RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 ADAMTS2O95450 1211 aa16.53■□□□□ 0.24
UBE2D3-219ENST00000505207 NALCNQ8IZF0 1738 aa16.53■□□□□ 0.24
UBE2D3-219ENST00000505207 NPHP3Q7Z494 1330 aa16.52■□□□□ 0.24
UBE2D3-219ENST00000505207 ESCO1Q5FWF5 840 aa16.52■□□□□ 0.24
UBE2D3-219ENST00000505207 LRPPRCP42704 1394 aaKnown RBP16.51■□□□□ 0.23
UBE2D3-219ENST00000505207 SETD1AO15047 1707 aaKnown RBP16.51■□□□□ 0.23
UBE2D3-219ENST00000505207 STK26Q9P289 416 aa16.51■□□□□ 0.23
UBE2D3-219ENST00000505207 ADGRF5Q8IZF2 1346 aa16.5■□□□□ 0.23
UBE2D3-219ENST00000505207 USP21Q9UK80 565 aa16.49■□□□□ 0.23
UBE2D3-219ENST00000505207 TRPC5Q9UL62 973 aaPredicted RBP16.49■□□□□ 0.23
UBE2D3-219ENST00000505207 PPLO60437 1756 aa16.49■□□□□ 0.23
UBE2D3-219ENST00000505207 LAMC1P11047 1609 aa16.47■□□□□ 0.23
UBE2D3-219ENST00000505207 ABCC11Q96J66 1382 aa16.47■□□□□ 0.23
UBE2D3-219ENST00000505207 FOXO3O43524 673 aa16.46■□□□□ 0.23
UBE2D3-219ENST00000505207 WAPLQ7Z5K2 1190 aa16.46■□□□□ 0.23
UBE2D3-219ENST00000505207 FNBP4Q8N3X1 1017 aaPredicted RBP16.46■□□□□ 0.23
UBE2D3-219ENST00000505207 SIRT1Q96EB6 747 aa16.46■□□□□ 0.23
UBE2D3-219ENST00000505207 SPATA31E1Q6ZUB1 1445 aa16.45■□□□□ 0.22
UBE2D3-219ENST00000505207 TECPR2O15040 1411 aa16.45■□□□□ 0.22
UBE2D3-219ENST00000505207 CDC42BPGQ6DT37 1551 aa16.44■□□□□ 0.22
UBE2D3-219ENST00000505207 TMEM132EQ6IEE7 984 aa16.44■□□□□ 0.22
UBE2D3-219ENST00000505207 DHX57Q6P158 1386 aaKnown RBP16.42■□□□□ 0.22
UBE2D3-219ENST00000505207 NUTM2FA1L443 756 aa16.42■□□□□ 0.22
UBE2D3-219ENST00000505207 ATAD2Q6PL18 1390 aa16.41■□□□□ 0.22
UBE2D3-219ENST00000505207 C14orf93Q9H972 538 aaKnown RBP16.41■□□□□ 0.22
UBE2D3-219ENST00000505207 RGS12O14924 1447 aa16.41■□□□□ 0.22
UBE2D3-219ENST00000505207 PIK3C2GO75747 1445 aa16.4■□□□□ 0.22
UBE2D3-219ENST00000505207 YTHDC2Q9H6S0 1430 aaKnown RBP16.4■□□□□ 0.22
UBE2D3-219ENST00000505207 XPCQ01831 940 aaPredicted RBP16.4■□□□□ 0.22
UBE2D3-219ENST00000505207 PSME1Q06323 249 aa16.4■□□□□ 0.22
UBE2D3-219ENST00000505207 MYOM2P54296 1465 aa16.38■□□□□ 0.21
UBE2D3-219ENST00000505207 PXDNQ92626 1479 aa16.38■□□□□ 0.21
UBE2D3-219ENST00000505207 KRT28Q7Z3Y7 464 aa16.38■□□□□ 0.21
UBE2D3-219ENST00000505207 COL22A1Q8NFW1 1626 aaPredicted RBP16.37■□□□□ 0.21
UBE2D3-219ENST00000505207 HAP1P54257 671 aaPredicted RBP16.37■□□□□ 0.21
UBE2D3-219ENST00000505207 PLEKHH1Q9ULM0 1364 aa16.37■□□□□ 0.21
UBE2D3-219ENST00000505207 ATRNO75882 1429 aa16.36■□□□□ 0.21
UBE2D3-219ENST00000505207 CFAP70Q5T0N1 1121 aa16.36■□□□□ 0.21
UBE2D3-219ENST00000505207 CCDC125Q86Z20 511 aa16.36■□□□□ 0.21
UBE2D3-219ENST00000505207 POGKQ9P215 609 aa16.36■□□□□ 0.21
UBE2D3-219ENST00000505207 PHF8Q9UPP1 1060 aa16.36■□□□□ 0.21
UBE2D3-219ENST00000505207 SPATA31A3Q5VYP0 1347 aa16.36■□□□□ 0.21
UBE2D3-219ENST00000505207 GJD4Q96KN9 370 aaPredicted RBP16.35■□□□□ 0.21
UBE2D3-219ENST00000505207 KNDC1Q76NI1 1749 aa16.34■□□□□ 0.21
UBE2D3-219ENST00000505207 STAC3Q96MF2 364 aa16.34■□□□□ 0.21
UBE2D3-219ENST00000505207 IFT172Q9UG01 1749 aa16.33■□□□□ 0.21
UBE2D3-219ENST00000505207 UNC5CLQ8IV45 518 aa16.33■□□□□ 0.2
UBE2D3-219ENST00000505207 PRAM1Q96QH2 718 aa16.33■□□□□ 0.2
UBE2D3-219ENST00000505207 BCL9LQ86UU0 1499 aa16.32■□□□□ 0.2
UBE2D3-219ENST00000505207 KIF1AQ12756 1690 aa16.31■□□□□ 0.2
UBE2D3-219ENST00000505207 NRXN1Q9ULB1 1477 aa16.31■□□□□ 0.2
UBE2D3-219ENST00000505207 SAFB2Q14151 953 aaKnown RBP eCLIP16.31■□□□□ 0.2
UBE2D3-219ENST00000505207 LMOD2Q6P5Q4 547 aa16.31■□□□□ 0.2
UBE2D3-219ENST00000505207 RAB3GAP2Q9H2M9 1393 aa16.3■□□□□ 0.2
UBE2D3-219ENST00000505207 FMN2Q9NZ56 1722 aa16.3■□□□□ 0.2
UBE2D3-219ENST00000505207 SBNO1A3KN83 1393 aa16.29■□□□□ 0.2
UBE2D3-219ENST00000505207 ARHGEF10O15013 1369 aa16.29■□□□□ 0.2
UBE2D3-219ENST00000505207 ZRANB1Q9UGI0 708 aa16.29■□□□□ 0.2
UBE2D3-219ENST00000505207 EIF3AQ14152 1382 aaKnown RBP16.28■□□□□ 0.2
UBE2D3-219ENST00000505207 TNS3Q68CZ2 1445 aa16.28■□□□□ 0.2
UBE2D3-219ENST00000505207 HRCP23327 699 aa16.27■□□□□ 0.2
UBE2D3-219ENST00000505207 TRAK1Q9UPV9 953 aa16.27■□□□□ 0.2
UBE2D3-219ENST00000505207 KDM2AQ9Y2K7 1162 aa16.27■□□□□ 0.2
UBE2D3-219ENST00000505207 ANKARQ7Z5J8 1434 aa16.27■□□□□ 0.19
UBE2D3-219ENST00000505207 DLC1Q96QB1 1528 aa16.26■□□□□ 0.19
UBE2D3-219ENST00000505207 DCAF11Q8TEB1 546 aa16.26■□□□□ 0.19
UBE2D3-219ENST00000505207 CCDC9Q9Y3X0 531 aaKnown RBP16.26■□□□□ 0.19
UBE2D3-219ENST00000505207 GPRASP1Q5JY77 1395 aa16.26■□□□□ 0.19
UBE2D3-219ENST00000505207 MARF1Q9Y4F3 1742 aaKnown RBP16.25■□□□□ 0.19
UBE2D3-219ENST00000505207 SLIT2O94813 1529 aa16.25■□□□□ 0.19
UBE2D3-219ENST00000505207 VPS72Q15906 364 aa16.25■□□□□ 0.19
UBE2D3-219ENST00000505207 PMFBP1Q8TBY8 1022 aa16.25■□□□□ 0.19
UBE2D3-219ENST00000505207 PLEKHG5O94827 1062 aa16.24■□□□□ 0.19
UBE2D3-219ENST00000505207 SF3B2Q13435 895 aaKnown RBP16.24■□□□□ 0.19
UBE2D3-219ENST00000505207 CABLES1Q8TDN4 633 aa16.24■□□□□ 0.19
UBE2D3-219ENST00000505207 RALGAPBQ86X10 1494 aa16.23■□□□□ 0.19
UBE2D3-219ENST00000505207 WASLO00401 505 aaPredicted RBP16.22■□□□□ 0.19
UBE2D3-219ENST00000505207 HIRIP3Q9BW71 556 aaPredicted RBP16.22■□□□□ 0.19
UBE2D3-219ENST00000505207 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.22■□□□□ 0.19
UBE2D3-219ENST00000505207 MINK1Q8N4C8 1332 aaPredicted RBP16.21■□□□□ 0.19
UBE2D3-219ENST00000505207 USP32Q8NFA0 1604 aa16.21■□□□□ 0.19
UBE2D3-219ENST00000505207 SEPT12Q8IYM1 358 aa16.21■□□□□ 0.19
UBE2D3-219ENST00000505207 NGDNQ8NEJ9 315 aaKnown RBP16.21■□□□□ 0.19
UBE2D3-219ENST00000505207 ONECUT3O60422 494 aaPredicted RBP16.2■□□□□ 0.18
UBE2D3-219ENST00000505207 BLMP54132 1417 aaPredicted RBP16.19■□□□□ 0.18
UBE2D3-219ENST00000505207 FAM83GA6ND36 823 aa16.19■□□□□ 0.18
UBE2D3-219ENST00000505207 A0A0G2JS52 829 aa16.18■□□□□ 0.18
UBE2D3-219ENST00000505207 PAK3O75914 559 aaPredicted RBP16.18■□□□□ 0.18
UBE2D3-219ENST00000505207 MYT1Q01538 1121 aa16.18■□□□□ 0.18
UBE2D3-219ENST00000505207 KRT27Q7Z3Y8 459 aa16.18■□□□□ 0.18
UBE2D3-219ENST00000505207 RGPD8O14715 1765 aaPredicted RBP16.18■□□□□ 0.18
UBE2D3-219ENST00000505207 ADGRB1O14514 1584 aa16.17■□□□□ 0.18
UBE2D3-219ENST00000505207 ADGRB2O60241 1585 aa16.17■□□□□ 0.18
UBE2D3-219ENST00000505207 BTG4Q9NY30 223 aa16.16■□□□□ 0.18
UBE2D3-219ENST00000505207 GLI3P10071 1580 aa16.16■□□□□ 0.18
UBE2D3-219ENST00000505207 TULP4Q9NRJ4 1543 aa16.15■□□□□ 0.18
UBE2D3-219ENST00000505207 NWD2Q9ULI1 1742 aa16.15■□□□□ 0.18
UBE2D3-219ENST00000505207 NUDT16Q96DE0 195 aaKnown RBP16.14■□□□□ 0.17
UBE2D3-219ENST00000505207 PRR36Q9H6K5 1346 aa16.14■□□□□ 0.17
UBE2D3-219ENST00000505207 PRDM11Q9NQV5 511 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms