RNA–Protein interactions for RNA: ENST00000505353.1

SIL1-206, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-206ENST00000505353 C1orf167Q5SNV9 1468 aa13.67□□□□□ -0.22
SIL1-206ENST00000505353 NBPF8Q3BBV2 869 aa13.67□□□□□ -0.22
SIL1-206ENST00000505353 PRAM1Q96QH2 718 aa13.67□□□□□ -0.22
SIL1-206ENST00000505353 TRAK1Q9UPV9 953 aa13.66□□□□□ -0.22
SIL1-206ENST00000505353 CDC42BPGQ6DT37 1551 aa13.66□□□□□ -0.22
SIL1-206ENST00000505353 AHDC1Q5TGY3 1603 aaPredicted RBP13.64□□□□□ -0.23
SIL1-206ENST00000505353 ORAI2Q96SN7 254 aa13.64□□□□□ -0.23
SIL1-206ENST00000505353 COL16A1Q07092 1604 aaPredicted RBP13.64□□□□□ -0.23
SIL1-206ENST00000505353 ARHGEF28Q8N1W1 1705 aaKnown RBP13.62□□□□□ -0.23
SIL1-206ENST00000505353 DDX17Q92841 729 aaKnown RBP13.62□□□□□ -0.23
SIL1-206ENST00000505353 NHSL1Q5SYE7 1610 aa13.61□□□□□ -0.23
SIL1-206ENST00000505353 TRPM1Q7Z4N2 1603 aa13.61□□□□□ -0.23
SIL1-206ENST00000505353 SAFB2Q14151 953 aaKnown RBP eCLIP13.61□□□□□ -0.23
SIL1-206ENST00000505353 ADGRB2O60241 1585 aa13.61□□□□□ -0.23
SIL1-206ENST00000505353 FMN2Q9NZ56 1722 aa13.61□□□□□ -0.23
SIL1-206ENST00000505353 CLSPNQ9HAW4 1339 aa13.61□□□□□ -0.23
SIL1-206ENST00000505353 GPRASP1Q5JY77 1395 aa13.6□□□□□ -0.23
SIL1-206ENST00000505353 PHLPP1O60346 1717 aa13.6□□□□□ -0.23
SIL1-206ENST00000505353 POGKQ9P215 609 aa13.6□□□□□ -0.23
SIL1-206ENST00000505353 SOS2Q07890 1332 aaPredicted RBP13.6□□□□□ -0.23
SIL1-206ENST00000505353 PRR36Q9H6K5 1346 aa13.58□□□□□ -0.24
SIL1-206ENST00000505353 USP32Q8NFA0 1604 aa13.57□□□□□ -0.24
SIL1-206ENST00000505353 NUTM2FA1L443 756 aa13.57□□□□□ -0.24
SIL1-206ENST00000505353 WASLO00401 505 aaPredicted RBP13.57□□□□□ -0.24
SIL1-206ENST00000505353 HIRIP3Q9BW71 556 aaPredicted RBP13.57□□□□□ -0.24
SIL1-206ENST00000505353 RGPD8O14715 1765 aaPredicted RBP13.57□□□□□ -0.24
SIL1-206ENST00000505353 MINK1Q8N4C8 1332 aaPredicted RBP13.57□□□□□ -0.24
SIL1-206ENST00000505353 TONSLQ96HA7 1378 aa13.57□□□□□ -0.24
SIL1-206ENST00000505353 JCADQ9P266 1359 aa13.57□□□□□ -0.24
SIL1-206ENST00000505353 ESCO1Q5FWF5 840 aa13.56□□□□□ -0.24
SIL1-206ENST00000505353 MED1Q15648 1581 aaPredicted RBP13.56□□□□□ -0.24
SIL1-206ENST00000505353 FOXO3O43524 673 aa13.55□□□□□ -0.24
SIL1-206ENST00000505353 ANKARQ7Z5J8 1434 aa13.55□□□□□ -0.24
SIL1-206ENST00000505353 PXDNQ92626 1479 aa13.55□□□□□ -0.24
SIL1-206ENST00000505353 LRRC59Q96AG4 307 aaKnown RBP13.54□□□□□ -0.24
SIL1-206ENST00000505353 RGS17Q9UGC6 210 aaPredicted RBP13.54□□□□□ -0.24
SIL1-206ENST00000505353 TIMELESSQ9UNS1 1208 aa13.54□□□□□ -0.24
SIL1-206ENST00000505353 ROCK2O75116 1388 aaKnown RBP13.54□□□□□ -0.24
SIL1-206ENST00000505353 RALGAPBQ86X10 1494 aa13.54□□□□□ -0.24
SIL1-206ENST00000505353 SHPRHQ149N8 1683 aa13.53□□□□□ -0.24
SIL1-206ENST00000505353 CDK19Q9BWU1 502 aa13.52□□□□□ -0.25
SIL1-206ENST00000505353 PHF8Q9UPP1 1060 aa13.52□□□□□ -0.25
SIL1-206ENST00000505353 SPATA31A6Q5VVP1 1343 aa13.52□□□□□ -0.25
SIL1-206ENST00000505353 NPHP3Q7Z494 1330 aa13.52□□□□□ -0.25
SIL1-206ENST00000505353 CENPJQ9HC77 1338 aaPredicted RBP13.52□□□□□ -0.25
SIL1-206ENST00000505353 PNPLA6Q8IY17 1366 aa13.52□□□□□ -0.25
SIL1-206ENST00000505353 TULP4Q9NRJ4 1543 aa13.52□□□□□ -0.25
SIL1-206ENST00000505353 LRP6O75581 1613 aa13.51□□□□□ -0.25
SIL1-206ENST00000505353 ATP7BP35670 1465 aa13.51□□□□□ -0.25
SIL1-206ENST00000505353 DISP3Q9P2K9 1392 aa13.51□□□□□ -0.25
SIL1-206ENST00000505353 NUDT16Q96DE0 195 aaKnown RBP13.5□□□□□ -0.25
SIL1-206ENST00000505353 KIF1AQ12756 1690 aa13.5□□□□□ -0.25
SIL1-206ENST00000505353 XPCQ01831 940 aaPredicted RBP13.49□□□□□ -0.25
SIL1-206ENST00000505353 EIF3AQ14152 1382 aaKnown RBP13.48□□□□□ -0.25
SIL1-206ENST00000505353 SBNO2Q9Y2G9 1366 aa13.48□□□□□ -0.25
SIL1-206ENST00000505353 SPATA31A3Q5VYP0 1347 aa13.48□□□□□ -0.25
SIL1-206ENST00000505353 PLEKHG3A1L390 1219 aa13.48□□□□□ -0.25
SIL1-206ENST00000505353 ILDR2Q71H61 639 aa13.48□□□□□ -0.25
SIL1-206ENST00000505353 KRT28Q7Z3Y7 464 aa13.48□□□□□ -0.25
SIL1-206ENST00000505353 PMFBP1Q8TBY8 1022 aa13.48□□□□□ -0.25
SIL1-206ENST00000505353 CARD11Q9BXL7 1154 aa13.48□□□□□ -0.25
SIL1-206ENST00000505353 CCDC61Q9Y6R9 512 aa13.48□□□□□ -0.25
SIL1-206ENST00000505353 QRICH2Q9H0J4 1663 aa13.47□□□□□ -0.25
SIL1-206ENST00000505353 CCER1Q8TC90 406 aaPredicted RBP13.47□□□□□ -0.25
SIL1-206ENST00000505353 SBNO1A3KN83 1393 aa13.46□□□□□ -0.25
SIL1-206ENST00000505353 COL22A1Q8NFW1 1626 aaPredicted RBP13.46□□□□□ -0.25
SIL1-206ENST00000505353 TESK2Q96S53 571 aa13.46□□□□□ -0.25
SIL1-206ENST00000505353 TOPAZ1Q8N9V7 1692 aa13.46□□□□□ -0.26
SIL1-206ENST00000505353 POLR3AO14802 1390 aaPredicted RBP13.45□□□□□ -0.26
SIL1-206ENST00000505353 CABP2Q9NPB3 220 aa13.45□□□□□ -0.26
SIL1-206ENST00000505353 TRPM3Q9HCF6 1732 aaPredicted RBP13.44□□□□□ -0.26
SIL1-206ENST00000505353 PSME1Q06323 249 aa13.43□□□□□ -0.26
SIL1-206ENST00000505353 EVC2Q86UK5 1308 aa13.42□□□□□ -0.26
SIL1-206ENST00000505353 ST20-MTHFSA0A0A6YYL1 179 aa13.42□□□□□ -0.26
SIL1-206ENST00000505353 POTEAQ6S8J7 498 aa13.42□□□□□ -0.26
SIL1-206ENST00000505353 ITSN1Q15811 1721 aa13.42□□□□□ -0.26
SIL1-206ENST00000505353 ACEP12821 1306 aa13.41□□□□□ -0.26
SIL1-206ENST00000505353 TNS3Q68CZ2 1445 aa13.41□□□□□ -0.26
SIL1-206ENST00000505353 NUTM2BA6NNL0 878 aaPredicted RBP13.41□□□□□ -0.26
SIL1-206ENST00000505353 NUTM2EB1AL46 878 aaPredicted RBP13.41□□□□□ -0.26
SIL1-206ENST00000505353 SRPK2P78362 688 aaKnown RBP13.41□□□□□ -0.26
SIL1-206ENST00000505353 NUTM2AQ8IVF1 878 aaPredicted RBP13.41□□□□□ -0.26
SIL1-206ENST00000505353 ALS2Q96Q42 1657 aa13.4□□□□□ -0.26
SIL1-206ENST00000505353 SSH2Q76I76 1423 aa13.4□□□□□ -0.26
SIL1-206ENST00000505353 NGDNQ8NEJ9 315 aaKnown RBP13.4□□□□□ -0.26
SIL1-206ENST00000505353 PUS7Q96PZ0 661 aaKnown RBP13.4□□□□□ -0.26
SIL1-206ENST00000505353 CABP1Q9NZU7 370 aa13.4□□□□□ -0.26
SIL1-206ENST00000505353 PPIP5K1Q6PFW1 1433 aa13.39□□□□□ -0.27
SIL1-206ENST00000505353 FNBP4Q8N3X1 1017 aaPredicted RBP13.38□□□□□ -0.27
SIL1-206ENST00000505353 ARHGEF10O15013 1369 aa13.37□□□□□ -0.27
SIL1-206ENST00000505353 USP47Q96K76 1375 aa13.37□□□□□ -0.27
SIL1-206ENST00000505353 CABLES1Q8TDN4 633 aa13.37□□□□□ -0.27
SIL1-206ENST00000505353 PHF23Q9BUL5 403 aaPredicted RBP13.37□□□□□ -0.27
SIL1-206ENST00000505353 CPSF1Q10570 1443 aaKnown RBP13.37□□□□□ -0.27
SIL1-206ENST00000505353 ADAMTS2O95450 1211 aa13.36□□□□□ -0.27
SIL1-206ENST00000505353 CD163L1Q9NR16 1453 aa13.36□□□□□ -0.27
SIL1-206ENST00000505353 ATAD2Q6PL18 1390 aa13.35□□□□□ -0.27
SIL1-206ENST00000505353 USP6P35125 1406 aa13.35□□□□□ -0.27
SIL1-206ENST00000505353 CRYBG1Q9Y4K1 1723 aa13.35□□□□□ -0.27
SIL1-206ENST00000505353 AFF2P51816 1311 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 529.9 ms