RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-255ENST00000504927 DISP3Q9P2K9 1392 aa29.67■■■□□ 2.34
DDR1-255ENST00000504927 MED1Q15648 1581 aaPredicted RBP29.67■■■□□ 2.34
DDR1-255ENST00000504927 DLC1Q96QB1 1528 aa29.66■■■□□ 2.34
DDR1-255ENST00000504927 PLEKHH1Q9ULM0 1364 aa29.66■■■□□ 2.34
DDR1-255ENST00000504927 PHLPP1O60346 1717 aa29.65■■■□□ 2.34
DDR1-255ENST00000504927 KIAA1210Q9ULL0 1709 aa29.63■■■□□ 2.33
DDR1-255ENST00000504927 NBPF1Q3BBV0 1214 aa29.63■■■□□ 2.33
DDR1-255ENST00000504927 BRINP3Q76B58 766 aa29.62■■■□□ 2.33
DDR1-255ENST00000504927 COL16A1Q07092 1604 aaPredicted RBP29.62■■■□□ 2.33
DDR1-255ENST00000504927 AHDC1Q5TGY3 1603 aaPredicted RBP29.6■■■□□ 2.33
DDR1-255ENST00000504927 SAFB2Q14151 953 aaKnown RBP eCLIP29.59■■■□□ 2.33
DDR1-255ENST00000504927 C1orf167Q5SNV9 1468 aa29.58■■■□□ 2.33
DDR1-255ENST00000504927 CDC42BPGQ6DT37 1551 aa29.57■■■□□ 2.32
DDR1-255ENST00000504927 TIMELESSQ9UNS1 1208 aa29.55■■■□□ 2.32
DDR1-255ENST00000504927 NHSL1Q5SYE7 1610 aa29.53■■■□□ 2.32
DDR1-255ENST00000504927 NBPF8Q3BBV2 869 aa29.53■■■□□ 2.32
DDR1-255ENST00000504927 CCER1Q8TC90 406 aaPredicted RBP29.53■■■□□ 2.32
DDR1-255ENST00000504927 ORAI2Q96SN7 254 aa29.51■■■□□ 2.31
DDR1-255ENST00000504927 ROCK2O75116 1388 aaKnown RBP29.51■■■□□ 2.31
DDR1-255ENST00000504927 ESCO1Q5FWF5 840 aa29.5■■■□□ 2.31
DDR1-255ENST00000504927 DDX17Q92841 729 aaKnown RBP29.49■■■□□ 2.31
DDR1-255ENST00000504927 MINK1Q8N4C8 1332 aaPredicted RBP29.48■■■□□ 2.31
DDR1-255ENST00000504927 NUTM2FA1L443 756 aa29.47■■■□□ 2.31
DDR1-255ENST00000504927 ILDR2Q71H61 639 aa29.47■■■□□ 2.31
DDR1-255ENST00000504927 HIRIP3Q9BW71 556 aaPredicted RBP29.46■■■□□ 2.31
DDR1-255ENST00000504927 FMN2Q9NZ56 1722 aa29.45■■■□□ 2.31
DDR1-255ENST00000504927 JCADQ9P266 1359 aa29.45■■■□□ 2.31
DDR1-255ENST00000504927 WASLO00401 505 aaPredicted RBP29.45■■■□□ 2.31
DDR1-255ENST00000504927 TRPM1Q7Z4N2 1603 aa29.45■■■□□ 2.3
DDR1-255ENST00000504927 EIF3AQ14152 1382 aaKnown RBP29.43■■■□□ 2.3
DDR1-255ENST00000504927 LRRC59Q96AG4 307 aaKnown RBP29.43■■■□□ 2.3
DDR1-255ENST00000504927 CENPJQ9HC77 1338 aaPredicted RBP29.43■■■□□ 2.3
DDR1-255ENST00000504927 GPRASP1Q5JY77 1395 aa29.42■■■□□ 2.3
DDR1-255ENST00000504927 ADGRB2O60241 1585 aa29.42■■■□□ 2.3
DDR1-255ENST00000504927 ARHGEF28Q8N1W1 1705 aaKnown RBP29.42■■■□□ 2.3
DDR1-255ENST00000504927 SHPRHQ149N8 1683 aa29.41■■■□□ 2.3
DDR1-255ENST00000504927 CARD11Q9BXL7 1154 aa29.4■■■□□ 2.3
DDR1-255ENST00000504927 NPHP3Q7Z494 1330 aa29.4■■■□□ 2.3
DDR1-255ENST00000504927 ANKARQ7Z5J8 1434 aa29.39■■■□□ 2.3
DDR1-255ENST00000504927 SOS2Q07890 1332 aaPredicted RBP29.38■■■□□ 2.29
DDR1-255ENST00000504927 LRP6O75581 1613 aa29.38■■■□□ 2.29
DDR1-255ENST00000504927 FOXO3O43524 673 aa29.37■■■□□ 2.29
DDR1-255ENST00000504927 PHF8Q9UPP1 1060 aa29.37■■■□□ 2.29
DDR1-255ENST00000504927 CDK19Q9BWU1 502 aa29.36■■■□□ 2.29
DDR1-255ENST00000504927 RALGAPBQ86X10 1494 aa29.36■■■□□ 2.29
DDR1-255ENST00000504927 PHF23Q9BUL5 403 aaPredicted RBP29.34■■■□□ 2.29
DDR1-255ENST00000504927 RGPD8O14715 1765 aaPredicted RBP29.34■■■□□ 2.29
DDR1-255ENST00000504927 USP32Q8NFA0 1604 aa29.32■■■□□ 2.28
DDR1-255ENST00000504927 SPATA31A6Q5VVP1 1343 aa29.32■■■□□ 2.28
DDR1-255ENST00000504927 RGS17Q9UGC6 210 aaPredicted RBP29.31■■■□□ 2.28
DDR1-255ENST00000504927 TULP4Q9NRJ4 1543 aa29.3■■■□□ 2.28
DDR1-255ENST00000504927 NUDT16Q96DE0 195 aaKnown RBP29.3■■■□□ 2.28
DDR1-255ENST00000504927 PRR36Q9H6K5 1346 aa29.29■■■□□ 2.28
DDR1-255ENST00000504927 PSME1Q06323 249 aa29.29■■■□□ 2.28
DDR1-255ENST00000504927 PXDNQ92626 1479 aa29.29■■■□□ 2.28
DDR1-255ENST00000504927 PNPLA6Q8IY17 1366 aa29.28■■■□□ 2.28
DDR1-255ENST00000504927 KRT28Q7Z3Y7 464 aa29.27■■■□□ 2.28
DDR1-255ENST00000504927 CCDC61Q9Y6R9 512 aa29.27■■■□□ 2.28
DDR1-255ENST00000504927 EVC2Q86UK5 1308 aa29.26■■■□□ 2.27
DDR1-255ENST00000504927 KIF1AQ12756 1690 aa29.26■■■□□ 2.27
DDR1-255ENST00000504927 SRPK2P78362 688 aaKnown RBP29.26■■■□□ 2.27
DDR1-255ENST00000504927 XPCQ01831 940 aaPredicted RBP29.26■■■□□ 2.27
DDR1-255ENST00000504927 PMFBP1Q8TBY8 1022 aa29.26■■■□□ 2.27
DDR1-255ENST00000504927 NGDNQ8NEJ9 315 aaKnown RBP29.22■■■□□ 2.27
DDR1-255ENST00000504927 NUTM2BA6NNL0 878 aaPredicted RBP29.21■■■□□ 2.27
DDR1-255ENST00000504927 NUTM2EB1AL46 878 aaPredicted RBP29.21■■■□□ 2.27
DDR1-255ENST00000504927 SLC24A1O60721 1099 aa29.21■■■□□ 2.27
DDR1-255ENST00000504927 NUTM2AQ8IVF1 878 aaPredicted RBP29.21■■■□□ 2.27
DDR1-255ENST00000504927 PLEKHG3A1L390 1219 aa29.2■■■□□ 2.26
DDR1-255ENST00000504927 CABP2Q9NPB3 220 aa29.2■■■□□ 2.26
DDR1-255ENST00000504927 SBNO2Q9Y2G9 1366 aa29.2■■■□□ 2.26
DDR1-255ENST00000504927 ATP7BP35670 1465 aa29.2■■■□□ 2.26
DDR1-255ENST00000504927 QRICH2Q9H0J4 1663 aa29.2■■■□□ 2.26
DDR1-255ENST00000504927 SPATA31A3Q5VYP0 1347 aa29.18■■■□□ 2.26
DDR1-255ENST00000504927 SBNO1A3KN83 1393 aa29.17■■■□□ 2.26
DDR1-255ENST00000504927 COL22A1Q8NFW1 1626 aaPredicted RBP29.17■■■□□ 2.26
DDR1-255ENST00000504927 MEX3CQ5U5Q3 659 aaKnown RBP29.15■■■□□ 2.26
DDR1-255ENST00000504927 ST20-MTHFSA0A0A6YYL1 179 aa29.14■■■□□ 2.26
DDR1-255ENST00000504927 POTEAQ6S8J7 498 aa29.14■■■□□ 2.26
DDR1-255ENST00000504927 POLR3AO14802 1390 aaPredicted RBP29.12■■■□□ 2.25
DDR1-255ENST00000504927 ACEP12821 1306 aa29.11■■■□□ 2.25
DDR1-255ENST00000504927 ITSN1Q15811 1721 aa29.11■■■□□ 2.25
DDR1-255ENST00000504927 PUS7Q96PZ0 661 aaKnown RBP29.1■■■□□ 2.25
DDR1-255ENST00000504927 CABP1Q9NZU7 370 aa29.1■■■□□ 2.25
DDR1-255ENST00000504927 TNS3Q68CZ2 1445 aa29.1■■■□□ 2.25
DDR1-255ENST00000504927 PPIP5K1Q6PFW1 1433 aa29.1■■■□□ 2.25
DDR1-255ENST00000504927 ARHGEF10O15013 1369 aa29.09■■■□□ 2.25
DDR1-255ENST00000504927 LMOD2Q6P5Q4 547 aa29.08■■■□□ 2.25
DDR1-255ENST00000504927 TESK2Q96S53 571 aa29.08■■■□□ 2.25
DDR1-255ENST00000504927 ATAD2Q6PL18 1390 aa29.08■■■□□ 2.25
DDR1-255ENST00000504927 USP47Q96K76 1375 aa29.08■■■□□ 2.25
DDR1-255ENST00000504927 TOPAZ1Q8N9V7 1692 aa29.08■■■□□ 2.25
DDR1-255ENST00000504927 ADAMTS2O95450 1211 aa29.06■■■□□ 2.24
DDR1-255ENST00000504927 TRPM3Q9HCF6 1732 aaPredicted RBP29.06■■■□□ 2.24
DDR1-255ENST00000504927 SOCS7O14512 581 aa29.05■■■□□ 2.24
DDR1-255ENST00000504927 PAK3O75914 559 aaPredicted RBP29.05■■■□□ 2.24
DDR1-255ENST00000504927 C8orf37Q96NL8 207 aa29.03■■■□□ 2.24
DDR1-255ENST00000504927 ZNF692Q9BU19 519 aaPredicted RBP29.03■■■□□ 2.24
DDR1-255ENST00000504927 BRD4O60885 1362 aaPredicted RBP29.01■■■□□ 2.24
DDR1-255ENST00000504927 AFF2P51816 1311 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms