RNA–Protein interactions for RNA: ENST00000504982.1

PAPD4-208, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 2

Gene PAPD4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-208ENST00000504982 SMYD5Q6GMV2 418 aa7.48□□□□□ -1.21
PAPD4-208ENST00000504982 RNF19BQ6ZMZ0 732 aa7.48□□□□□ -1.21
PAPD4-208ENST00000504982 TRIM32Q13049 653 aa7.47□□□□□ -1.21
PAPD4-208ENST00000504982 SMPD1P17405 629 aa7.46□□□□□ -1.22
PAPD4-208ENST00000504982 NFX1Q12986 1120 aaKnown RBP7.46□□□□□ -1.22
PAPD4-208ENST00000504982 GRIPAP1Q4V328 841 aa7.46□□□□□ -1.22
PAPD4-208ENST00000504982 Q3C1V9 767 aa7.45□□□□□ -1.22
PAPD4-208ENST00000504982 SNIP1Q8TAD8 396 aaKnown RBP7.45□□□□□ -1.22
PAPD4-208ENST00000504982 PHOX2BQ99453 314 aa7.45□□□□□ -1.22
PAPD4-208ENST00000504982 ATP13A2Q9NQ11 1180 aa7.45□□□□□ -1.22
PAPD4-208ENST00000504982 STK17AQ9UEE5 414 aa7.45□□□□□ -1.22
PAPD4-208ENST00000504982 WIPF1O43516 503 aa7.44□□□□□ -1.22
PAPD4-208ENST00000504982 MMP16P51512 607 aa7.44□□□□□ -1.22
PAPD4-208ENST00000504982 MRGPRX2Q96LB1 330 aa7.43□□□□□ -1.22
PAPD4-208ENST00000504982 REPIN1Q9BWE0 567 aaKnown RBP7.43□□□□□ -1.22
PAPD4-208ENST00000504982 INSM1Q01101 510 aaPredicted RBP7.42□□□□□ -1.22
PAPD4-208ENST00000504982 GPIHBP1Q8IV16 184 aa7.42□□□□□ -1.22
PAPD4-208ENST00000504982 TRIM47Q96LD4 638 aa7.42□□□□□ -1.22
PAPD4-208ENST00000504982 J3QL48 77 aa7.41□□□□□ -1.22
PAPD4-208ENST00000504982 DXOO77932 396 aaKnown RBP7.41□□□□□ -1.22
PAPD4-208ENST00000504982 SNRPBP14678 240 aaKnown RBP7.41□□□□□ -1.22
PAPD4-208ENST00000504982 SENP2Q9HC62 589 aa7.41□□□□□ -1.22
PAPD4-208ENST00000504982 CD46P15529 392 aa7.4□□□□□ -1.22
PAPD4-208ENST00000504982 USB1Q9BQ65 265 aaKnown RBP7.39□□□□□ -1.23
PAPD4-208ENST00000504982 TERTO14746 1132 aaKnown RBP7.38□□□□□ -1.23
PAPD4-208ENST00000504982 KDM4AO75164 1064 aa7.38□□□□□ -1.23
PAPD4-208ENST00000504982 LCE2CQ5TA81 110 aa7.38□□□□□ -1.23
PAPD4-208ENST00000504982 HPS1Q92902 700 aa7.38□□□□□ -1.23
PAPD4-208ENST00000504982 KIFC2Q96AC6 838 aa7.38□□□□□ -1.23
PAPD4-208ENST00000504982 WNT7BP56706 349 aa7.37□□□□□ -1.23
PAPD4-208ENST00000504982 USP46P62068 366 aa7.37□□□□□ -1.23
PAPD4-208ENST00000504982 CCDC24Q8N4L8 307 aa7.36□□□□□ -1.23
PAPD4-208ENST00000504982 SKOR1P84550 965 aa7.35□□□□□ -1.23
PAPD4-208ENST00000504982 RC3H1Q5TC82 1133 aaKnown RBP7.35□□□□□ -1.23
PAPD4-208ENST00000504982 HLA-CQ95604 372 aa7.35□□□□□ -1.23
PAPD4-208ENST00000504982 HOXA2O43364 376 aa7.34□□□□□ -1.23
PAPD4-208ENST00000504982 MAP2K5Q13163 448 aa7.34□□□□□ -1.23
PAPD4-208ENST00000504982 JUNDP17535 347 aa7.33□□□□□ -1.24
PAPD4-208ENST00000504982 MDM2Q00987 491 aaPredicted RBP7.32□□□□□ -1.24
PAPD4-208ENST00000504982 ALDH1A1P00352 501 aa7.31□□□□□ -1.24
PAPD4-208ENST00000504982 GUCA2AQ02747 115 aa7.3□□□□□ -1.24
PAPD4-208ENST00000504982 SLC16A10Q8TF71 515 aa7.3□□□□□ -1.24
PAPD4-208ENST00000504982 SLC24A1O60721 1099 aa7.29□□□□□ -1.24
PAPD4-208ENST00000504982 BMP1P13497 986 aa7.29□□□□□ -1.24
PAPD4-208ENST00000504982 NUDT12Q9BQG2 462 aa7.29□□□□□ -1.24
PAPD4-208ENST00000504982 EHBP1Q8NDI1 1231 aa7.28□□□□□ -1.24
PAPD4-208ENST00000504982 FAM181BA6NEQ2 426 aa7.27□□□□□ -1.25
PAPD4-208ENST00000504982 IRF6O14896 467 aa7.27□□□□□ -1.25
PAPD4-208ENST00000504982 PLCB2Q00722 1185 aa7.27□□□□□ -1.25
PAPD4-208ENST00000504982 TRIM46Q7Z4K8 759 aa7.27□□□□□ -1.25
PAPD4-208ENST00000504982 RETREG3Q86VR2 466 aa7.27□□□□□ -1.25
PAPD4-208ENST00000504982 NXF1Q9UBU9 619 aaKnown RBP7.27□□□□□ -1.25
PAPD4-208ENST00000504982 WASF2Q9Y6W5 498 aa7.27□□□□□ -1.25
PAPD4-208ENST00000504982 CAPN5O15484 640 aaPredicted RBP7.26□□□□□ -1.25
PAPD4-208ENST00000504982 SIAH2O43255 324 aa7.26□□□□□ -1.25
PAPD4-208ENST00000504982 SYMPKQ92797 1274 aaKnown RBP7.26□□□□□ -1.25
PAPD4-208ENST00000504982 CCDC102AQ96A19 550 aa7.26□□□□□ -1.25
PAPD4-208ENST00000504982 GMPRP36959 345 aa7.25□□□□□ -1.25
PAPD4-208ENST00000504982 NPAS3Q8IXF0 933 aa7.25□□□□□ -1.25
PAPD4-208ENST00000504982 IRF7Q92985 503 aa7.25□□□□□ -1.25
PAPD4-208ENST00000504982 GPCPD1Q9NPB8 672 aa7.25□□□□□ -1.25
PAPD4-208ENST00000504982 MINK1Q8N4C8 1332 aaPredicted RBP7.25□□□□□ -1.25
PAPD4-208ENST00000504982 CLCN1P35523 988 aa7.24□□□□□ -1.25
PAPD4-208ENST00000504982 PTCRAQ6ISU1 281 aaPredicted RBP7.24□□□□□ -1.25
PAPD4-208ENST00000504982 NUTM1Q86Y26 1132 aa7.24□□□□□ -1.25
PAPD4-208ENST00000504982 FAM217BQ9NTX9 383 aaPredicted RBP7.24□□□□□ -1.25
PAPD4-208ENST00000504982 H3BM21 787 aa7.23□□□□□ -1.25
PAPD4-208ENST00000504982 TULP1O00294 542 aaPredicted RBP7.23□□□□□ -1.25
PAPD4-208ENST00000504982 CCNYL3P0C7X3 344 aa7.23□□□□□ -1.25
PAPD4-208ENST00000504982 MS4A1P11836 297 aa7.23□□□□□ -1.25
PAPD4-208ENST00000504982 TLL2Q9Y6L7 1015 aa7.23□□□□□ -1.25
PAPD4-208ENST00000504982 FDX1P10109 184 aa7.22□□□□□ -1.25
PAPD4-208ENST00000504982 SH3BP2P78314 561 aa7.22□□□□□ -1.25
PAPD4-208ENST00000504982 ZSCAN1Q8NBB4 408 aa7.22□□□□□ -1.25
PAPD4-208ENST00000504982 C6orf229H3BNL8 230 aa7.21□□□□□ -1.26
PAPD4-208ENST00000504982 LORP23490 312 aaPredicted RBP7.21□□□□□ -1.26
PAPD4-208ENST00000504982 VEGFBP49765 207 aa7.21□□□□□ -1.26
PAPD4-208ENST00000504982 PTPRNQ16849 979 aa7.21□□□□□ -1.26
PAPD4-208ENST00000504982 LINC01559Q495D7 138 aa7.2□□□□□ -1.26
PAPD4-208ENST00000504982 UNC93B1Q9H1C4 597 aa7.2□□□□□ -1.26
PAPD4-208ENST00000504982 PCDHGC3Q9UN70 934 aa7.2□□□□□ -1.26
PAPD4-208ENST00000504982 ERBB4Q15303 1308 aa7.2□□□□□ -1.26
PAPD4-208ENST00000504982 ZFP42Q96MM3 310 aa7.18□□□□□ -1.26
PAPD4-208ENST00000504982 NNTQ13423 1086 aa7.17□□□□□ -1.26
PAPD4-208ENST00000504982 KRI1Q8N9T8 703 aaKnown RBP7.17□□□□□ -1.26
PAPD4-208ENST00000504982 ZNF511Q8NB15 262 aa7.17□□□□□ -1.26
PAPD4-208ENST00000504982 PLEKHG3A1L390 1219 aa7.16□□□□□ -1.26
PAPD4-208ENST00000504982 VARSP26640 1264 aaKnown RBP7.16□□□□□ -1.26
PAPD4-208ENST00000504982 KCNH2Q12809 1159 aa7.16□□□□□ -1.26
PAPD4-208ENST00000504982 MRPL14Q6P1L8 145 aaKnown RBP7.16□□□□□ -1.26
PAPD4-208ENST00000504982 BAP1Q92560 729 aa7.16□□□□□ -1.26
PAPD4-208ENST00000504982 EVA1BQ9NVM1 165 aa7.16□□□□□ -1.26
PAPD4-208ENST00000504982 ADH1CP00326 375 aa7.15□□□□□ -1.26
PAPD4-208ENST00000504982 TIMP2P16035 220 aa7.15□□□□□ -1.26
PAPD4-208ENST00000504982 HAP1P54257 671 aaPredicted RBP7.15□□□□□ -1.26
PAPD4-208ENST00000504982 SCARF1Q14162 830 aa7.15□□□□□ -1.26
PAPD4-208ENST00000504982 MPNDQ8N594 471 aa7.15□□□□□ -1.26
PAPD4-208ENST00000504982 PRR7Q8TB68 274 aa7.14□□□□□ -1.27
PAPD4-208ENST00000504982 SPIRE2Q8WWL2 714 aa7.14□□□□□ -1.27
PAPD4-208ENST00000504982 PURBQ96QR8 312 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms