RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 AMHR2Q16671 573 aa6.79□□□□□ -1.32
RFC1-209ENST00000504974 TMEM132AQ24JP5 1023 aa6.79□□□□□ -1.32
RFC1-209ENST00000504974 Q6ZNB5 142 aa6.79□□□□□ -1.32
RFC1-209ENST00000504974 ANKLE1Q8NAG6 615 aa6.79□□□□□ -1.32
RFC1-209ENST00000504974 IL27Q8NEV9 243 aa6.79□□□□□ -1.32
RFC1-209ENST00000504974 V9GY48 417 aaPredicted RBP6.79□□□□□ -1.32
RFC1-209ENST00000504974 SPRYD7Q5W111 196 aa6.78□□□□□ -1.32
RFC1-209ENST00000504974 SPIRE2Q8WWL2 714 aa6.78□□□□□ -1.32
RFC1-209ENST00000504974 BEGAINQ9BUH8 593 aa6.78□□□□□ -1.32
RFC1-209ENST00000504974 PDZRN3Q9UPQ7 1066 aa6.78□□□□□ -1.32
RFC1-209ENST00000504974 MOXD2PA6NHM9 499 aa6.77□□□□□ -1.33
RFC1-209ENST00000504974 TNFRSF10AO00220 468 aa6.77□□□□□ -1.33
RFC1-209ENST00000504974 NUTM1Q86Y26 1132 aa6.77□□□□□ -1.33
RFC1-209ENST00000504974 FOXC1Q12948 553 aa6.75□□□□□ -1.33
RFC1-209ENST00000504974 GRIPAP1Q4V328 841 aa6.75□□□□□ -1.33
RFC1-209ENST00000504974 ZNF697Q5TEC3 545 aa6.75□□□□□ -1.33
RFC1-209ENST00000504974 FAM117AQ9C073 453 aa6.75□□□□□ -1.33
RFC1-209ENST00000504974 FDX1P10109 184 aa6.74□□□□□ -1.33
RFC1-209ENST00000504974 CCDC24Q8N4L8 307 aa6.74□□□□□ -1.33
RFC1-209ENST00000504974 USB1Q9BQ65 265 aaKnown RBP6.74□□□□□ -1.33
RFC1-209ENST00000504974 SALL2Q9Y467 1007 aaPredicted RBP6.74□□□□□ -1.33
RFC1-209ENST00000504974 USP46P62068 366 aa6.73□□□□□ -1.33
RFC1-209ENST00000504974 ZNF598Q86UK7 904 aaKnown RBP6.73□□□□□ -1.33
RFC1-209ENST00000504974 TBC1D2Q9BYX2 928 aa6.73□□□□□ -1.33
RFC1-209ENST00000504974 PCDHB15Q9Y5E8 787 aa6.73□□□□□ -1.33
RFC1-209ENST00000504974 C6orf229H3BNL8 230 aa6.72□□□□□ -1.33
RFC1-209ENST00000504974 CSPP1Q1MSJ5 1256 aa6.72□□□□□ -1.33
RFC1-209ENST00000504974 Q3C1V9 767 aa6.72□□□□□ -1.33
RFC1-209ENST00000504974 MSS51Q4VC12 460 aa6.72□□□□□ -1.33
RFC1-209ENST00000504974 DDRGK1Q96HY6 314 aa6.72□□□□□ -1.33
RFC1-209ENST00000504974 PKD2L1Q9P0L9 805 aa6.72□□□□□ -1.33
RFC1-209ENST00000504974 NRG2O14511 850 aaPredicted RBP6.71□□□□□ -1.34
RFC1-209ENST00000504974 GDF9O60383 454 aa6.71□□□□□ -1.34
RFC1-209ENST00000504974 DXOO77932 396 aaKnown RBP6.71□□□□□ -1.34
RFC1-209ENST00000504974 MMP16P51512 607 aa6.7□□□□□ -1.34
RFC1-209ENST00000504974 PTCRAQ6ISU1 281 aaPredicted RBP6.7□□□□□ -1.34
RFC1-209ENST00000504974 CABLES1Q8TDN4 633 aa6.7□□□□□ -1.34
RFC1-209ENST00000504974 ATP1B4Q9UN42 357 aaPredicted RBP6.7□□□□□ -1.34
RFC1-209ENST00000504974 GTF3C3Q9Y5Q9 886 aa6.7□□□□□ -1.34
RFC1-209ENST00000504974 PLEKHG3A1L390 1219 aa6.69□□□□□ -1.34
RFC1-209ENST00000504974 TRAF7Q6Q0C0 670 aa6.69□□□□□ -1.34
RFC1-209ENST00000504974 LIMD1Q9UGP4 676 aa6.68□□□□□ -1.34
RFC1-209ENST00000504974 JUNDP17535 347 aa6.67□□□□□ -1.34
RFC1-209ENST00000504974 RSBN1LQ6PCB5 846 aaPredicted RBP6.67□□□□□ -1.34
RFC1-209ENST00000504974 RETREG3Q86VR2 466 aa6.67□□□□□ -1.34
RFC1-209ENST00000504974 PRR7Q8TB68 274 aa6.67□□□□□ -1.34
RFC1-209ENST00000504974 FAM187AA6NFU0 413 aa6.66□□□□□ -1.34
RFC1-209ENST00000504974 CFAP99D6REC4 459 aa6.66□□□□□ -1.34
RFC1-209ENST00000504974 ZBTB24O43167 697 aaPredicted RBP6.66□□□□□ -1.34
RFC1-209ENST00000504974 RPIAP49247 311 aa6.66□□□□□ -1.34
RFC1-209ENST00000504974 SKOR1P84550 965 aa6.66□□□□□ -1.34
RFC1-209ENST00000504974 TRIM32Q13049 653 aa6.66□□□□□ -1.34
RFC1-209ENST00000504974 QPCTQ16769 361 aa6.66□□□□□ -1.34
RFC1-209ENST00000504974 MYSM1Q5VVJ2 828 aa6.66□□□□□ -1.34
RFC1-209ENST00000504974 RIC3Q7Z5B4 369 aa6.66□□□□□ -1.34
RFC1-209ENST00000504974 POLR3EQ9NVU0 708 aa6.66□□□□□ -1.34
RFC1-209ENST00000504974 ST8SIA5O15466 376 aa6.65□□□□□ -1.34
RFC1-209ENST00000504974 CD2BP2O95400 341 aaKnown RBP6.65□□□□□ -1.34
RFC1-209ENST00000504974 HRCP23327 699 aa6.65□□□□□ -1.34
RFC1-209ENST00000504974 LAPTM4AQ15012 233 aa6.65□□□□□ -1.34
RFC1-209ENST00000504974 FBXO31Q5XUX0 539 aaPredicted RBP6.65□□□□□ -1.34
RFC1-209ENST00000504974 NUDT12Q9BQG2 462 aa6.65□□□□□ -1.34
RFC1-209ENST00000504974 POTECB2RU33 542 aa6.64□□□□□ -1.35
RFC1-209ENST00000504974 SPTLC1O15269 473 aa6.64□□□□□ -1.35
RFC1-209ENST00000504974 MTMR2Q13614 643 aa6.64□□□□□ -1.35
RFC1-209ENST00000504974 PKDCCQ504Y2 493 aa6.64□□□□□ -1.35
RFC1-209ENST00000504974 DACH1Q9UI36 760 aa6.64□□□□□ -1.35
RFC1-209ENST00000504974 PER1O15534 1290 aaPredicted RBP6.63□□□□□ -1.35
RFC1-209ENST00000504974 PRR20EP86478 221 aa6.63□□□□□ -1.35
RFC1-209ENST00000504974 PRR20CP86479 221 aa6.63□□□□□ -1.35
RFC1-209ENST00000504974 PRR20DP86480 221 aa6.63□□□□□ -1.35
RFC1-209ENST00000504974 PRR20BP86481 221 aa6.63□□□□□ -1.35
RFC1-209ENST00000504974 PRR20AP86496 221 aa6.63□□□□□ -1.35
RFC1-209ENST00000504974 MYT1Q01538 1121 aa6.63□□□□□ -1.35
RFC1-209ENST00000504974 RTL5Q5HYW3 569 aaPredicted RBP6.63□□□□□ -1.35
RFC1-209ENST00000504974 TSC1Q92574 1164 aa6.63□□□□□ -1.35
RFC1-209ENST00000504974 MRGPRX2Q96LB1 330 aa6.63□□□□□ -1.35
RFC1-209ENST00000504974 J3QL48 77 aa6.62□□□□□ -1.35
RFC1-209ENST00000504974 LINC01559Q495D7 138 aa6.62□□□□□ -1.35
RFC1-209ENST00000504974 PCMTD1Q96MG8 357 aaPredicted RBP6.62□□□□□ -1.35
RFC1-209ENST00000504974 RSPH6AQ9H0K4 717 aa6.62□□□□□ -1.35
RFC1-209ENST00000504974 TOR4AQ9NXH8 423 aa6.62□□□□□ -1.35
RFC1-209ENST00000504974 RC3H1Q5TC82 1133 aaKnown RBP6.61□□□□□ -1.35
RFC1-209ENST00000504974 PROCA1Q8NCQ7 364 aaPredicted RBP6.61□□□□□ -1.35
RFC1-209ENST00000504974 NUTM2BA6NNL0 878 aaPredicted RBP6.6□□□□□ -1.35
RFC1-209ENST00000504974 NUTM2EB1AL46 878 aaPredicted RBP6.6□□□□□ -1.35
RFC1-209ENST00000504974 CCNYL3P0C7X3 344 aa6.6□□□□□ -1.35
RFC1-209ENST00000504974 SH3D19Q5HYK7 790 aa6.6□□□□□ -1.35
RFC1-209ENST00000504974 NUTM2DQ5VT03 806 aaPredicted RBP6.6□□□□□ -1.35
RFC1-209ENST00000504974 NUTM2AQ8IVF1 878 aaPredicted RBP6.6□□□□□ -1.35
RFC1-209ENST00000504974 CYP4X1Q8N118 509 aa6.6□□□□□ -1.35
RFC1-209ENST00000504974 BAP1Q92560 729 aa6.6□□□□□ -1.35
RFC1-209ENST00000504974 MAP10Q9P2G4 905 aa6.6□□□□□ -1.35
RFC1-209ENST00000504974 TTC24A2A3L6 582 aaPredicted RBP6.59□□□□□ -1.35
RFC1-209ENST00000504974 CTHP32929 405 aa6.59□□□□□ -1.35
RFC1-209ENST00000504974 SH3BP2P78314 561 aa6.59□□□□□ -1.35
RFC1-209ENST00000504974 UNC93B1Q9H1C4 597 aa6.59□□□□□ -1.35
RFC1-209ENST00000504974 ZBTB3Q9H5J0 574 aa6.59□□□□□ -1.35
RFC1-209ENST00000504974 EVA1BQ9NVM1 165 aa6.59□□□□□ -1.35
RFC1-209ENST00000504974 WNT7AO00755 349 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms