RNA–Protein interactions for RNA: ENST00000504959.5

SNX25-203, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 1,868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-203ENST00000504959 KHSRPQ92945 711 aaKnown RBP eCLIP8.28□□□□□ -1.082e-7■■■■□ 26
SNX25-203ENST00000504959 TDRD9Q8NDG6 1382 aaKnown RBP8.28□□□□□ -1.08
SNX25-203ENST00000504959 POM121CA8CG34 1229 aa8.28□□□□□ -1.08
SNX25-203ENST00000504959 PPP2R2DQ66LE6 453 aa8.28□□□□□ -1.08
SNX25-203ENST00000504959 MAP3K1Q13233 1512 aa8.27□□□□□ -1.09
SNX25-203ENST00000504959 TMEM259Q4ZIN3 620 aa8.27□□□□□ -1.09
SNX25-203ENST00000504959 GZF1Q9H116 711 aaPredicted RBP8.27□□□□□ -1.09
SNX25-203ENST00000504959 MTMR7Q9Y216 660 aa8.27□□□□□ -1.09
SNX25-203ENST00000504959 PBRM1Q86U86 1689 aa8.27□□□□□ -1.09
SNX25-203ENST00000504959 CFAP43Q8NDM7 1665 aa8.27□□□□□ -1.09
SNX25-203ENST00000504959 PCF11O94913 1555 aaKnown RBP8.26□□□□□ -1.09
SNX25-203ENST00000504959 CALR3Q96L12 384 aaKnown RBP8.26□□□□□ -1.09
SNX25-203ENST00000504959 TARBP1Q13395 1621 aaKnown RBP8.26□□□□□ -1.09
SNX25-203ENST00000504959 RRBP1Q9P2E9 1410 aaKnown RBP8.26□□□□□ -1.09
SNX25-203ENST00000504959 ABL2P42684 1182 aa8.26□□□□□ -1.09
SNX25-203ENST00000504959 TMCO4Q5TGY1 634 aa8.26□□□□□ -1.09
SNX25-203ENST00000504959 GLMNQ92990 594 aa8.26□□□□□ -1.09
SNX25-203ENST00000504959 RIC3Q7Z5B4 369 aa8.25□□□□□ -1.09
SNX25-203ENST00000504959 SPIRE2Q8WWL2 714 aa8.25□□□□□ -1.09
SNX25-203ENST00000504959 TBC1D2BQ9UPU7 963 aa8.25□□□□□ -1.09
SNX25-203ENST00000504959 CCNB3Q8WWL7 1395 aa8.25□□□□□ -1.09
SNX25-203ENST00000504959 FHOD3Q2V2M9 1422 aa8.24□□□□□ -1.09
SNX25-203ENST00000504959 TTC13Q8NBP0 860 aa8.24□□□□□ -1.09
SNX25-203ENST00000504959 FBXW7Q969H0 707 aa8.24□□□□□ -1.09
SNX25-203ENST00000504959 LRRC9Q6ZRR7 1453 aa8.24□□□□□ -1.09
SNX25-203ENST00000504959 FYCO1Q9BQS8 1478 aa8.24□□□□□ -1.09
SNX25-203ENST00000504959 PPP1R15AO75807 674 aaPredicted RBP8.23□□□□□ -1.09
SNX25-203ENST00000504959 MFAP1P55081 439 aaKnown RBP8.23□□□□□ -1.09
SNX25-203ENST00000504959 DIXDC1Q155Q3 683 aa8.23□□□□□ -1.09
SNX25-203ENST00000504959 CSPP1Q1MSJ5 1256 aa8.23□□□□□ -1.09
SNX25-203ENST00000504959 C6orf132Q5T0Z8 1188 aa8.23□□□□□ -1.09
SNX25-203ENST00000504959 JPH4Q96JJ6 628 aa8.23□□□□□ -1.09
SNX25-203ENST00000504959 ITGAEP38570 1179 aa8.23□□□□□ -1.09
SNX25-203ENST00000504959 QPCTQ16769 361 aa8.23□□□□□ -1.09
SNX25-203ENST00000504959 PCDHGA4Q9Y5G9 962 aa8.23□□□□□ -1.09
SNX25-203ENST00000504959 FMN1Q68DA7 1419 aa8.23□□□□□ -1.09
SNX25-203ENST00000504959 KDM4FA0A1W2PPD8 638 aa8.21□□□□□ -1.09
SNX25-203ENST00000504959 NUDT7P0C024 238 aa8.21□□□□□ -1.09
SNX25-203ENST00000504959 FOXD4L5Q5VV16 416 aaPredicted RBP8.21□□□□□ -1.09
SNX25-203ENST00000504959 CERKQ8TCT0 537 aa8.21□□□□□ -1.09
SNX25-203ENST00000504959 FOXD4L4Q8WXT5 416 aaPredicted RBP8.21□□□□□ -1.09
SNX25-203ENST00000504959 ZNF428Q96B54 188 aa8.21□□□□□ -1.09
SNX25-203ENST00000504959 CASKIN1Q8WXD9 1431 aa8.21□□□□□ -1.09
SNX25-203ENST00000504959 AQRO60306 1485 aaKnown RBP eCLIP8.21□□□□□ -1.09
SNX25-203ENST00000504959 DIEXFQ68CQ4 756 aaKnown RBP8.21□□□□□ -1.1
SNX25-203ENST00000504959 SAMD9Q5K651 1589 aa8.2□□□□□ -1.1
SNX25-203ENST00000504959 RSBN1LQ6PCB5 846 aaPredicted RBP8.2□□□□□ -1.1
SNX25-203ENST00000504959 RBM27Q9P2N5 1060 aaKnown RBP8.2□□□□□ -1.1
SNX25-203ENST00000504959 IFT140Q96RY7 1462 aa8.2□□□□□ -1.1
SNX25-203ENST00000504959 MOXD2PA6NHM9 499 aa8.19□□□□□ -1.1
SNX25-203ENST00000504959 SPTLC1O15269 473 aa8.19□□□□□ -1.1
SNX25-203ENST00000504959 FOSBP53539 338 aa8.19□□□□□ -1.1
SNX25-203ENST00000504959 RNF166Q96A37 237 aaPredicted RBP8.19□□□□□ -1.1
SNX25-203ENST00000504959 CLSPNQ9HAW4 1339 aa8.19□□□□□ -1.1
SNX25-203ENST00000504959 AP1G2O75843 785 aa8.19□□□□□ -1.1
SNX25-203ENST00000504959 CD46P15529 392 aa8.19□□□□□ -1.1
SNX25-203ENST00000504959 WWC1Q8IX03 1113 aa8.19□□□□□ -1.1
SNX25-203ENST00000504959 RBM46Q8TBY0 533 aaKnown RBP8.19□□□□□ -1.1
SNX25-203ENST00000504959 ADAMTS19Q8TE59 1207 aa8.19□□□□□ -1.1
SNX25-203ENST00000504959 ACIN1Q9UKV3 1341 aaKnown RBP8.19□□□□□ -1.1
SNX25-203ENST00000504959 FAM50AQ14320 339 aaKnown RBP8.18□□□□□ -1.1
SNX25-203ENST00000504959 TUSC1Q2TAM9 212 aa8.18□□□□□ -1.1
SNX25-203ENST00000504959 MYT1LQ9UL68 1186 aa8.18□□□□□ -1.1
SNX25-203ENST00000504959 LHX6Q9UPM6 363 aa8.18□□□□□ -1.1
SNX25-203ENST00000504959 PCDHB15Q9Y5E8 787 aa8.18□□□□□ -1.1
SNX25-203ENST00000504959 GRIN2BQ13224 1484 aa8.18□□□□□ -1.1
SNX25-203ENST00000504959 ADAMTS12P58397 1594 aa8.17□□□□□ -1.1
SNX25-203ENST00000504959 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.17□□□□□ -1.1
SNX25-203ENST00000504959 NDUFV2P19404 249 aa8.17□□□□□ -1.1
SNX25-203ENST00000504959 RTL5Q5HYW3 569 aaPredicted RBP8.17□□□□□ -1.1
SNX25-203ENST00000504959 CDCA7LQ96GN5 454 aa8.17□□□□□ -1.1
SNX25-203ENST00000504959 FAM198AQ9UFP1 575 aa8.17□□□□□ -1.1
SNX25-203ENST00000504959 DHX57Q6P158 1386 aaKnown RBP8.17□□□□□ -1.1
SNX25-203ENST00000504959 PHLDB1Q86UU1 1377 aa8.17□□□□□ -1.1
SNX25-203ENST00000504959 LRRIQ1Q96JM4 1722 aa8.17□□□□□ -1.1
SNX25-203ENST00000504959 RCCD1A6NED2 376 aa8.17□□□□□ -1.1
SNX25-203ENST00000504959 SOCS7O14512 581 aa8.17□□□□□ -1.1
SNX25-203ENST00000504959 LILRB3O75022 631 aa8.17□□□□□ -1.1
SNX25-203ENST00000504959 USP17L8P0C7I0 530 aa8.17□□□□□ -1.1
SNX25-203ENST00000504959 PRSS12P56730 875 aa8.17□□□□□ -1.1
SNX25-203ENST00000504959 IQGAP2Q13576 1575 aa8.16□□□□□ -1.1
SNX25-203ENST00000504959 CARNS1A5YM72 827 aa8.16□□□□□ -1.1
SNX25-203ENST00000504959 RFX1P22670 979 aa8.16□□□□□ -1.1
SNX25-203ENST00000504959 ZNF454Q8N9F8 522 aa8.16□□□□□ -1.1
SNX25-203ENST00000504959 ZDHHC16Q969W1 377 aa8.16□□□□□ -1.1
SNX25-203ENST00000504959 ADAM33Q9BZ11 813 aa8.16□□□□□ -1.1
SNX25-203ENST00000504959 SNAPC4Q5SXM2 1469 aa8.16□□□□□ -1.1
SNX25-203ENST00000504959 PBX2P40425 430 aa8.15□□□□□ -1.1
SNX25-203ENST00000504959 LSM11P83369 360 aaKnown RBP eCLIP8.15□□□□□ -1.1
SNX25-203ENST00000504959 ANKRD13DQ6ZTN6 518 aa8.15□□□□□ -1.1
SNX25-203ENST00000504959 PBXIP1Q96AQ6 731 aa8.15□□□□□ -1.1
SNX25-203ENST00000504959 GJD4Q96KN9 370 aaPredicted RBP8.15□□□□□ -1.1
SNX25-203ENST00000504959 MTUS2Q5JR59 1369 aa8.15□□□□□ -1.1
SNX25-203ENST00000504959 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.15□□□□□ -1.11
SNX25-203ENST00000504959 RBM25P49756 843 aaKnown RBP8.15□□□□□ -1.11
SNX25-203ENST00000504959 HDGFL1Q5TGJ6 251 aa8.15□□□□□ -1.11
SNX25-203ENST00000504959 POTEEQ6S8J3 1075 aa8.15□□□□□ -1.11
SNX25-203ENST00000504959 NUTM1Q86Y26 1132 aa8.15□□□□□ -1.11
SNX25-203ENST00000504959 CABLES1Q8TDN4 633 aa8.15□□□□□ -1.11
SNX25-203ENST00000504959 SUPT6HQ7KZ85 1726 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms