENST00000505615 MARVELD3Q96A59 401 aa11.23□□□□□ -0.61
VCAN-206ENST00000505615 QTRT2Q9H974 415 aaKnown RBP11.23□□□□□ -0.61
VCAN-206ENST00000505615 ABCC5O15440 1437 aa11.22□□□□□ -0.61
VCAN-206ENST00000505615 DCCP43146 1447 aa11.22□□□□□ -0.61
VCAN-206ENST00000505615 KANK1Q14678 1352 aa11.22□□□□□ -0.61
VCAN-206ENST00000505615 IFNLR1Q8IU57 520 aaPredicted RBP11.22□□□□□ -0.61
VCAN-206ENST00000505615 PNPLA6Q8IY17 1366 aa11.22□□□□□ -0.61
VCAN-206ENST00000505615 C19orf44Q9H6X5 657 aa11.22□□□□□ -0.61
VCAN-206ENST00000505615 TBX22Q9Y458 520 aa11.22□□□□□ -0.61
VCAN-206ENST00000505615 XRN1Q8IZH2 1706 aaKnown RBP11.21□□□□□ -0.61
VCAN-206ENST00000505615 MST1RQ04912 1400 aa11.21□□□□□ -0.61
VCAN-206ENST00000505615 C8orf37Q96NL8 207 aa11.21□□□□□ -0.61
VCAN-206ENST00000505615 LRP5O75197 1615 aa11.2□□□□□ -0.62
VCAN-206ENST00000505615 PTPRUQ92729 1446 aa11.2□□□□□ -0.62
VCAN-206ENST00000505615 PIK3R4Q99570 1358 aa11.2□□□□□ -0.62
VCAN-206ENST00000505615 ATF3P18847 181 aa11.2□□□□□ -0.62
VCAN-206ENST00000505615 C14orf37Q86TY3 774 aa11.2□□□□□ -0.62
VCAN-206ENST00000505615 BCANQ96GW7 911 aa11.2□□□□□ -0.62
VCAN-206ENST00000505615 SPNS2Q8IVW8 549 aa11.19□□□□□ -0.62
VCAN-206ENST00000505615 SPOCK2Q92563 424 aa11.19□□□□□ -0.62
VCAN-206ENST00000505615 RRP7BPQ9NSQ0 103 aa11.19□□□□□ -0.62
VCAN-206ENST00000505615 SLC52A1Q9NWF4 448 aa11.19□□□□□ -0.62
VCAN-206ENST00000505615 LAMC1P11047 1609 aa11.19□□□□□ -0.62
VCAN-206ENST00000505615 TRPM2O94759 1503 aa11.19□□□□□ -0.62
VCAN-206ENST00000505615 RPRD2Q5VT52 1461 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms