RNA–Protein interactions for RNA: ENST00000505534.5

DDR1-257, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-257ENST00000505534 COL22A1Q8NFW1 1626 aaPredicted RBP25.51■■□□□ 1.67
DDR1-257ENST00000505534 NPHP3Q7Z494 1330 aa25.47■■□□□ 1.67
DDR1-257ENST00000505534 SLC4A1APQ9BWU0 796 aaKnown RBP25.47■■□□□ 1.67
DDR1-257ENST00000505534 ATRNO75882 1429 aa25.46■■□□□ 1.67
DDR1-257ENST00000505534 ESCO1Q5FWF5 840 aa25.45■■□□□ 1.66
DDR1-257ENST00000505534 CDC42BPGQ6DT37 1551 aa25.44■■□□□ 1.66
DDR1-257ENST00000505534 MARF1Q9Y4F3 1742 aaKnown RBP25.44■■□□□ 1.66
DDR1-257ENST00000505534 MYOM2P54296 1465 aa25.44■■□□□ 1.66
DDR1-257ENST00000505534 FOXD1Q16676 465 aa25.42■■□□□ 1.66
DDR1-257ENST00000505534 PXDNQ92626 1479 aa25.4■■□□□ 1.66
DDR1-257ENST00000505534 FOXO3O43524 673 aa25.39■■□□□ 1.66
DDR1-257ENST00000505534 LRPPRCP42704 1394 aaKnown RBP25.39■■□□□ 1.65
DDR1-257ENST00000505534 BCL9LQ86UU0 1499 aa25.39■■□□□ 1.65
DDR1-257ENST00000505534 SRCAPQ6ZRS2 3230 aa25.38■■□□□ 1.65
DDR1-257ENST00000505534 CCDC125Q86Z20 511 aa25.37■■□□□ 1.65
DDR1-257ENST00000505534 EP400Q96L91 3159 aa25.36■■□□□ 1.65
DDR1-257ENST00000505534 TECPR2O15040 1411 aa25.36■■□□□ 1.65
DDR1-257ENST00000505534 ADGRF5Q8IZF2 1346 aa25.36■■□□□ 1.65
DDR1-257ENST00000505534 XPCQ01831 940 aaPredicted RBP25.35■■□□□ 1.65
DDR1-257ENST00000505534 GJD4Q96KN9 370 aaPredicted RBP25.35■■□□□ 1.65
DDR1-257ENST00000505534 ZRANB1Q9UGI0 708 aa25.35■■□□□ 1.65
DDR1-257ENST00000505534 WAPLQ7Z5K2 1190 aa25.34■■□□□ 1.65
DDR1-257ENST00000505534 STK26Q9P289 416 aa25.34■■□□□ 1.65
DDR1-257ENST00000505534 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.33■■□□□ 1.65
DDR1-257ENST00000505534 ABCC11Q96J66 1382 aa25.32■■□□□ 1.64
DDR1-257ENST00000505534 NUTM2FA1L443 756 aa25.32■■□□□ 1.64
DDR1-257ENST00000505534 KNDC1Q76NI1 1749 aa25.32■■□□□ 1.64
DDR1-257ENST00000505534 ANKRD30BQ9BXX2 1392 aa25.31■■□□□ 1.64
DDR1-257ENST00000505534 CCDC144AA2RUR9 1427 aa25.31■■□□□ 1.64
DDR1-257ENST00000505534 RGL3Q3MIN7 710 aa25.31■■□□□ 1.64
DDR1-257ENST00000505534 IFT172Q9UG01 1749 aa25.31■■□□□ 1.64
DDR1-257ENST00000505534 FMN2Q9NZ56 1722 aa25.29■■□□□ 1.64
DDR1-257ENST00000505534 SPATA31E1Q6ZUB1 1445 aa25.29■■□□□ 1.64
DDR1-257ENST00000505534 UNC5CLQ8IV45 518 aa25.28■■□□□ 1.64
DDR1-257ENST00000505534 KIF1AQ12756 1690 aa25.28■■□□□ 1.64
DDR1-257ENST00000505534 SPATA31A3Q5VYP0 1347 aa25.28■■□□□ 1.64
DDR1-257ENST00000505534 TMEM132EQ6IEE7 984 aa25.27■■□□□ 1.64
DDR1-257ENST00000505534 PLEKHH1Q9ULM0 1364 aa25.26■■□□□ 1.63
DDR1-257ENST00000505534 SLIT2O94813 1529 aa25.26■■□□□ 1.63
DDR1-257ENST00000505534 RALGAPBQ86X10 1494 aa25.23■■□□□ 1.63
DDR1-257ENST00000505534 PIK3C2GO75747 1445 aa25.23■■□□□ 1.63
DDR1-257ENST00000505534 KRT28Q7Z3Y7 464 aa25.23■■□□□ 1.63
DDR1-257ENST00000505534 SIRT1Q96EB6 747 aa25.23■■□□□ 1.63
DDR1-257ENST00000505534 RGPD8O14715 1765 aaPredicted RBP25.23■■□□□ 1.63
DDR1-257ENST00000505534 GLI3P10071 1580 aa25.22■■□□□ 1.63
DDR1-257ENST00000505534 YTHDC2Q9H6S0 1430 aaKnown RBP25.22■■□□□ 1.63
DDR1-257ENST00000505534 MPHOSPH9Q99550 1183 aa25.22■■□□□ 1.63
DDR1-257ENST00000505534 BRWD3Q6RI45 1802 aa25.21■■□□□ 1.63
DDR1-257ENST00000505534 USP32Q8NFA0 1604 aa25.21■■□□□ 1.63
DDR1-257ENST00000505534 PSME1Q06323 249 aa25.19■■□□□ 1.62
DDR1-257ENST00000505534 BLMP54132 1417 aaPredicted RBP25.19■■□□□ 1.62
DDR1-257ENST00000505534 HAP1P54257 671 aaPredicted RBP25.17■■□□□ 1.62
DDR1-257ENST00000505534 PHF8Q9UPP1 1060 aa25.17■■□□□ 1.62
DDR1-257ENST00000505534 TNS3Q68CZ2 1445 aa25.16■■□□□ 1.62
DDR1-257ENST00000505534 C14orf93Q9H972 538 aaKnown RBP25.16■■□□□ 1.62
DDR1-257ENST00000505534 NWD2Q9ULI1 1742 aa25.15■■□□□ 1.62
DDR1-257ENST00000505534 VPS72Q15906 364 aa25.15■■□□□ 1.62
DDR1-257ENST00000505534 SEPT12Q8IYM1 358 aa25.14■■□□□ 1.62
DDR1-257ENST00000505534 DHX57Q6P158 1386 aaKnown RBP25.14■■□□□ 1.61
DDR1-257ENST00000505534 SBNO1A3KN83 1393 aa25.13■■□□□ 1.61
DDR1-257ENST00000505534 ONECUT3O60422 494 aaPredicted RBP25.12■■□□□ 1.61
DDR1-257ENST00000505534 SF3B2Q13435 895 aaKnown RBP25.12■■□□□ 1.61
DDR1-257ENST00000505534 CABLES1Q8TDN4 633 aa25.12■■□□□ 1.61
DDR1-257ENST00000505534 PLCH1Q4KWH8 1693 aa25.12■■□□□ 1.61
DDR1-257ENST00000505534 NRXN1Q9ULB1 1477 aa25.11■■□□□ 1.61
DDR1-257ENST00000505534 ABCA3Q99758 1704 aa25.09■■□□□ 1.61
DDR1-257ENST00000505534 ARHGEF10O15013 1369 aa25.09■■□□□ 1.61
DDR1-257ENST00000505534 CFAP70Q5T0N1 1121 aa25.09■■□□□ 1.61
DDR1-257ENST00000505534 DEFB132Q7Z7B7 95 aa25.09■■□□□ 1.61
DDR1-257ENST00000505534 ACIN1Q9UKV3 1341 aaKnown RBP25.09■■□□□ 1.61
DDR1-257ENST00000505534 LMOD2Q6P5Q4 547 aa25.08■■□□□ 1.61
DDR1-257ENST00000505534 CCDC9Q9Y3X0 531 aaKnown RBP25.08■■□□□ 1.61
DDR1-257ENST00000505534 PRAM1Q96QH2 718 aa25.07■■□□□ 1.6
DDR1-257ENST00000505534 PLEKHG5O94827 1062 aa25.06■■□□□ 1.6
DDR1-257ENST00000505534 KRT27Q7Z3Y8 459 aa25.06■■□□□ 1.6
DDR1-257ENST00000505534 SAFB2Q14151 953 aaKnown RBP eCLIP25.05■■□□□ 1.6
DDR1-257ENST00000505534 FAM83GA6ND36 823 aa25.04■■□□□ 1.6
DDR1-257ENST00000505534 ANKARQ7Z5J8 1434 aa25.03■■□□□ 1.6
DDR1-257ENST00000505534 DLC1Q96QB1 1528 aa25.03■■□□□ 1.6
DDR1-257ENST00000505534 POGKQ9P215 609 aa25.03■■□□□ 1.6
DDR1-257ENST00000505534 PMFBP1Q8TBY8 1022 aa25.02■■□□□ 1.6
DDR1-257ENST00000505534 ADGRB2O60241 1585 aa24.99■■□□□ 1.59
DDR1-257ENST00000505534 NRAPQ86VF7 1730 aa24.99■■□□□ 1.59
DDR1-257ENST00000505534 TRPM3Q9HCF6 1732 aaPredicted RBP24.98■■□□□ 1.59
DDR1-257ENST00000505534 A0A0G2JS52 829 aa24.97■■□□□ 1.59
DDR1-257ENST00000505534 MYT1Q01538 1121 aa24.97■■□□□ 1.59
DDR1-257ENST00000505534 LRP5O75197 1615 aa24.97■■□□□ 1.59
DDR1-257ENST00000505534 GPRASP1Q5JY77 1395 aa24.96■■□□□ 1.59
DDR1-257ENST00000505534 BAG6P46379 1132 aa24.96■■□□□ 1.59
DDR1-257ENST00000505534 BTG4Q9NY30 223 aa24.96■■□□□ 1.59
DDR1-257ENST00000505534 ALS2Q96Q42 1657 aa24.96■■□□□ 1.59
DDR1-257ENST00000505534 COL14A1Q05707 1796 aaKnown RBP24.95■■□□□ 1.59
DDR1-257ENST00000505534 FAM98CQ17RN3 349 aaKnown RBP24.95■■□□□ 1.58
DDR1-257ENST00000505534 EIF3AQ14152 1382 aaKnown RBP24.93■■□□□ 1.58
DDR1-257ENST00000505534 ADGRB1O14514 1584 aa24.93■■□□□ 1.58
DDR1-257ENST00000505534 TRAK1Q9UPV9 953 aa24.93■■□□□ 1.58
DDR1-257ENST00000505534 HIRIP3Q9BW71 556 aaPredicted RBP24.92■■□□□ 1.58
DDR1-257ENST00000505534 TULP4Q9NRJ4 1543 aa24.9■■□□□ 1.58
DDR1-257ENST00000505534 RGPD1P0DJD0 1748 aa24.89■■□□□ 1.58
DDR1-257ENST00000505534 MINK1Q8N4C8 1332 aaPredicted RBP24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms